RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 PRG4Q92954 1404 aaPredicted RBP16.8■□□□□ 0.28
NEDD9-214ENST00000513989 KIF27Q86VH2 1401 aa16.79■□□□□ 0.28
NEDD9-214ENST00000513989 CUL7Q14999 1698 aa16.78■□□□□ 0.28
NEDD9-214ENST00000513989 JPH4Q96JJ6 628 aa16.76■□□□□ 0.27
NEDD9-214ENST00000513989 IGF1RP08069 1367 aa16.76■□□□□ 0.27
NEDD9-214ENST00000513989 ADCY10Q96PN6 1610 aa16.73■□□□□ 0.27
NEDD9-214ENST00000513989 FAM9AQ8IZU1 332 aaPredicted RBP16.71■□□□□ 0.27
NEDD9-214ENST00000513989 KIAA0586Q9BVV6 1533 aa16.7■□□□□ 0.26
NEDD9-214ENST00000513989 CSRNP3Q8WYN3 585 aa16.7■□□□□ 0.26
NEDD9-214ENST00000513989 EEA1Q15075 1411 aa16.7■□□□□ 0.26
NEDD9-214ENST00000513989 MAPKBP1O60336 1514 aa16.65■□□□□ 0.26
NEDD9-214ENST00000513989 DIP2BQ9P265 1576 aa16.64■□□□□ 0.25
NEDD9-214ENST00000513989 ABCC10Q5T3U5 1492 aa16.62■□□□□ 0.25
NEDD9-214ENST00000513989 CARMIL1Q5VZK9 1371 aa16.61■□□□□ 0.25
NEDD9-214ENST00000513989 IQGAP2Q13576 1575 aa16.58■□□□□ 0.24
NEDD9-214ENST00000513989 TSPOAP1O95153 1857 aa16.57■□□□□ 0.24
NEDD9-214ENST00000513989 FAM69CQ0P6D2 419 aa16.53■□□□□ 0.24
NEDD9-214ENST00000513989 DISP1Q96F81 1524 aa16.53■□□□□ 0.24
NEDD9-214ENST00000513989 PTPRGP23470 1445 aa16.51■□□□□ 0.23
NEDD9-214ENST00000513989 PPRC1Q5VV67 1664 aaKnown RBP16.5■□□□□ 0.23
NEDD9-214ENST00000513989 ABCC2Q92887 1545 aa16.49■□□□□ 0.23
NEDD9-214ENST00000513989 TNIKQ9UKE5 1360 aa16.49■□□□□ 0.23
NEDD9-214ENST00000513989 RAPGEF2Q9Y4G8 1499 aa16.48■□□□□ 0.23
NEDD9-214ENST00000513989 NPM1P06748 294 aaKnown RBP eCLIP16.48■□□□□ 0.23
NEDD9-214ENST00000513989 CTTNBP2Q8WZ74 1663 aa16.48■□□□□ 0.23
NEDD9-214ENST00000513989 UGGT2Q9NYU1 1516 aa16.48■□□□□ 0.23
NEDD9-214ENST00000513989 CARMIL2Q6F5E8 1435 aa16.47■□□□□ 0.23
NEDD9-214ENST00000513989 UBTFP17480 764 aaKnown RBP16.47■□□□□ 0.23
NEDD9-214ENST00000513989 PRXQ9BXM0 1461 aa16.47■□□□□ 0.23
NEDD9-214ENST00000513989 KDM6BO15054 1643 aa16.46■□□□□ 0.23
NEDD9-214ENST00000513989 KIAA0556O60303 1618 aa16.46■□□□□ 0.23
NEDD9-214ENST00000513989 UHRF1BP1LA0JNW5 1464 aa16.46■□□□□ 0.23
NEDD9-214ENST00000513989 EHMT2Q96KQ7 1210 aa16.45■□□□□ 0.22
NEDD9-214ENST00000513989 TTBK1Q5TCY1 1321 aaPredicted RBP16.43■□□□□ 0.22
NEDD9-214ENST00000513989 GLI2P10070 1586 aa16.43■□□□□ 0.22
NEDD9-214ENST00000513989 ZCCHC11Q5TAX3 1644 aaKnown RBP16.42■□□□□ 0.22
NEDD9-214ENST00000513989 ASXL2Q76L83 1435 aa16.42■□□□□ 0.22
NEDD9-214ENST00000513989 UACAQ9BZF9 1416 aa16.42■□□□□ 0.22
NEDD9-214ENST00000513989 KDM5BQ9UGL1 1544 aa16.4■□□□□ 0.22
NEDD9-214ENST00000513989 MAP3K4Q9Y6R4 1608 aa16.38■□□□□ 0.21
NEDD9-214ENST00000513989 PLB1Q6P1J6 1458 aa16.38■□□□□ 0.21
NEDD9-214ENST00000513989 LOC105371045A0A1W2PR82 267 aa16.38■□□□□ 0.21
NEDD9-214ENST00000513989 GOLGA3Q08378 1498 aa16.37■□□□□ 0.21
NEDD9-214ENST00000513989 EPRSP07814 1512 aaKnown RBP16.35■□□□□ 0.21
NEDD9-214ENST00000513989 KIF21BO75037 1637 aa16.33■□□□□ 0.2
NEDD9-214ENST00000513989 ABCA8O94911 1581 aa16.32■□□□□ 0.2
NEDD9-214ENST00000513989 COL17A1Q9UMD9 1497 aaPredicted RBP16.3■□□□□ 0.2
NEDD9-214ENST00000513989 KDM4FA0A1W2PPD8 638 aa16.27■□□□□ 0.2
NEDD9-214ENST00000513989 RANGAP1P46060 587 aaPredicted RBP16.27■□□□□ 0.2
NEDD9-214ENST00000513989 WDR7Q9Y4E6 1490 aa16.25■□□□□ 0.19
NEDD9-214ENST00000513989 CFAP43Q8NDM7 1665 aa16.24■□□□□ 0.19
NEDD9-214ENST00000513989 SAMD9Q5K651 1589 aa16.21■□□□□ 0.19
NEDD9-214ENST00000513989 TEX14Q8IWB6 1497 aa16.2■□□□□ 0.18
NEDD9-214ENST00000513989 MAGI3Q5TCQ9 1506 aa16.16■□□□□ 0.18
NEDD9-214ENST00000513989 P3H3Q8IVL6 736 aa16.16■□□□□ 0.18
NEDD9-214ENST00000513989 ADGRL1O94910 1474 aa16.16■□□□□ 0.18
NEDD9-214ENST00000513989 ATP10BO94823 1461 aa16.13■□□□□ 0.17
NEDD9-214ENST00000513989 RAPGEF6Q8TEU7 1601 aa16.12■□□□□ 0.17
NEDD9-214ENST00000513989 CLIP1P30622 1438 aa16.12■□□□□ 0.17
NEDD9-214ENST00000513989 CD109Q6YHK3 1445 aa16.12■□□□□ 0.17
NEDD9-214ENST00000513989 ABCA9Q8IUA7 1624 aa16.11■□□□□ 0.17
NEDD9-214ENST00000513989 CEP162Q5TB80 1403 aa16.1■□□□□ 0.17
NEDD9-214ENST00000513989 KCNH8Q96L42 1107 aa16.08■□□□□ 0.16
NEDD9-214ENST00000513989 ARID3CA6NKF2 412 aa16.06■□□□□ 0.16
NEDD9-214ENST00000513989 NUP153P49790 1475 aaKnown RBP16.05■□□□□ 0.16
NEDD9-214ENST00000513989 EFCAB5A4FU69 1503 aa16.04■□□□□ 0.16
NEDD9-214ENST00000513989 ARAP3Q8WWN8 1544 aa16.04■□□□□ 0.16
NEDD9-214ENST00000513989 FHOD3Q2V2M9 1422 aa16.02■□□□□ 0.16
NEDD9-214ENST00000513989 ARHGAP35Q9NRY4 1499 aa16.02■□□□□ 0.15
NEDD9-214ENST00000513989 ATP1B4Q9UN42 357 aaPredicted RBP16.01■□□□□ 0.15
NEDD9-214ENST00000513989 FMN1Q68DA7 1419 aa16.01■□□□□ 0.15
NEDD9-214ENST00000513989 FRMPD1Q5SYB0 1578 aa16■□□□□ 0.15
NEDD9-214ENST00000513989 HECW2Q9P2P5 1572 aa15.98■□□□□ 0.15
NEDD9-214ENST00000513989 APLP2Q06481 763 aa15.95■□□□□ 0.14
NEDD9-214ENST00000513989 SENP3Q9H4L4 574 aaPredicted RBP15.95■□□□□ 0.14
NEDD9-214ENST00000513989 RICTORQ6R327 1708 aa15.94■□□□□ 0.14
NEDD9-214ENST00000513989 NEO1Q92859 1461 aa15.94■□□□□ 0.14
NEDD9-214ENST00000513989 ADAMTSL3P82987 1691 aa15.94■□□□□ 0.14
NEDD9-214ENST00000513989 TTC37Q6PGP7 1564 aa15.93■□□□□ 0.14
NEDD9-214ENST00000513989 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.92■□□□□ 0.14
NEDD9-214ENST00000513989 HNRNPUL2Q1KMD3 747 aaKnown RBP15.92■□□□□ 0.14
NEDD9-214ENST00000513989 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.92■□□□□ 0.14
NEDD9-214ENST00000513989 PHLDB1Q86UU1 1377 aa15.91■□□□□ 0.14
NEDD9-214ENST00000513989 LRRIQ1Q96JM4 1722 aa15.91■□□□□ 0.14
NEDD9-214ENST00000513989 BCORL1Q5H9F3 1711 aa15.9■□□□□ 0.14
NEDD9-214ENST00000513989 CDK13Q14004 1512 aaKnown RBP15.89■□□□□ 0.13
NEDD9-214ENST00000513989 SIGLEC1Q9BZZ2 1709 aa15.89■□□□□ 0.13
NEDD9-214ENST00000513989 VPS8Q8N3P4 1428 aa15.89■□□□□ 0.13
NEDD9-214ENST00000513989 RAPGEF3O95398 923 aa15.89■□□□□ 0.13
NEDD9-214ENST00000513989 CDK11AQ9UQ88 783 aaPredicted RBP15.89■□□□□ 0.13
NEDD9-214ENST00000513989 CASKIN1Q8WXD9 1431 aa15.87■□□□□ 0.13
NEDD9-214ENST00000513989 ARHGEF40Q8TER5 1519 aa15.87■□□□□ 0.13
NEDD9-214ENST00000513989 CFAP74Q9C0B2 1584 aa15.87■□□□□ 0.13
NEDD9-214ENST00000513989 MADDQ8WXG6 1647 aa15.85■□□□□ 0.13
NEDD9-214ENST00000513989 PLEKHD1A6NEE1 506 aa15.84■□□□□ 0.13
NEDD9-214ENST00000513989 FANCAO15360 1455 aa15.84■□□□□ 0.13
NEDD9-214ENST00000513989 AKNAQ7Z591 1439 aa15.83■□□□□ 0.12
NEDD9-214ENST00000513989 ZMYM4Q5VZL5 1548 aa15.83■□□□□ 0.12
NEDD9-214ENST00000513989 HECW1Q76N89 1606 aa15.83■□□□□ 0.12
NEDD9-214ENST00000513989 PTPRMP28827 1452 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms