RNA–Protein interactions for RNA: ENST00000513942.5

SGCA-210, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-210ENST00000513942 JPH4Q96JJ6 628 aa26.19■■□□□ 1.78
SGCA-210ENST00000513942 ABCC10Q5T3U5 1492 aa26.13■■□□□ 1.77
SGCA-210ENST00000513942 MAPKBP1O60336 1514 aa26.13■■□□□ 1.77
SGCA-210ENST00000513942 DIP2BQ9P265 1576 aa26.11■■□□□ 1.77
SGCA-210ENST00000513942 ADCY10Q96PN6 1610 aa26.1■■□□□ 1.77
SGCA-210ENST00000513942 FAM69CQ0P6D2 419 aa26.08■■□□□ 1.77
SGCA-210ENST00000513942 NPM1P06748 294 aaKnown RBP eCLIP26.06■■□□□ 1.76
SGCA-210ENST00000513942 KDM6BO15054 1643 aa25.99■■□□□ 1.75
SGCA-210ENST00000513942 KIAA0586Q9BVV6 1533 aa25.98■■□□□ 1.75
SGCA-210ENST00000513942 CUL7Q14999 1698 aa25.98■■□□□ 1.75
SGCA-210ENST00000513942 TSPOAP1O95153 1857 aa25.97■■□□□ 1.75
SGCA-210ENST00000513942 IGF1RP08069 1367 aa25.9■■□□□ 1.74
SGCA-210ENST00000513942 KIF27Q86VH2 1401 aa25.89■■□□□ 1.74
SGCA-210ENST00000513942 PTPRGP23470 1445 aa25.8■■□□□ 1.72
SGCA-210ENST00000513942 KDM4FA0A1W2PPD8 638 aa25.8■■□□□ 1.72
SGCA-210ENST00000513942 ABCC2Q92887 1545 aa25.77■■□□□ 1.72
SGCA-210ENST00000513942 CARMIL2Q6F5E8 1435 aa25.74■■□□□ 1.71
SGCA-210ENST00000513942 TTBK1Q5TCY1 1321 aaPredicted RBP25.74■■□□□ 1.71
SGCA-210ENST00000513942 TNIKQ9UKE5 1360 aa25.73■■□□□ 1.71
SGCA-210ENST00000513942 PPRC1Q5VV67 1664 aaKnown RBP25.73■■□□□ 1.71
SGCA-210ENST00000513942 IQGAP2Q13576 1575 aa25.73■■□□□ 1.71
SGCA-210ENST00000513942 CARMIL1Q5VZK9 1371 aa25.72■■□□□ 1.71
SGCA-210ENST00000513942 GLI2P10070 1586 aa25.7■■□□□ 1.71
SGCA-210ENST00000513942 ASXL2Q76L83 1435 aa25.7■■□□□ 1.7
SGCA-210ENST00000513942 PLB1Q6P1J6 1458 aa25.69■■□□□ 1.7
SGCA-210ENST00000513942 UHRF1BP1LA0JNW5 1464 aa25.66■■□□□ 1.7
SGCA-210ENST00000513942 UACAQ9BZF9 1416 aa25.62■■□□□ 1.69
SGCA-210ENST00000513942 DISP1Q96F81 1524 aa25.6■■□□□ 1.69
SGCA-210ENST00000513942 MAP3K4Q9Y6R4 1608 aa25.58■■□□□ 1.69
SGCA-210ENST00000513942 ADGRL1O94910 1474 aa25.58■■□□□ 1.69
SGCA-210ENST00000513942 EPRSP07814 1512 aaKnown RBP25.56■■□□□ 1.68
SGCA-210ENST00000513942 KDM5BQ9UGL1 1544 aa25.55■■□□□ 1.68
SGCA-210ENST00000513942 ZCCHC11Q5TAX3 1644 aaKnown RBP25.55■■□□□ 1.68
SGCA-210ENST00000513942 UGGT2Q9NYU1 1516 aa25.53■■□□□ 1.68
SGCA-210ENST00000513942 KIAA0556O60303 1618 aa25.52■■□□□ 1.68
SGCA-210ENST00000513942 COL17A1Q9UMD9 1497 aaPredicted RBP25.51■■□□□ 1.67
SGCA-210ENST00000513942 TEX14Q8IWB6 1497 aa25.5■■□□□ 1.67
SGCA-210ENST00000513942 RAPGEF2Q9Y4G8 1499 aa25.47■■□□□ 1.67
SGCA-210ENST00000513942 ILDR1Q86SU0 546 aaPredicted RBP25.43■■□□□ 1.66
SGCA-210ENST00000513942 WDR7Q9Y4E6 1490 aa25.4■■□□□ 1.66
SGCA-210ENST00000513942 CTTNBP2Q8WZ74 1663 aa25.39■■□□□ 1.66
SGCA-210ENST00000513942 HECW2Q9P2P5 1572 aa25.38■■□□□ 1.65
SGCA-210ENST00000513942 CFAP43Q8NDM7 1665 aa25.33■■□□□ 1.65
SGCA-210ENST00000513942 CHIC1Q5VXU3 224 aa25.29■■□□□ 1.64
SGCA-210ENST00000513942 MAGI3Q5TCQ9 1506 aa25.28■■□□□ 1.64
SGCA-210ENST00000513942 ABCA8O94911 1581 aa25.28■■□□□ 1.64
SGCA-210ENST00000513942 GOLGA3Q08378 1498 aa25.28■■□□□ 1.64
SGCA-210ENST00000513942 CD109Q6YHK3 1445 aa25.26■■□□□ 1.63
SGCA-210ENST00000513942 KIF21BO75037 1637 aa25.2■■□□□ 1.62
SGCA-210ENST00000513942 KCNH8Q96L42 1107 aa25.19■■□□□ 1.62
SGCA-210ENST00000513942 PRXQ9BXM0 1461 aa25.11■■□□□ 1.61
SGCA-210ENST00000513942 ARAP3Q8WWN8 1544 aa25.09■■□□□ 1.61
SGCA-210ENST00000513942 ABCA9Q8IUA7 1624 aa25.05■■□□□ 1.6
SGCA-210ENST00000513942 ARID3CA6NKF2 412 aa25.03■■□□□ 1.6
SGCA-210ENST00000513942 ATP10BO94823 1461 aa25.02■■□□□ 1.6
SGCA-210ENST00000513942 ADAMTSL3P82987 1691 aa24.99■■□□□ 1.59
SGCA-210ENST00000513942 FAM9AQ8IZU1 332 aaPredicted RBP24.98■■□□□ 1.59
SGCA-210ENST00000513942 SAMD9Q5K651 1589 aa24.97■■□□□ 1.59
SGCA-210ENST00000513942 PHLDB1Q86UU1 1377 aa24.96■■□□□ 1.59
SGCA-210ENST00000513942 P3H3Q8IVL6 736 aa24.96■■□□□ 1.59
SGCA-210ENST00000513942 RAPGEF6Q8TEU7 1601 aa24.96■■□□□ 1.59
SGCA-210ENST00000513942 PTPRMP28827 1452 aa24.94■■□□□ 1.58
SGCA-210ENST00000513942 NEO1Q92859 1461 aa24.92■■□□□ 1.58
SGCA-210ENST00000513942 FRMPD1Q5SYB0 1578 aa24.91■■□□□ 1.58
SGCA-210ENST00000513942 BCORL1Q5H9F3 1711 aa24.9■■□□□ 1.58
SGCA-210ENST00000513942 RAPGEF3O95398 923 aa24.88■■□□□ 1.57
SGCA-210ENST00000513942 MADDQ8WXG6 1647 aa24.87■■□□□ 1.57
SGCA-210ENST00000513942 FBXO41Q8TF61 875 aa24.85■■□□□ 1.57
SGCA-210ENST00000513942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.83■■□□□ 1.57
SGCA-210ENST00000513942 HNRNPUL2Q1KMD3 747 aaKnown RBP24.83■■□□□ 1.57
SGCA-210ENST00000513942 NUP153P49790 1475 aaKnown RBP24.83■■□□□ 1.56
SGCA-210ENST00000513942 PCF11O94913 1555 aaKnown RBP24.82■■□□□ 1.56
SGCA-210ENST00000513942 ARHGEF40Q8TER5 1519 aa24.81■■□□□ 1.56
SGCA-210ENST00000513942 RICTORQ6R327 1708 aa24.79■■□□□ 1.56
SGCA-210ENST00000513942 ARID4BQ4LE39 1312 aaPredicted RBP24.79■■□□□ 1.56
SGCA-210ENST00000513942 RIMS1Q86UR5 1692 aaKnown RBP24.78■■□□□ 1.56
SGCA-210ENST00000513942 LMTK3Q96Q04 1460 aa24.77■■□□□ 1.56
SGCA-210ENST00000513942 CSRNP3Q8WYN3 585 aa24.76■■□□□ 1.55
SGCA-210ENST00000513942 CFAP74Q9C0B2 1584 aa24.76■■□□□ 1.55
SGCA-210ENST00000513942 FHOD3Q2V2M9 1422 aa24.74■■□□□ 1.55
SGCA-210ENST00000513942 DENND4BO75064 1496 aaPredicted RBP24.74■■□□□ 1.55
SGCA-210ENST00000513942 FANCAO15360 1455 aa24.7■■□□□ 1.55
SGCA-210ENST00000513942 AKNAQ7Z591 1439 aa24.69■■□□□ 1.54
SGCA-210ENST00000513942 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.69■■□□□ 1.54
SGCA-210ENST00000513942 TTC37Q6PGP7 1564 aa24.68■■□□□ 1.54
SGCA-210ENST00000513942 ZMYM4Q5VZL5 1548 aa24.68■■□□□ 1.54
SGCA-210ENST00000513942 RANGAP1P46060 587 aaPredicted RBP24.68■■□□□ 1.54
SGCA-210ENST00000513942 PLEKHD1A6NEE1 506 aa24.67■■□□□ 1.54
SGCA-210ENST00000513942 SIGLEC1Q9BZZ2 1709 aa24.65■■□□□ 1.54
SGCA-210ENST00000513942 EFCAB5A4FU69 1503 aa24.65■■□□□ 1.54
SGCA-210ENST00000513942 ZFYVE16Q7Z3T8 1539 aa24.65■■□□□ 1.54
SGCA-210ENST00000513942 EEA1Q15075 1411 aa24.63■■□□□ 1.53
SGCA-210ENST00000513942 POGZQ7Z3K3 1410 aa24.62■■□□□ 1.53
SGCA-210ENST00000513942 FER1L4A9Z1Z3 1794 aa24.6■■□□□ 1.53
SGCA-210ENST00000513942 YEATS2Q9ULM3 1422 aa24.6■■□□□ 1.53
SGCA-210ENST00000513942 HECW1Q76N89 1606 aa24.58■■□□□ 1.53
SGCA-210ENST00000513942 MAGI2Q86UL8 1455 aa24.58■■□□□ 1.52
SGCA-210ENST00000513942 HSPA2P54652 639 aa24.57■■□□□ 1.52
SGCA-210ENST00000513942 PLPPR3Q6T4P5 718 aa24.57■■□□□ 1.52
SGCA-210ENST00000513942 CDK13Q14004 1512 aaKnown RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms