RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 ADAMTS12P58397 1594 aa12.52□□□□□ -0.4
HTT-212ENST00000513639 CEP170Q5SW79 1584 aa12.48□□□□□ -0.41
HTT-212ENST00000513639 PRG4Q92954 1404 aaPredicted RBP12.48□□□□□ -0.41
HTT-212ENST00000513639 NPM1P06748 294 aaKnown RBP eCLIP12.48□□□□□ -0.41
HTT-212ENST00000513639 CARMIL1Q5VZK9 1371 aa12.47□□□□□ -0.41
HTT-212ENST00000513639 KIAA0586Q9BVV6 1533 aa12.43□□□□□ -0.42
HTT-212ENST00000513639 SHROOM2Q13796 1616 aa12.41□□□□□ -0.42
HTT-212ENST00000513639 ERCC6L2Q5T890 1561 aa12.41□□□□□ -0.42
HTT-212ENST00000513639 CUL7Q14999 1698 aa12.38□□□□□ -0.43
HTT-212ENST00000513639 CARMIL2Q6F5E8 1435 aa12.37□□□□□ -0.43
HTT-212ENST00000513639 PTPRGP23470 1445 aa12.36□□□□□ -0.43
HTT-212ENST00000513639 RUSC2Q8N2Y8 1516 aa12.33□□□□□ -0.44
HTT-212ENST00000513639 FAM69CQ0P6D2 419 aa12.33□□□□□ -0.44
HTT-212ENST00000513639 RAPGEF2Q9Y4G8 1499 aa12.33□□□□□ -0.44
HTT-212ENST00000513639 TNIKQ9UKE5 1360 aa12.32□□□□□ -0.44
HTT-212ENST00000513639 TTBK1Q5TCY1 1321 aaPredicted RBP12.32□□□□□ -0.44
HTT-212ENST00000513639 FAM9AQ8IZU1 332 aaPredicted RBP12.31□□□□□ -0.44
HTT-212ENST00000513639 CSRNP3Q8WYN3 585 aa12.26□□□□□ -0.45
HTT-212ENST00000513639 ABCC10Q5T3U5 1492 aa12.25□□□□□ -0.45
HTT-212ENST00000513639 IQGAP2Q13576 1575 aa12.25□□□□□ -0.45
HTT-212ENST00000513639 MAPKBP1O60336 1514 aa12.22□□□□□ -0.45
HTT-212ENST00000513639 UACAQ9BZF9 1416 aa12.22□□□□□ -0.45
HTT-212ENST00000513639 ADCY10Q96PN6 1610 aa12.2□□□□□ -0.46
HTT-212ENST00000513639 ABCC2Q92887 1545 aa12.2□□□□□ -0.46
HTT-212ENST00000513639 DISP1Q96F81 1524 aa12.2□□□□□ -0.46
HTT-212ENST00000513639 UGGT2Q9NYU1 1516 aa12.2□□□□□ -0.46
HTT-212ENST00000513639 UHRF1BP1LA0JNW5 1464 aa12.2□□□□□ -0.46
HTT-212ENST00000513639 PRXQ9BXM0 1461 aa12.2□□□□□ -0.46
HTT-212ENST00000513639 GOLGA3Q08378 1498 aa12.19□□□□□ -0.46
HTT-212ENST00000513639 PLB1Q6P1J6 1458 aa12.19□□□□□ -0.46
HTT-212ENST00000513639 EEA1Q15075 1411 aa12.16□□□□□ -0.46
HTT-212ENST00000513639 ASXL2Q76L83 1435 aa12.16□□□□□ -0.46
HTT-212ENST00000513639 KIF13AQ9H1H9 1805 aa12.13□□□□□ -0.47
HTT-212ENST00000513639 KDM5BQ9UGL1 1544 aa12.12□□□□□ -0.47
HTT-212ENST00000513639 P3H3Q8IVL6 736 aa12.12□□□□□ -0.47
HTT-212ENST00000513639 DIP2BQ9P265 1576 aa12.12□□□□□ -0.47
HTT-212ENST00000513639 KCNH8Q96L42 1107 aa12.11□□□□□ -0.47
HTT-212ENST00000513639 KIAA0556O60303 1618 aa12.1□□□□□ -0.47
HTT-212ENST00000513639 GLI2P10070 1586 aa12.07□□□□□ -0.48
HTT-212ENST00000513639 EPRSP07814 1512 aaKnown RBP12.06□□□□□ -0.48
HTT-212ENST00000513639 RANGAP1P46060 587 aaPredicted RBP12.06□□□□□ -0.48
HTT-212ENST00000513639 CTTNBP2Q8WZ74 1663 aa12.04□□□□□ -0.48
HTT-212ENST00000513639 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.04□□□□□ -0.48
HTT-212ENST00000513639 UBTFP17480 764 aaKnown RBP12.04□□□□□ -0.48
HTT-212ENST00000513639 HNRNPUL2Q1KMD3 747 aaKnown RBP12.04□□□□□ -0.48
HTT-212ENST00000513639 TEX14Q8IWB6 1497 aa12.03□□□□□ -0.48
HTT-212ENST00000513639 WDR7Q9Y4E6 1490 aa12.03□□□□□ -0.48
HTT-212ENST00000513639 CD109Q6YHK3 1445 aa12.02□□□□□ -0.49
HTT-212ENST00000513639 TSPOAP1O95153 1857 aa12.02□□□□□ -0.49
HTT-212ENST00000513639 KDM6BO15054 1643 aa12.01□□□□□ -0.49
HTT-212ENST00000513639 ARID3CA6NKF2 412 aa12.01□□□□□ -0.49
HTT-212ENST00000513639 ABCA8O94911 1581 aa12.01□□□□□ -0.49
HTT-212ENST00000513639 ZCCHC11Q5TAX3 1644 aaKnown RBP12□□□□□ -0.49
HTT-212ENST00000513639 PLEKHD1A6NEE1 506 aa12□□□□□ -0.49
HTT-212ENST00000513639 ATP10BO94823 1461 aa11.99□□□□□ -0.49
HTT-212ENST00000513639 PHLDB1Q86UU1 1377 aa11.97□□□□□ -0.49
HTT-212ENST00000513639 KDM4FA0A1W2PPD8 638 aa11.97□□□□□ -0.49
HTT-212ENST00000513639 EHMT2Q96KQ7 1210 aa11.96□□□□□ -0.49
HTT-212ENST00000513639 MAGI3Q5TCQ9 1506 aa11.96□□□□□ -0.5
HTT-212ENST00000513639 COL17A1Q9UMD9 1497 aaPredicted RBP11.95□□□□□ -0.5
HTT-212ENST00000513639 MAP3K4Q9Y6R4 1608 aa11.94□□□□□ -0.5
HTT-212ENST00000513639 FOXD1Q16676 465 aa11.94□□□□□ -0.5
HTT-212ENST00000513639 SAMD9Q5K651 1589 aa11.93□□□□□ -0.5
HTT-212ENST00000513639 CDK11AQ9UQ88 783 aaPredicted RBP11.93□□□□□ -0.5
HTT-212ENST00000513639 FHOD3Q2V2M9 1422 aa11.93□□□□□ -0.5
HTT-212ENST00000513639 ATP1B4Q9UN42 357 aaPredicted RBP11.92□□□□□ -0.5
HTT-212ENST00000513639 KIF21BO75037 1637 aa11.92□□□□□ -0.5
HTT-212ENST00000513639 PPRC1Q5VV67 1664 aaKnown RBP11.91□□□□□ -0.5
HTT-212ENST00000513639 EFCAB5A4FU69 1503 aa11.9□□□□□ -0.5
HTT-212ENST00000513639 CFAP43Q8NDM7 1665 aa11.89□□□□□ -0.51
HTT-212ENST00000513639 RAPGEF6Q8TEU7 1601 aa11.89□□□□□ -0.51
HTT-212ENST00000513639 NUP153P49790 1475 aaKnown RBP11.89□□□□□ -0.51
HTT-212ENST00000513639 FMN1Q68DA7 1419 aa11.88□□□□□ -0.51
HTT-212ENST00000513639 ARAP3Q8WWN8 1544 aa11.87□□□□□ -0.51
HTT-212ENST00000513639 RAPGEF3O95398 923 aa11.86□□□□□ -0.51
HTT-212ENST00000513639 NEO1Q92859 1461 aa11.84□□□□□ -0.51
HTT-212ENST00000513639 ABCA9Q8IUA7 1624 aa11.82□□□□□ -0.52
HTT-212ENST00000513639 EFCAB2Q5VUJ9 269 aa11.82□□□□□ -0.52
HTT-212ENST00000513639 ADGRL1O94910 1474 aa11.81□□□□□ -0.52
HTT-212ENST00000513639 ARHGAP35Q9NRY4 1499 aa11.81□□□□□ -0.52
HTT-212ENST00000513639 AKNAQ7Z591 1439 aa11.79□□□□□ -0.52
HTT-212ENST00000513639 ARID4BQ4LE39 1312 aaPredicted RBP11.79□□□□□ -0.52
HTT-212ENST00000513639 DENND4BO75064 1496 aaPredicted RBP11.77□□□□□ -0.52
HTT-212ENST00000513639 PLCH2O75038 1416 aa11.77□□□□□ -0.53
HTT-212ENST00000513639 FANCAO15360 1455 aa11.76□□□□□ -0.53
HTT-212ENST00000513639 ADRA2BP18089 450 aa11.75□□□□□ -0.53
HTT-212ENST00000513639 CLIP1P30622 1438 aa11.75□□□□□ -0.53
HTT-212ENST00000513639 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.75□□□□□ -0.53
HTT-212ENST00000513639 CDK13Q14004 1512 aaKnown RBP11.74□□□□□ -0.53
HTT-212ENST00000513639 TROQ12816 1431 aaPredicted RBP11.73□□□□□ -0.53
HTT-212ENST00000513639 CASKIN1Q8WXD9 1431 aa11.73□□□□□ -0.53
HTT-212ENST00000513639 HECW1Q76N89 1606 aa11.72□□□□□ -0.53
HTT-212ENST00000513639 SCAPERQ9BY12 1400 aa11.72□□□□□ -0.53
HTT-212ENST00000513639 MAGI2Q86UL8 1455 aa11.7□□□□□ -0.54
HTT-212ENST00000513639 POGZQ7Z3K3 1410 aa11.7□□□□□ -0.54
HTT-212ENST00000513639 MYT1LQ9UL68 1186 aa11.7□□□□□ -0.54
HTT-212ENST00000513639 AFAP1Q8N556 730 aa11.69□□□□□ -0.54
HTT-212ENST00000513639 PPP6R1Q9UPN7 881 aa11.69□□□□□ -0.54
HTT-212ENST00000513639 CFAP74Q9C0B2 1584 aa11.69□□□□□ -0.54
HTT-212ENST00000513639 CCDC18Q5T9S5 1454 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms