RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 ADAMTS12P58397 1594 aa16.56■□□□□ 0.24
CAST-239ENST00000513666 KIF13AQ9H1H9 1805 aa16.56■□□□□ 0.24
CAST-239ENST00000513666 FHAD1B1AJZ9 1412 aa16.49■□□□□ 0.23
CAST-239ENST00000513666 WRNQ14191 1432 aaPredicted RBP eCLIP16.49■□□□□ 0.23
CAST-239ENST00000513666 PRG4Q92954 1404 aaPredicted RBP16.43■□□□□ 0.22
CAST-239ENST00000513666 ERICH3Q5RHP9 1530 aa16.43■□□□□ 0.22
CAST-239ENST00000513666 ABCC10Q5T3U5 1492 aa16.42■□□□□ 0.22
CAST-239ENST00000513666 BIVM-ERCC5R4GMW8 1640 aa16.41■□□□□ 0.22
CAST-239ENST00000513666 TOP2BQ02880 1626 aa16.4■□□□□ 0.22
CAST-239ENST00000513666 FAM69CQ0P6D2 419 aa16.4■□□□□ 0.22
CAST-239ENST00000513666 MAPKBP1O60336 1514 aa16.38■□□□□ 0.21
CAST-239ENST00000513666 JPH4Q96JJ6 628 aa16.38■□□□□ 0.21
CAST-239ENST00000513666 DIP2BQ9P265 1576 aa16.37■□□□□ 0.21
CAST-239ENST00000513666 NPM1P06748 294 aaKnown RBP eCLIP16.35■□□□□ 0.21
CAST-239ENST00000513666 KDM4FA0A1W2PPD8 638 aa16.34■□□□□ 0.21
CAST-239ENST00000513666 RUSC2Q8N2Y8 1516 aa16.34■□□□□ 0.21
CAST-239ENST00000513666 KDM6BO15054 1643 aa16.33■□□□□ 0.2
CAST-239ENST00000513666 ADCY10Q96PN6 1610 aa16.32■□□□□ 0.2
CAST-239ENST00000513666 SCAF1Q9H7N4 1312 aaKnown RBP16.27■□□□□ 0.19
CAST-239ENST00000513666 TSPOAP1O95153 1857 aa16.25■□□□□ 0.19
CAST-239ENST00000513666 ILDR1Q86SU0 546 aaPredicted RBP16.25■□□□□ 0.19
CAST-239ENST00000513666 MAPK8IP2Q13387 824 aaPredicted RBP16.24■□□□□ 0.19
CAST-239ENST00000513666 KIAA0586Q9BVV6 1533 aa16.2■□□□□ 0.18
CAST-239ENST00000513666 SUPT5HO00267 1087 aaKnown RBP16.19■□□□□ 0.18
CAST-239ENST00000513666 DMRT2Q9Y5R5 561 aa16.19■□□□□ 0.18
CAST-239ENST00000513666 PPRC1Q5VV67 1664 aaKnown RBP16.13■□□□□ 0.17
CAST-239ENST00000513666 PTPRGP23470 1445 aa16.12■□□□□ 0.17
CAST-239ENST00000513666 ADGRL1O94910 1474 aa16.12■□□□□ 0.17
CAST-239ENST00000513666 CUL7Q14999 1698 aa16.11■□□□□ 0.17
CAST-239ENST00000513666 ABCC2Q92887 1545 aa16.11■□□□□ 0.17
CAST-239ENST00000513666 GLI2P10070 1586 aa16.11■□□□□ 0.17
CAST-239ENST00000513666 IGF1RP08069 1367 aa16.1■□□□□ 0.17
CAST-239ENST00000513666 ASXL2Q76L83 1435 aa16.09■□□□□ 0.17
CAST-239ENST00000513666 PLB1Q6P1J6 1458 aa16.09■□□□□ 0.17
CAST-239ENST00000513666 TNIKQ9UKE5 1360 aa16.06■□□□□ 0.16
CAST-239ENST00000513666 PPP4R3CPQ6ZMV5 832 aa16.06■□□□□ 0.16
CAST-239ENST00000513666 KIF27Q86VH2 1401 aa16.05■□□□□ 0.16
CAST-239ENST00000513666 CARMIL2Q6F5E8 1435 aa16.05■□□□□ 0.16
CAST-239ENST00000513666 UHRF1BP1LA0JNW5 1464 aa16.04■□□□□ 0.16
CAST-239ENST00000513666 TTBK1Q5TCY1 1321 aaPredicted RBP16.03■□□□□ 0.16
CAST-239ENST00000513666 HECW2Q9P2P5 1572 aa16.03■□□□□ 0.16
CAST-239ENST00000513666 COL17A1Q9UMD9 1497 aaPredicted RBP16.03■□□□□ 0.16
CAST-239ENST00000513666 MAP3K4Q9Y6R4 1608 aa16.01■□□□□ 0.15
CAST-239ENST00000513666 UACAQ9BZF9 1416 aa15.99■□□□□ 0.15
CAST-239ENST00000513666 EPRSP07814 1512 aaKnown RBP15.99■□□□□ 0.15
CAST-239ENST00000513666 IQGAP2Q13576 1575 aa15.99■□□□□ 0.15
CAST-239ENST00000513666 CARMIL1Q5VZK9 1371 aa15.99■□□□□ 0.15
CAST-239ENST00000513666 TEX14Q8IWB6 1497 aa15.98■□□□□ 0.15
CAST-239ENST00000513666 KDM5BQ9UGL1 1544 aa15.97■□□□□ 0.15
CAST-239ENST00000513666 DISP1Q96F81 1524 aa15.94■□□□□ 0.14
CAST-239ENST00000513666 ZCCHC11Q5TAX3 1644 aaKnown RBP15.93■□□□□ 0.14
CAST-239ENST00000513666 UGGT2Q9NYU1 1516 aa15.87■□□□□ 0.13
CAST-239ENST00000513666 WDR7Q9Y4E6 1490 aa15.86■□□□□ 0.13
CAST-239ENST00000513666 KIAA0556O60303 1618 aa15.86■□□□□ 0.13
CAST-239ENST00000513666 MAGI3Q5TCQ9 1506 aa15.83■□□□□ 0.13
CAST-239ENST00000513666 CFAP43Q8NDM7 1665 aa15.82■□□□□ 0.12
CAST-239ENST00000513666 FBXO41Q8TF61 875 aa15.81■□□□□ 0.12
CAST-239ENST00000513666 CD109Q6YHK3 1445 aa15.81■□□□□ 0.12
CAST-239ENST00000513666 RAPGEF2Q9Y4G8 1499 aa15.8■□□□□ 0.12
CAST-239ENST00000513666 KIF21BO75037 1637 aa15.78■□□□□ 0.12
CAST-239ENST00000513666 CNKSR2Q8WXI2 1034 aa15.75■□□□□ 0.11
CAST-239ENST00000513666 ABCA8O94911 1581 aa15.74■□□□□ 0.11
CAST-239ENST00000513666 KCNH8Q96L42 1107 aa15.73■□□□□ 0.11
CAST-239ENST00000513666 ARAP3Q8WWN8 1544 aa15.72■□□□□ 0.11
CAST-239ENST00000513666 CTTNBP2Q8WZ74 1663 aa15.71■□□□□ 0.1
CAST-239ENST00000513666 GOLGA3Q08378 1498 aa15.7■□□□□ 0.1
CAST-239ENST00000513666 ADAMTSL3P82987 1691 aa15.69■□□□□ 0.1
CAST-239ENST00000513666 PTPRMP28827 1452 aa15.69■□□□□ 0.1
CAST-239ENST00000513666 HOXD11P31277 338 aaPredicted RBP15.68■□□□□ 0.1
CAST-239ENST00000513666 PHLDB1Q86UU1 1377 aa15.64■□□□□ 0.09
CAST-239ENST00000513666 PCF11O94913 1555 aaKnown RBP15.62■□□□□ 0.09
CAST-239ENST00000513666 ABCA9Q8IUA7 1624 aa15.62■□□□□ 0.09
CAST-239ENST00000513666 BCORL1Q5H9F3 1711 aa15.62■□□□□ 0.09
CAST-239ENST00000513666 ATP10BO94823 1461 aa15.6■□□□□ 0.09
CAST-239ENST00000513666 LMTK3Q96Q04 1460 aa15.6■□□□□ 0.09
CAST-239ENST00000513666 MADDQ8WXG6 1647 aa15.59■□□□□ 0.09
CAST-239ENST00000513666 RNF216Q9NWF9 866 aaPredicted RBP15.58■□□□□ 0.09
CAST-239ENST00000513666 NEO1Q92859 1461 aa15.58■□□□□ 0.08
CAST-239ENST00000513666 RAPGEF3O95398 923 aa15.58■□□□□ 0.08
CAST-239ENST00000513666 FRMPD1Q5SYB0 1578 aa15.57■□□□□ 0.08
CAST-239ENST00000513666 ARID3CA6NKF2 412 aa15.56■□□□□ 0.08
CAST-239ENST00000513666 FAM9AQ8IZU1 332 aaPredicted RBP15.54■□□□□ 0.08
CAST-239ENST00000513666 PRXQ9BXM0 1461 aa15.54■□□□□ 0.08
CAST-239ENST00000513666 ARID4BQ4LE39 1312 aaPredicted RBP15.54■□□□□ 0.08
CAST-239ENST00000513666 RIMS1Q86UR5 1692 aaKnown RBP15.52■□□□□ 0.08
CAST-239ENST00000513666 ARHGEF40Q8TER5 1519 aa15.51■□□□□ 0.07
CAST-239ENST00000513666 P3H3Q8IVL6 736 aa15.49■□□□□ 0.07
CAST-239ENST00000513666 NCBP3Q53F19 620 aaKnown RBP15.48■□□□□ 0.07
CAST-239ENST00000513666 RAPGEF6Q8TEU7 1601 aa15.48■□□□□ 0.07
CAST-239ENST00000513666 RICTORQ6R327 1708 aa15.47■□□□□ 0.07
CAST-239ENST00000513666 HSPA2P54652 639 aa15.47■□□□□ 0.07
CAST-239ENST00000513666 DENND4BO75064 1496 aaPredicted RBP15.46■□□□□ 0.07
CAST-239ENST00000513666 SAMD9Q5K651 1589 aa15.46■□□□□ 0.07
CAST-239ENST00000513666 CERKQ8TCT0 537 aa15.45■□□□□ 0.06
CAST-239ENST00000513666 FHOD3Q2V2M9 1422 aa15.44■□□□□ 0.06
CAST-239ENST00000513666 POGZQ7Z3K3 1410 aa15.43■□□□□ 0.06
CAST-239ENST00000513666 FANCAO15360 1455 aa15.43■□□□□ 0.06
CAST-239ENST00000513666 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.43■□□□□ 0.06
CAST-239ENST00000513666 HNRNPUL2Q1KMD3 747 aaKnown RBP15.43■□□□□ 0.06
CAST-239ENST00000513666 NUP153P49790 1475 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms