RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 KIF27Q86VH2 1401 aa23.38■■□□□ 1.33
POLR2J3-217ENST00000513438 RUSC2Q8N2Y8 1516 aa23.34■■□□□ 1.33
POLR2J3-217ENST00000513438 KIAA0586Q9BVV6 1533 aa23.3■■□□□ 1.32
POLR2J3-217ENST00000513438 NPM1P06748 294 aaKnown RBP eCLIP23.28■■□□□ 1.32
POLR2J3-217ENST00000513438 CUL7Q14999 1698 aa23.27■■□□□ 1.32
POLR2J3-217ENST00000513438 KIF13AQ9H1H9 1805 aa23.26■■□□□ 1.31
POLR2J3-217ENST00000513438 CARMIL1Q5VZK9 1371 aa23.26■■□□□ 1.31
POLR2J3-217ENST00000513438 FAM69CQ0P6D2 419 aa23.2■■□□□ 1.3
POLR2J3-217ENST00000513438 ADCY10Q96PN6 1610 aa23.15■■□□□ 1.3
POLR2J3-217ENST00000513438 TTBK1Q5TCY1 1321 aaPredicted RBP23.14■■□□□ 1.3
POLR2J3-217ENST00000513438 ABCC10Q5T3U5 1492 aa23.14■■□□□ 1.29
POLR2J3-217ENST00000513438 PTPRGP23470 1445 aa23.12■■□□□ 1.29
POLR2J3-217ENST00000513438 MAPKBP1O60336 1514 aa23.11■■□□□ 1.29
POLR2J3-217ENST00000513438 CARMIL2Q6F5E8 1435 aa23.08■■□□□ 1.28
POLR2J3-217ENST00000513438 TNIKQ9UKE5 1360 aa23.06■■□□□ 1.28
POLR2J3-217ENST00000513438 DIP2BQ9P265 1576 aa23.04■■□□□ 1.28
POLR2J3-217ENST00000513438 IQGAP2Q13576 1575 aa23.03■■□□□ 1.28
POLR2J3-217ENST00000513438 RAPGEF2Q9Y4G8 1499 aa23■■□□□ 1.27
POLR2J3-217ENST00000513438 TSPOAP1O95153 1857 aa22.98■■□□□ 1.27
POLR2J3-217ENST00000513438 KDM6BO15054 1643 aa22.96■■□□□ 1.27
POLR2J3-217ENST00000513438 ABCC2Q92887 1545 aa22.95■■□□□ 1.26
POLR2J3-217ENST00000513438 DISP1Q96F81 1524 aa22.95■■□□□ 1.26
POLR2J3-217ENST00000513438 UACAQ9BZF9 1416 aa22.91■■□□□ 1.26
POLR2J3-217ENST00000513438 UHRF1BP1LA0JNW5 1464 aa22.91■■□□□ 1.26
POLR2J3-217ENST00000513438 UGGT2Q9NYU1 1516 aa22.9■■□□□ 1.26
POLR2J3-217ENST00000513438 ASXL2Q76L83 1435 aa22.9■■□□□ 1.26
POLR2J3-217ENST00000513438 PLB1Q6P1J6 1458 aa22.87■■□□□ 1.25
POLR2J3-217ENST00000513438 KDM4FA0A1W2PPD8 638 aa22.84■■□□□ 1.25
POLR2J3-217ENST00000513438 KIAA0556O60303 1618 aa22.82■■□□□ 1.24
POLR2J3-217ENST00000513438 KDM5BQ9UGL1 1544 aa22.81■■□□□ 1.24
POLR2J3-217ENST00000513438 GLI2P10070 1586 aa22.8■■□□□ 1.24
POLR2J3-217ENST00000513438 CTTNBP2Q8WZ74 1663 aa22.75■■□□□ 1.23
POLR2J3-217ENST00000513438 PRXQ9BXM0 1461 aa22.75■■□□□ 1.23
POLR2J3-217ENST00000513438 EPRSP07814 1512 aaKnown RBP22.74■■□□□ 1.23
POLR2J3-217ENST00000513438 ZCCHC11Q5TAX3 1644 aaKnown RBP22.74■■□□□ 1.23
POLR2J3-217ENST00000513438 PPRC1Q5VV67 1664 aaKnown RBP22.73■■□□□ 1.23
POLR2J3-217ENST00000513438 GOLGA3Q08378 1498 aa22.73■■□□□ 1.23
POLR2J3-217ENST00000513438 MAP3K4Q9Y6R4 1608 aa22.66■■□□□ 1.22
POLR2J3-217ENST00000513438 CSRNP3Q8WYN3 585 aa22.65■■□□□ 1.22
POLR2J3-217ENST00000513438 COL17A1Q9UMD9 1497 aaPredicted RBP22.65■■□□□ 1.22
POLR2J3-217ENST00000513438 P3H3Q8IVL6 736 aa22.64■■□□□ 1.21
POLR2J3-217ENST00000513438 KCNH8Q96L42 1107 aa22.64■■□□□ 1.21
POLR2J3-217ENST00000513438 WDR7Q9Y4E6 1490 aa22.64■■□□□ 1.21
POLR2J3-217ENST00000513438 ABCA8O94911 1581 aa22.63■■□□□ 1.21
POLR2J3-217ENST00000513438 TEX14Q8IWB6 1497 aa22.61■■□□□ 1.21
POLR2J3-217ENST00000513438 FAM9AQ8IZU1 332 aaPredicted RBP22.61■■□□□ 1.21
POLR2J3-217ENST00000513438 ADGRL1O94910 1474 aa22.59■■□□□ 1.21
POLR2J3-217ENST00000513438 CD109Q6YHK3 1445 aa22.56■■□□□ 1.2
POLR2J3-217ENST00000513438 ARID3CA6NKF2 412 aa22.55■■□□□ 1.2
POLR2J3-217ENST00000513438 MAGI3Q5TCQ9 1506 aa22.5■■□□□ 1.19
POLR2J3-217ENST00000513438 ATP10BO94823 1461 aa22.49■■□□□ 1.19
POLR2J3-217ENST00000513438 CFAP43Q8NDM7 1665 aa22.49■■□□□ 1.19
POLR2J3-217ENST00000513438 RANGAP1P46060 587 aaPredicted RBP22.48■■□□□ 1.19
POLR2J3-217ENST00000513438 ILDR1Q86SU0 546 aaPredicted RBP22.46■■□□□ 1.19
POLR2J3-217ENST00000513438 EEA1Q15075 1411 aa22.46■■□□□ 1.19
POLR2J3-217ENST00000513438 SAMD9Q5K651 1589 aa22.44■■□□□ 1.18
POLR2J3-217ENST00000513438 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.42■■□□□ 1.18
POLR2J3-217ENST00000513438 HNRNPUL2Q1KMD3 747 aaKnown RBP22.42■■□□□ 1.18
POLR2J3-217ENST00000513438 RAPGEF6Q8TEU7 1601 aa22.38■■□□□ 1.17
POLR2J3-217ENST00000513438 HECW2Q9P2P5 1572 aa22.36■■□□□ 1.17
POLR2J3-217ENST00000513438 FHOD3Q2V2M9 1422 aa22.34■■□□□ 1.17
POLR2J3-217ENST00000513438 ARAP3Q8WWN8 1544 aa22.33■■□□□ 1.17
POLR2J3-217ENST00000513438 ABCA9Q8IUA7 1624 aa22.31■■□□□ 1.16
POLR2J3-217ENST00000513438 NUP153P49790 1475 aaKnown RBP22.31■■□□□ 1.16
POLR2J3-217ENST00000513438 PHLDB1Q86UU1 1377 aa22.3■■□□□ 1.16
POLR2J3-217ENST00000513438 PLEKHD1A6NEE1 506 aa22.28■■□□□ 1.16
POLR2J3-217ENST00000513438 RAPGEF3O95398 923 aa22.27■■□□□ 1.16
POLR2J3-217ENST00000513438 EHMT2Q96KQ7 1210 aa22.27■■□□□ 1.16
POLR2J3-217ENST00000513438 KIF21BO75037 1637 aa22.26■■□□□ 1.15
POLR2J3-217ENST00000513438 UBTFP17480 764 aaKnown RBP22.23■■□□□ 1.15
POLR2J3-217ENST00000513438 CHIC1Q5VXU3 224 aa22.23■■□□□ 1.15
POLR2J3-217ENST00000513438 NEO1Q92859 1461 aa22.22■■□□□ 1.15
POLR2J3-217ENST00000513438 EFCAB5A4FU69 1503 aa22.21■■□□□ 1.15
POLR2J3-217ENST00000513438 ATP1B4Q9UN42 357 aaPredicted RBP22.14■■□□□ 1.13
POLR2J3-217ENST00000513438 AKNAQ7Z591 1439 aa22.12■■□□□ 1.13
POLR2J3-217ENST00000513438 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.11■■□□□ 1.13
POLR2J3-217ENST00000513438 ARID4BQ4LE39 1312 aaPredicted RBP22.11■■□□□ 1.13
POLR2J3-217ENST00000513438 FRMPD1Q5SYB0 1578 aa22.1■■□□□ 1.13
POLR2J3-217ENST00000513438 CDK13Q14004 1512 aaKnown RBP22.1■■□□□ 1.13
POLR2J3-217ENST00000513438 DENND4BO75064 1496 aaPredicted RBP22.09■■□□□ 1.13
POLR2J3-217ENST00000513438 FANCAO15360 1455 aa22.09■■□□□ 1.13
POLR2J3-217ENST00000513438 PTPRMP28827 1452 aa22.06■■□□□ 1.12
POLR2J3-217ENST00000513438 ARHGAP35Q9NRY4 1499 aa22.06■■□□□ 1.12
POLR2J3-217ENST00000513438 ADAMTSL3P82987 1691 aa22.06■■□□□ 1.12
POLR2J3-217ENST00000513438 FMN1Q68DA7 1419 aa22.06■■□□□ 1.12
POLR2J3-217ENST00000513438 TTC37Q6PGP7 1564 aa22.05■■□□□ 1.12
POLR2J3-217ENST00000513438 CDK11AQ9UQ88 783 aaPredicted RBP22.02■■□□□ 1.12
POLR2J3-217ENST00000513438 CFAP74Q9C0B2 1584 aa22.02■■□□□ 1.12
POLR2J3-217ENST00000513438 RICTORQ6R327 1708 aa22.02■■□□□ 1.12
POLR2J3-217ENST00000513438 PLCH2O75038 1416 aa22.01■■□□□ 1.11
POLR2J3-217ENST00000513438 BCORL1Q5H9F3 1711 aa22■■□□□ 1.11
POLR2J3-217ENST00000513438 HECW1Q76N89 1606 aa21.98■■□□□ 1.11
POLR2J3-217ENST00000513438 SCAPERQ9BY12 1400 aa21.97■■□□□ 1.11
POLR2J3-217ENST00000513438 EFCAB2Q5VUJ9 269 aa21.97■■□□□ 1.11
POLR2J3-217ENST00000513438 FBXO41Q8TF61 875 aa21.97■■□□□ 1.11
POLR2J3-217ENST00000513438 MADDQ8WXG6 1647 aa21.97■■□□□ 1.11
POLR2J3-217ENST00000513438 ARHGEF40Q8TER5 1519 aa21.96■■□□□ 1.11
POLR2J3-217ENST00000513438 PLPPR3Q6T4P5 718 aa21.95■■□□□ 1.1
POLR2J3-217ENST00000513438 YEATS2Q9ULM3 1422 aa21.95■■□□□ 1.1
POLR2J3-217ENST00000513438 ZMYM4Q5VZL5 1548 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms