RNA–Protein interactions for RNA: ENST00000514898.1

RUFY3-213, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 4

Gene RUFY3, Length 482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-213ENST00000514898 RUSC2Q8N2Y8 1516 aa41.42■■■■■ 4.22
RUFY3-213ENST00000514898 ABCC10Q5T3U5 1492 aa41.21■■■■■ 4.19
RUFY3-213ENST00000514898 MAPKBP1O60336 1514 aa41.18■■■■■ 4.18
RUFY3-213ENST00000514898 IGF1RP08069 1367 aa41.18■■■■■ 4.18
RUFY3-213ENST00000514898 ADCY10Q96PN6 1610 aa41.18■■■■■ 4.18
RUFY3-213ENST00000514898 KIAA0586Q9BVV6 1533 aa41.15■■■■■ 4.18
RUFY3-213ENST00000514898 FAM69CQ0P6D2 419 aa41.12■■■■■ 4.17
RUFY3-213ENST00000514898 DIP2BQ9P265 1576 aa41.09■■■■■ 4.17
RUFY3-213ENST00000514898 NPM1P06748 294 aaKnown RBP eCLIP41.06■■■■■ 4.16
RUFY3-213ENST00000514898 KIF27Q86VH2 1401 aa41.06■■■■■ 4.16
RUFY3-213ENST00000514898 CUL7Q14999 1698 aa41.05■■■■■ 4.16
RUFY3-213ENST00000514898 CARMIL1Q5VZK9 1371 aa40.85■■■■■ 4.13
RUFY3-213ENST00000514898 PTPRGP23470 1445 aa40.82■■■■■ 4.12
RUFY3-213ENST00000514898 KDM6BO15054 1643 aa40.78■■■■■ 4.12
RUFY3-213ENST00000514898 TSPOAP1O95153 1857 aa40.76■■■■■ 4.12
RUFY3-213ENST00000514898 TNIKQ9UKE5 1360 aa40.72■■■■■ 4.11
RUFY3-213ENST00000514898 ABCC2Q92887 1545 aa40.69■■■■■ 4.1
RUFY3-213ENST00000514898 CARMIL2Q6F5E8 1435 aa40.67■■■■■ 4.1
RUFY3-213ENST00000514898 IQGAP2Q13576 1575 aa40.66■■■■■ 4.1
RUFY3-213ENST00000514898 KDM4FA0A1W2PPD8 638 aa40.66■■■■■ 4.1
RUFY3-213ENST00000514898 TTBK1Q5TCY1 1321 aaPredicted RBP40.63■■■■■ 4.09
RUFY3-213ENST00000514898 UHRF1BP1LA0JNW5 1464 aa40.6■■■■■ 4.09
RUFY3-213ENST00000514898 ASXL2Q76L83 1435 aa40.59■■■■■ 4.09
RUFY3-213ENST00000514898 DISP1Q96F81 1524 aa40.59■■■■■ 4.09
RUFY3-213ENST00000514898 PPRC1Q5VV67 1664 aaKnown RBP40.56■■■■■ 4.08
RUFY3-213ENST00000514898 GLI2P10070 1586 aa40.56■■■■■ 4.08
RUFY3-213ENST00000514898 PLB1Q6P1J6 1458 aa40.55■■■■■ 4.08
RUFY3-213ENST00000514898 UACAQ9BZF9 1416 aa40.51■■■■■ 4.08
RUFY3-213ENST00000514898 UGGT2Q9NYU1 1516 aa40.45■■■■■ 4.07
RUFY3-213ENST00000514898 KDM5BQ9UGL1 1544 aa40.42■■■■■ 4.06
RUFY3-213ENST00000514898 RAPGEF2Q9Y4G8 1499 aa40.41■■■■■ 4.06
RUFY3-213ENST00000514898 EPRSP07814 1512 aaKnown RBP40.37■■■■■ 4.05
RUFY3-213ENST00000514898 COL17A1Q9UMD9 1497 aaPredicted RBP40.34■■■■■ 4.05
RUFY3-213ENST00000514898 KIAA0556O60303 1618 aa40.34■■■■■ 4.05
RUFY3-213ENST00000514898 MAP3K4Q9Y6R4 1608 aa40.32■■■■■ 4.05
RUFY3-213ENST00000514898 ZCCHC11Q5TAX3 1644 aaKnown RBP40.31■■■■■ 4.04
RUFY3-213ENST00000514898 ADGRL1O94910 1474 aa40.18■■■■■ 4.02
RUFY3-213ENST00000514898 TEX14Q8IWB6 1497 aa40.14■■■■■ 4.02
RUFY3-213ENST00000514898 WDR7Q9Y4E6 1490 aa40.12■■■■■ 4.01
RUFY3-213ENST00000514898 CTTNBP2Q8WZ74 1663 aa40.1■■■■■ 4.01
RUFY3-213ENST00000514898 ABCA8O94911 1581 aa40.02■■■■■ 4
RUFY3-213ENST00000514898 GOLGA3Q08378 1498 aa39.99■■■■□ 3.99
RUFY3-213ENST00000514898 PRXQ9BXM0 1461 aa39.97■■■■□ 3.99
RUFY3-213ENST00000514898 MAGI3Q5TCQ9 1506 aa39.94■■■■□ 3.98
RUFY3-213ENST00000514898 CFAP43Q8NDM7 1665 aa39.91■■■■□ 3.98
RUFY3-213ENST00000514898 CD109Q6YHK3 1445 aa39.9■■■■□ 3.98
RUFY3-213ENST00000514898 KCNH8Q96L42 1107 aa39.83■■■■□ 3.97
RUFY3-213ENST00000514898 ILDR1Q86SU0 546 aaPredicted RBP39.8■■■■□ 3.96
RUFY3-213ENST00000514898 HECW2Q9P2P5 1572 aa39.76■■■■□ 3.96
RUFY3-213ENST00000514898 ATP10BO94823 1461 aa39.68■■■■□ 3.94
RUFY3-213ENST00000514898 ARAP3Q8WWN8 1544 aa39.65■■■■□ 3.94
RUFY3-213ENST00000514898 P3H3Q8IVL6 736 aa39.6■■■■□ 3.93
RUFY3-213ENST00000514898 KIF21BO75037 1637 aa39.59■■■■□ 3.93
RUFY3-213ENST00000514898 ARID3CA6NKF2 412 aa39.59■■■■□ 3.93
RUFY3-213ENST00000514898 SAMD9Q5K651 1589 aa39.58■■■■□ 3.93
RUFY3-213ENST00000514898 ABCA9Q8IUA7 1624 aa39.55■■■■□ 3.92
RUFY3-213ENST00000514898 PHLDB1Q86UU1 1377 aa39.46■■■■□ 3.91
RUFY3-213ENST00000514898 CSRNP3Q8WYN3 585 aa39.46■■■■□ 3.91
RUFY3-213ENST00000514898 RAPGEF6Q8TEU7 1601 aa39.45■■■■□ 3.91
RUFY3-213ENST00000514898 FAM9AQ8IZU1 332 aaPredicted RBP39.44■■■■□ 3.9
RUFY3-213ENST00000514898 NEO1Q92859 1461 aa39.38■■■■□ 3.9
RUFY3-213ENST00000514898 NUP153P49790 1475 aaKnown RBP39.37■■■■□ 3.89
RUFY3-213ENST00000514898 RAPGEF3O95398 923 aa39.36■■■■□ 3.89
RUFY3-213ENST00000514898 ADAMTSL3P82987 1691 aa39.35■■■■□ 3.89
RUFY3-213ENST00000514898 FRMPD1Q5SYB0 1578 aa39.33■■■■□ 3.89
RUFY3-213ENST00000514898 PTPRMP28827 1452 aa39.29■■■■□ 3.88
RUFY3-213ENST00000514898 FHOD3Q2V2M9 1422 aa39.24■■■■□ 3.87
RUFY3-213ENST00000514898 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.23■■■■□ 3.87
RUFY3-213ENST00000514898 HNRNPUL2Q1KMD3 747 aaKnown RBP39.23■■■■□ 3.87
RUFY3-213ENST00000514898 BCORL1Q5H9F3 1711 aa39.2■■■■□ 3.87
RUFY3-213ENST00000514898 EEA1Q15075 1411 aa39.19■■■■□ 3.86
RUFY3-213ENST00000514898 RANGAP1P46060 587 aaPredicted RBP39.13■■■■□ 3.85
RUFY3-213ENST00000514898 MADDQ8WXG6 1647 aa39.12■■■■□ 3.85
RUFY3-213ENST00000514898 RICTORQ6R327 1708 aa39.11■■■■□ 3.85
RUFY3-213ENST00000514898 PLEKHD1A6NEE1 506 aa39.08■■■■□ 3.85
RUFY3-213ENST00000514898 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.08■■■■□ 3.85
RUFY3-213ENST00000514898 ARHGEF40Q8TER5 1519 aa39.08■■■■□ 3.85
RUFY3-213ENST00000514898 DENND4BO75064 1496 aaPredicted RBP39.07■■■■□ 3.85
RUFY3-213ENST00000514898 AKNAQ7Z591 1439 aa39.06■■■■□ 3.84
RUFY3-213ENST00000514898 FANCAO15360 1455 aa39.03■■■■□ 3.84
RUFY3-213ENST00000514898 ARID4BQ4LE39 1312 aaPredicted RBP39.02■■■■□ 3.84
RUFY3-213ENST00000514898 EFCAB5A4FU69 1503 aa39.02■■■■□ 3.84
RUFY3-213ENST00000514898 TTC37Q6PGP7 1564 aa39.01■■■■□ 3.84
RUFY3-213ENST00000514898 PCF11O94913 1555 aaKnown RBP38.99■■■■□ 3.83
RUFY3-213ENST00000514898 LMTK3Q96Q04 1460 aa38.98■■■■□ 3.83
RUFY3-213ENST00000514898 CFAP74Q9C0B2 1584 aa38.97■■■■□ 3.83
RUFY3-213ENST00000514898 ZMYM4Q5VZL5 1548 aa38.96■■■■□ 3.83
RUFY3-213ENST00000514898 FBXO41Q8TF61 875 aa38.95■■■■□ 3.83
RUFY3-213ENST00000514898 RIMS1Q86UR5 1692 aaKnown RBP38.94■■■■□ 3.82
RUFY3-213ENST00000514898 SIGLEC1Q9BZZ2 1709 aa38.93■■■■□ 3.82
RUFY3-213ENST00000514898 CDK13Q14004 1512 aaKnown RBP38.91■■■■□ 3.82
RUFY3-213ENST00000514898 YEATS2Q9ULM3 1422 aa38.89■■■■□ 3.82
RUFY3-213ENST00000514898 ZFYVE16Q7Z3T8 1539 aa38.84■■■■□ 3.81
RUFY3-213ENST00000514898 MAGI2Q86UL8 1455 aa38.83■■■■□ 3.81
RUFY3-213ENST00000514898 PLCH2O75038 1416 aa38.81■■■■□ 3.8
RUFY3-213ENST00000514898 HECW1Q76N89 1606 aa38.81■■■■□ 3.8
RUFY3-213ENST00000514898 POGZQ7Z3K3 1410 aa38.77■■■■□ 3.8
RUFY3-213ENST00000514898 SCAPERQ9BY12 1400 aa38.75■■■■□ 3.79
RUFY3-213ENST00000514898 HSPA2P54652 639 aa38.7■■■■□ 3.79
RUFY3-213ENST00000514898 ARHGAP35Q9NRY4 1499 aa38.68■■■■□ 3.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms