RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 TSPOAP1O95153 1857 aa22.6■■□□□ 1.21
SFXN1-210ENST00000513725 CUX1P39880 1505 aa22.56■■□□□ 1.2
SFXN1-210ENST00000513725 PRG4Q92954 1404 aaPredicted RBP22.54■■□□□ 1.2
SFXN1-210ENST00000513725 ABCA5Q8WWZ7 1642 aa22.53■■□□□ 1.2
SFXN1-210ENST00000513725 ABCA10Q8WWZ4 1543 aa22.47■■□□□ 1.19
SFXN1-210ENST00000513725 ADAMTS12P58397 1594 aa22.46■■□□□ 1.19
SFXN1-210ENST00000513725 SOCS7O14512 581 aa22.44■■□□□ 1.18
SFXN1-210ENST00000513725 JPH4Q96JJ6 628 aa22.43■■□□□ 1.18
SFXN1-210ENST00000513725 ADCY10Q96PN6 1610 aa22.41■■□□□ 1.18
SFXN1-210ENST00000513725 FHAD1B1AJZ9 1412 aa22.39■■□□□ 1.17
SFXN1-210ENST00000513725 TOP2BQ02880 1626 aa22.28■■□□□ 1.16
SFXN1-210ENST00000513725 ILDR2Q71H61 639 aa22.28■■□□□ 1.16
SFXN1-210ENST00000513725 PPRC1Q5VV67 1664 aaKnown RBP22.25■■□□□ 1.15
SFXN1-210ENST00000513725 DISP3Q9P2K9 1392 aa22.23■■□□□ 1.15
SFXN1-210ENST00000513725 COL17A1Q9UMD9 1497 aaPredicted RBP22.22■■□□□ 1.15
SFXN1-210ENST00000513725 GLI2P10070 1586 aa22.21■■□□□ 1.15
SFXN1-210ENST00000513725 ERICH3Q5RHP9 1530 aa22.18■■□□□ 1.14
SFXN1-210ENST00000513725 RUSC2Q8N2Y8 1516 aa22.17■■□□□ 1.14
SFXN1-210ENST00000513725 WRNQ14191 1432 aaPredicted RBP eCLIP22.17■■□□□ 1.14
SFXN1-210ENST00000513725 PLB1Q6P1J6 1458 aa22.14■■□□□ 1.13
SFXN1-210ENST00000513725 ASXL2Q76L83 1435 aa22.12■■□□□ 1.13
SFXN1-210ENST00000513725 TEX14Q8IWB6 1497 aa22.11■■□□□ 1.13
SFXN1-210ENST00000513725 ABCC2Q92887 1545 aa22.06■■□□□ 1.12
SFXN1-210ENST00000513725 PTPRGP23470 1445 aa22.03■■□□□ 1.12
SFXN1-210ENST00000513725 MAP3K4Q9Y6R4 1608 aa22.02■■□□□ 1.11
SFXN1-210ENST00000513725 EPRSP07814 1512 aaKnown RBP21.97■■□□□ 1.11
SFXN1-210ENST00000513725 TTBK1Q5TCY1 1321 aaPredicted RBP21.97■■□□□ 1.11
SFXN1-210ENST00000513725 KIAA0586Q9BVV6 1533 aa21.96■■□□□ 1.11
SFXN1-210ENST00000513725 CERKQ8TCT0 537 aa21.96■■□□□ 1.11
SFXN1-210ENST00000513725 CUL7Q14999 1698 aa21.94■■□□□ 1.1
SFXN1-210ENST00000513725 PTPRMP28827 1452 aa21.93■■□□□ 1.1
SFXN1-210ENST00000513725 PCF11O94913 1555 aaKnown RBP21.91■■□□□ 1.1
SFXN1-210ENST00000513725 KIF21BO75037 1637 aa21.9■■□□□ 1.1
SFXN1-210ENST00000513725 SPATA31D1Q6ZQQ2 1576 aa21.89■■□□□ 1.09
SFXN1-210ENST00000513725 UHRF1BP1LA0JNW5 1464 aa21.88■■□□□ 1.09
SFXN1-210ENST00000513725 TNIKQ9UKE5 1360 aa21.87■■□□□ 1.09
SFXN1-210ENST00000513725 BIVM-ERCC5R4GMW8 1640 aa21.87■■□□□ 1.09
SFXN1-210ENST00000513725 CARMIL2Q6F5E8 1435 aa21.83■■□□□ 1.09
SFXN1-210ENST00000513725 UACAQ9BZF9 1416 aa21.81■■□□□ 1.08
SFXN1-210ENST00000513725 ADAMTSL3P82987 1691 aa21.8■■□□□ 1.08
SFXN1-210ENST00000513725 KDM5BQ9UGL1 1544 aa21.78■■□□□ 1.08
SFXN1-210ENST00000513725 MAGI3Q5TCQ9 1506 aa21.75■■□□□ 1.07
SFXN1-210ENST00000513725 CD109Q6YHK3 1445 aa21.72■■□□□ 1.07
SFXN1-210ENST00000513725 ZCCHC11Q5TAX3 1644 aaKnown RBP21.72■■□□□ 1.07
SFXN1-210ENST00000513725 HSPA2P54652 639 aa21.71■■□□□ 1.07
SFXN1-210ENST00000513725 WDR7Q9Y4E6 1490 aa21.69■■□□□ 1.06
SFXN1-210ENST00000513725 CFAP43Q8NDM7 1665 aa21.66■■□□□ 1.06
SFXN1-210ENST00000513725 MADDQ8WXG6 1647 aa21.65■■□□□ 1.06
SFXN1-210ENST00000513725 BCORL1Q5H9F3 1711 aa21.63■■□□□ 1.05
SFXN1-210ENST00000513725 ARAP3Q8WWN8 1544 aa21.61■■□□□ 1.05
SFXN1-210ENST00000513725 ARID4BQ4LE39 1312 aaPredicted RBP21.6■■□□□ 1.05
SFXN1-210ENST00000513725 IGF1RP08069 1367 aa21.59■■□□□ 1.05
SFXN1-210ENST00000513725 KCNH8Q96L42 1107 aa21.58■■□□□ 1.05
SFXN1-210ENST00000513725 IQGAP2Q13576 1575 aa21.56■■□□□ 1.04
SFXN1-210ENST00000513725 RIMS1Q86UR5 1692 aaKnown RBP21.53■■□□□ 1.04
SFXN1-210ENST00000513725 DISP1Q96F81 1524 aa21.53■■□□□ 1.04
SFXN1-210ENST00000513725 PLPPR3Q6T4P5 718 aa21.5■■□□□ 1.03
SFXN1-210ENST00000513725 PHLDB1Q86UU1 1377 aa21.48■■□□□ 1.03
SFXN1-210ENST00000513725 DMRT2Q9Y5R5 561 aa21.48■■□□□ 1.03
SFXN1-210ENST00000513725 KIF27Q86VH2 1401 aa21.46■■□□□ 1.03
SFXN1-210ENST00000513725 RAPGEF3O95398 923 aa21.44■■□□□ 1.02
SFXN1-210ENST00000513725 CARMIL1Q5VZK9 1371 aa21.43■■□□□ 1.02
SFXN1-210ENST00000513725 YEATS2Q9ULM3 1422 aa21.39■■□□□ 1.02
SFXN1-210ENST00000513725 UGGT2Q9NYU1 1516 aa21.37■■□□□ 1.01
SFXN1-210ENST00000513725 KIAA0556O60303 1618 aa21.37■■□□□ 1.01
SFXN1-210ENST00000513725 POGZQ7Z3K3 1410 aa21.36■■□□□ 1.01
SFXN1-210ENST00000513725 IQSEC2Q5JU85 1478 aa21.31■■□□□ 1
SFXN1-210ENST00000513725 NEO1Q92859 1461 aa21.31■■□□□ 1
SFXN1-210ENST00000513725 ARHGEF40Q8TER5 1519 aa21.29■■□□□ 1
SFXN1-210ENST00000513725 FRMPD1Q5SYB0 1578 aa21.29■■□□□ 1
SFXN1-210ENST00000513725 STRCQ7RTU9 1775 aa21.28■■□□□ 1
SFXN1-210ENST00000513725 FANCAO15360 1455 aa21.28■■□□□ 1
SFXN1-210ENST00000513725 PREX1Q8TCU6 1659 aa21.28■■□□□ 1
SFXN1-210ENST00000513725 ABCA8O94911 1581 aa21.25■□□□□ 0.99
SFXN1-210ENST00000513725 ABCA9Q8IUA7 1624 aa21.24■□□□□ 0.99
SFXN1-210ENST00000513725 TTC37Q6PGP7 1564 aa21.23■□□□□ 0.99
SFXN1-210ENST00000513725 PTPRTO14522 1441 aa21.23■□□□□ 0.99
SFXN1-210ENST00000513725 AKNAQ7Z591 1439 aa21.21■□□□□ 0.99
SFXN1-210ENST00000513725 FER1L4A9Z1Z3 1794 aa21.21■□□□□ 0.99
SFXN1-210ENST00000513725 LTBP4Q8N2S1 1624 aa21.21■□□□□ 0.99
SFXN1-210ENST00000513725 MLECQ14165 292 aa21.2■□□□□ 0.98
SFXN1-210ENST00000513725 DENND4BO75064 1496 aaPredicted RBP21.15■□□□□ 0.98
SFXN1-210ENST00000513725 UHRF1BP1Q6BDS2 1440 aa21.15■□□□□ 0.98
SFXN1-210ENST00000513725 UBAP1LF5GYI3 381 aa21.14■□□□□ 0.97
SFXN1-210ENST00000513725 GOLGA3Q08378 1498 aa21.13■□□□□ 0.97
SFXN1-210ENST00000513725 MED1Q15648 1581 aaPredicted RBP21.12■□□□□ 0.97
SFXN1-210ENST00000513725 RICTORQ6R327 1708 aa21.12■□□□□ 0.97
SFXN1-210ENST00000513725 ARID3CA6NKF2 412 aa21.11■□□□□ 0.97
SFXN1-210ENST00000513725 FHOD3Q2V2M9 1422 aa21.11■□□□□ 0.97
SFXN1-210ENST00000513725 CEBPAP49715 358 aaPredicted RBP21.1■□□□□ 0.97
SFXN1-210ENST00000513725 SIGLEC1Q9BZZ2 1709 aa21.09■□□□□ 0.97
SFXN1-210ENST00000513725 EFCAB5A4FU69 1503 aa21.09■□□□□ 0.97
SFXN1-210ENST00000513725 FAM9AQ8IZU1 332 aaPredicted RBP21.09■□□□□ 0.97
SFXN1-210ENST00000513725 ZFYVE16Q7Z3T8 1539 aa21.09■□□□□ 0.97
SFXN1-210ENST00000513725 ATP10BO94823 1461 aa21.08■□□□□ 0.97
SFXN1-210ENST00000513725 RAPGEF2Q9Y4G8 1499 aa21.08■□□□□ 0.97
SFXN1-210ENST00000513725 SUPT5HO00267 1087 aaKnown RBP21.06■□□□□ 0.96
SFXN1-210ENST00000513725 PHF23Q9BUL5 403 aaPredicted RBP21.06■□□□□ 0.96
SFXN1-210ENST00000513725 ZMYM4Q5VZL5 1548 aa21.05■□□□□ 0.96
SFXN1-210ENST00000513725 ARHGEF12Q9NZN5 1544 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms