RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 PRG4Q92954 1404 aaPredicted RBP39.47■■■■□ 3.91
CLDND1-230ENST00000514537 RUSC2Q8N2Y8 1516 aa39.45■■■■□ 3.91
CLDND1-230ENST00000514537 TRHP20396 242 aaPredicted RBP39.42■■■■□ 3.9
CLDND1-230ENST00000514537 KIAA0586Q9BVV6 1533 aa39.4■■■■□ 3.9
CLDND1-230ENST00000514537 RAPGEF2Q9Y4G8 1499 aa39.17■■■■□ 3.86
CLDND1-230ENST00000514537 IQGAP2Q13576 1575 aa39.03■■■■□ 3.84
CLDND1-230ENST00000514537 CARMIL2Q6F5E8 1435 aa38.99■■■■□ 3.83
CLDND1-230ENST00000514537 PTPRGP23470 1445 aa38.95■■■■□ 3.83
CLDND1-230ENST00000514537 PRXQ9BXM0 1461 aa38.94■■■■□ 3.82
CLDND1-230ENST00000514537 TNIKQ9UKE5 1360 aa38.93■■■■□ 3.82
CLDND1-230ENST00000514537 NPM1P06748 294 aaKnown RBP eCLIP38.92■■■■□ 3.82
CLDND1-230ENST00000514537 ADCY10Q96PN6 1610 aa38.86■■■■□ 3.81
CLDND1-230ENST00000514537 DISP1Q96F81 1524 aa38.86■■■■□ 3.81
CLDND1-230ENST00000514537 UGGT2Q9NYU1 1516 aa38.85■■■■□ 3.81
CLDND1-230ENST00000514537 TTBK1Q5TCY1 1321 aaPredicted RBP38.84■■■■□ 3.81
CLDND1-230ENST00000514537 CSRNP3Q8WYN3 585 aa38.83■■■■□ 3.81
CLDND1-230ENST00000514537 MAPKBP1O60336 1514 aa38.75■■■■□ 3.79
CLDND1-230ENST00000514537 EEA1Q15075 1411 aa38.71■■■■□ 3.79
CLDND1-230ENST00000514537 ABCC10Q5T3U5 1492 aa38.67■■■■□ 3.78
CLDND1-230ENST00000514537 CTTNBP2Q8WZ74 1663 aa38.67■■■■□ 3.78
CLDND1-230ENST00000514537 KIAA0556O60303 1618 aa38.67■■■■□ 3.78
CLDND1-230ENST00000514537 UACAQ9BZF9 1416 aa38.66■■■■□ 3.78
CLDND1-230ENST00000514537 FAM69CQ0P6D2 419 aa38.66■■■■□ 3.78
CLDND1-230ENST00000514537 UHRF1BP1LA0JNW5 1464 aa38.65■■■■□ 3.78
CLDND1-230ENST00000514537 ABCC2Q92887 1545 aa38.63■■■■□ 3.78
CLDND1-230ENST00000514537 CHIC1Q5VXU3 224 aa38.61■■■■□ 3.77
CLDND1-230ENST00000514537 KIF13AQ9H1H9 1805 aa38.61■■■■□ 3.77
CLDND1-230ENST00000514537 GOLGA3Q08378 1498 aa38.6■■■■□ 3.77
CLDND1-230ENST00000514537 FAM9AQ8IZU1 332 aaPredicted RBP38.55■■■■□ 3.76
CLDND1-230ENST00000514537 DIP2BQ9P265 1576 aa38.52■■■■□ 3.76
CLDND1-230ENST00000514537 KDM5BQ9UGL1 1544 aa38.45■■■■□ 3.75
CLDND1-230ENST00000514537 ASXL2Q76L83 1435 aa38.45■■■■□ 3.75
CLDND1-230ENST00000514537 PLB1Q6P1J6 1458 aa38.43■■■■□ 3.74
CLDND1-230ENST00000514537 P3H3Q8IVL6 736 aa38.35■■■■□ 3.73
CLDND1-230ENST00000514537 ABCA8O94911 1581 aa38.31■■■■□ 3.72
CLDND1-230ENST00000514537 KIF21BO75037 1637 aa38.28■■■■□ 3.72
CLDND1-230ENST00000514537 ZCCHC11Q5TAX3 1644 aaKnown RBP38.28■■■■□ 3.72
CLDND1-230ENST00000514537 GLI2P10070 1586 aa38.25■■■■□ 3.71
CLDND1-230ENST00000514537 SAMD9Q5K651 1589 aa38.24■■■■□ 3.71
CLDND1-230ENST00000514537 EPRSP07814 1512 aaKnown RBP38.22■■■■□ 3.71
CLDND1-230ENST00000514537 RANGAP1P46060 587 aaPredicted RBP38.19■■■■□ 3.7
CLDND1-230ENST00000514537 WDR7Q9Y4E6 1490 aa38.15■■■■□ 3.7
CLDND1-230ENST00000514537 TSPOAP1O95153 1857 aa38.14■■■■□ 3.7
CLDND1-230ENST00000514537 UBTFP17480 764 aaKnown RBP38.08■■■■□ 3.69
CLDND1-230ENST00000514537 EHMT2Q96KQ7 1210 aa38.07■■■■□ 3.68
CLDND1-230ENST00000514537 FHOD3Q2V2M9 1422 aa38.05■■■■□ 3.68
CLDND1-230ENST00000514537 ATP10BO94823 1461 aa38.05■■■■□ 3.68
CLDND1-230ENST00000514537 ARID3CA6NKF2 412 aa38.04■■■■□ 3.68
CLDND1-230ENST00000514537 KDM6BO15054 1643 aa38.02■■■■□ 3.68
CLDND1-230ENST00000514537 KCNH8Q96L42 1107 aa38.02■■■■□ 3.68
CLDND1-230ENST00000514537 PPRC1Q5VV67 1664 aaKnown RBP38.01■■■■□ 3.68
CLDND1-230ENST00000514537 MAP3K4Q9Y6R4 1608 aa38.01■■■■□ 3.67
CLDND1-230ENST00000514537 EFCAB5A4FU69 1503 aa37.99■■■■□ 3.67
CLDND1-230ENST00000514537 RAPGEF6Q8TEU7 1601 aa37.97■■■■□ 3.67
CLDND1-230ENST00000514537 TEX14Q8IWB6 1497 aa37.92■■■■□ 3.66
CLDND1-230ENST00000514537 NUP153P49790 1475 aaKnown RBP37.9■■■■□ 3.66
CLDND1-230ENST00000514537 CD109Q6YHK3 1445 aa37.89■■■■□ 3.66
CLDND1-230ENST00000514537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.86■■■■□ 3.65
CLDND1-230ENST00000514537 HNRNPUL2Q1KMD3 747 aaKnown RBP37.86■■■■□ 3.65
CLDND1-230ENST00000514537 MAGI3Q5TCQ9 1506 aa37.83■■■■□ 3.65
CLDND1-230ENST00000514537 COL17A1Q9UMD9 1497 aaPredicted RBP37.83■■■■□ 3.65
CLDND1-230ENST00000514537 AEBP2Q6ZN18 517 aaPredicted RBP37.8■■■■□ 3.64
CLDND1-230ENST00000514537 CFAP43Q8NDM7 1665 aa37.79■■■■□ 3.64
CLDND1-230ENST00000514537 ARHGAP35Q9NRY4 1499 aa37.77■■■■□ 3.64
CLDND1-230ENST00000514537 PLEKHD1A6NEE1 506 aa37.71■■■■□ 3.63
CLDND1-230ENST00000514537 FMN1Q68DA7 1419 aa37.7■■■■□ 3.62
CLDND1-230ENST00000514537 ABCA9Q8IUA7 1624 aa37.65■■■■□ 3.62
CLDND1-230ENST00000514537 ATP1B4Q9UN42 357 aaPredicted RBP37.57■■■■□ 3.6
CLDND1-230ENST00000514537 PHLDB1Q86UU1 1377 aa37.55■■■■□ 3.6
CLDND1-230ENST00000514537 CDK13Q14004 1512 aaKnown RBP37.54■■■■□ 3.6
CLDND1-230ENST00000514537 KDM4FA0A1W2PPD8 638 aa37.53■■■■□ 3.6
CLDND1-230ENST00000514537 ARAP3Q8WWN8 1544 aa37.51■■■■□ 3.6
CLDND1-230ENST00000514537 HECW1Q76N89 1606 aa37.49■■■■□ 3.59
CLDND1-230ENST00000514537 NEO1Q92859 1461 aa37.46■■■■□ 3.59
CLDND1-230ENST00000514537 CDK11AQ9UQ88 783 aaPredicted RBP37.43■■■■□ 3.58
CLDND1-230ENST00000514537 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.42■■■■□ 3.58
CLDND1-230ENST00000514537 CLIP1P30622 1438 aa37.38■■■■□ 3.57
CLDND1-230ENST00000514537 CASKIN1Q8WXD9 1431 aa37.36■■■■□ 3.57
CLDND1-230ENST00000514537 RAPGEF3O95398 923 aa37.35■■■■□ 3.57
CLDND1-230ENST00000514537 TTC37Q6PGP7 1564 aa37.32■■■■□ 3.56
CLDND1-230ENST00000514537 FANCAO15360 1455 aa37.29■■■■□ 3.56
CLDND1-230ENST00000514537 TROQ12816 1431 aaPredicted RBP37.28■■■■□ 3.56
CLDND1-230ENST00000514537 AKNAQ7Z591 1439 aa37.28■■■■□ 3.56
CLDND1-230ENST00000514537 ADGRL1O94910 1474 aa37.28■■■■□ 3.56
CLDND1-230ENST00000514537 PLCH2O75038 1416 aa37.27■■■■□ 3.56
CLDND1-230ENST00000514537 PCF11O94913 1555 aaKnown RBP37.25■■■■□ 3.55
CLDND1-230ENST00000514537 LRRIQ1Q96JM4 1722 aa37.22■■■■□ 3.55
CLDND1-230ENST00000514537 CCDC18Q5T9S5 1454 aa37.21■■■■□ 3.55
CLDND1-230ENST00000514537 DENND4BO75064 1496 aaPredicted RBP37.2■■■■□ 3.55
CLDND1-230ENST00000514537 FYCO1Q9BQS8 1478 aa37.19■■■■□ 3.54
CLDND1-230ENST00000514537 CFAP74Q9C0B2 1584 aa37.18■■■■□ 3.54
CLDND1-230ENST00000514537 FRMPD1Q5SYB0 1578 aa37.17■■■■□ 3.54
CLDND1-230ENST00000514537 KIF14Q15058 1648 aa37.15■■■■□ 3.54
CLDND1-230ENST00000514537 EFCAB2Q5VUJ9 269 aa37.14■■■■□ 3.54
CLDND1-230ENST00000514537 CEP162Q5TB80 1403 aa37.09■■■■□ 3.53
CLDND1-230ENST00000514537 SCAPERQ9BY12 1400 aa37.07■■■■□ 3.52
CLDND1-230ENST00000514537 RICTORQ6R327 1708 aa37.05■■■■□ 3.52
CLDND1-230ENST00000514537 LOC105371045A0A1W2PR82 267 aa37.04■■■■□ 3.52
CLDND1-230ENST00000514537 MYO5CQ9NQX4 1742 aa37.04■■■■□ 3.52
CLDND1-230ENST00000514537 POGZQ7Z3K3 1410 aa36.98■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms