RNA–Protein interactions for RNA: ENST00000512690.5

RPS3A-210, Transcript of ribosomal protein S3A, humanhuman

TSL 3 BASIC

Gene RPS3A, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-210ENST00000512690 SMARCA4P51532 1647 aa10.52□□□□□ -0.73
RPS3A-210ENST00000512690 FARP1Q9Y4F1 1045 aaPredicted RBP10.52□□□□□ -0.73
RPS3A-210ENST00000512690 HMGXB3Q12766 1538 aa10.51□□□□□ -0.73
RPS3A-210ENST00000512690 PEG3Q9GZU2 1588 aa10.51□□□□□ -0.73
RPS3A-210ENST00000512690 GABBR2O75899 941 aa10.43□□□□□ -0.74
RPS3A-210ENST00000512690 MROH2BQ7Z745 1585 aa10.43□□□□□ -0.74
RPS3A-210ENST00000512690 BAZ1BQ9UIG0 1483 aaKnown RBP10.42□□□□□ -0.74
RPS3A-210ENST00000512690 CD44P16070 742 aaKnown RBP10.41□□□□□ -0.74
RPS3A-210ENST00000512690 MIER1Q8N108 512 aa10.37□□□□□ -0.75
RPS3A-210ENST00000512690 MNX1P50219 401 aaPredicted RBP10.36□□□□□ -0.75
RPS3A-210ENST00000512690 CUX2O14529 1486 aa10.33□□□□□ -0.76
RPS3A-210ENST00000512690 ZRANB1Q9UGI0 708 aa10.32□□□□□ -0.76
RPS3A-210ENST00000512690 PLCD3Q8N3E9 789 aa10.31□□□□□ -0.76
RPS3A-210ENST00000512690 RSF1Q96T23 1441 aaPredicted RBP10.31□□□□□ -0.76
RPS3A-210ENST00000512690 ERCC6Q03468 1493 aa10.3□□□□□ -0.76
RPS3A-210ENST00000512690 NPM1P06748 294 aaKnown RBP eCLIP10.3□□□□□ -0.76
RPS3A-210ENST00000512690 LAMC3Q9Y6N6 1575 aa10.3□□□□□ -0.76
RPS3A-210ENST00000512690 NESP48681 1621 aa10.29□□□□□ -0.76
RPS3A-210ENST00000512690 CADPSQ9ULU8 1353 aa10.28□□□□□ -0.76
RPS3A-210ENST00000512690 PDS5BQ9NTI5 1447 aa10.27□□□□□ -0.77
RPS3A-210ENST00000512690 POTEIP0CG38 1075 aa10.26□□□□□ -0.77
RPS3A-210ENST00000512690 WIZO95785 1651 aa10.25□□□□□ -0.77
RPS3A-210ENST00000512690 PLEKHG5O94827 1062 aa10.25□□□□□ -0.77
RPS3A-210ENST00000512690 TSPYL2Q9H2G4 693 aaPredicted RBP10.24□□□□□ -0.77
RPS3A-210ENST00000512690 PHF12Q96QT6 1004 aa10.23□□□□□ -0.77
RPS3A-210ENST00000512690 PAK3O75914 559 aaPredicted RBP10.22□□□□□ -0.77
RPS3A-210ENST00000512690 DNAJC5Q9H3Z4 198 aa10.21□□□□□ -0.77
RPS3A-210ENST00000512690 TOP2AP11388 1531 aaKnown RBP10.2□□□□□ -0.78
RPS3A-210ENST00000512690 FBXO3Q9UK99 471 aa10.2□□□□□ -0.78
RPS3A-210ENST00000512690 CFTRP13569 1480 aa10.19□□□□□ -0.78
RPS3A-210ENST00000512690 ZNF579Q8NAF0 562 aaKnown RBP10.19□□□□□ -0.78
RPS3A-210ENST00000512690 LHX8Q68G74 356 aa10.18□□□□□ -0.78
RPS3A-210ENST00000512690 RASEFQ8IZ41 740 aa10.17□□□□□ -0.78
RPS3A-210ENST00000512690 THOC2Q8NI27 1593 aaKnown RBP10.17□□□□□ -0.78
RPS3A-210ENST00000512690 GALR2O43603 387 aaPredicted RBP10.15□□□□□ -0.78
RPS3A-210ENST00000512690 VASPP50552 380 aaPredicted RBP10.14□□□□□ -0.79
RPS3A-210ENST00000512690 MRC2Q9UBG0 1479 aa10.13□□□□□ -0.79
RPS3A-210ENST00000512690 FANCD2Q9BXW9 1451 aa10.11□□□□□ -0.79
RPS3A-210ENST00000512690 CLCN6P51797 869 aa10.11□□□□□ -0.79
RPS3A-210ENST00000512690 KLHL34Q8N239 644 aa10.11□□□□□ -0.79
RPS3A-210ENST00000512690 WDR62O43379 1518 aa10.11□□□□□ -0.79
RPS3A-210ENST00000512690 CEP164Q9UPV0 1460 aa10.1□□□□□ -0.79
RPS3A-210ENST00000512690 NUBP1P53384 320 aa10.1□□□□□ -0.79
RPS3A-210ENST00000512690 CCDC88BA6NC98 1476 aa10.1□□□□□ -0.79
RPS3A-210ENST00000512690 KIF21AQ7Z4S6 1674 aa10.09□□□□□ -0.79
RPS3A-210ENST00000512690 ZBTB47Q9UFB7 747 aaPredicted RBP10.09□□□□□ -0.79
RPS3A-210ENST00000512690 CCDC61Q9Y6R9 512 aa10.09□□□□□ -0.79
RPS3A-210ENST00000512690 MS4A3Q96HJ5 214 aa10.07□□□□□ -0.8
RPS3A-210ENST00000512690 DCBLD2Q96PD2 775 aa10.07□□□□□ -0.8
RPS3A-210ENST00000512690 DCAF8Q5TAQ9 597 aa10.03□□□□□ -0.8
RPS3A-210ENST00000512690 KIF12Q96FN5 646 aa10.03□□□□□ -0.8
RPS3A-210ENST00000512690 MAP3K13O43283 966 aa10.02□□□□□ -0.81
RPS3A-210ENST00000512690 IFNLR1Q8IU57 520 aaPredicted RBP10.01□□□□□ -0.81
RPS3A-210ENST00000512690 URB2Q14146 1524 aaKnown RBP10.01□□□□□ -0.81
RPS3A-210ENST00000512690 FAM212AQ96EL1 285 aa10□□□□□ -0.81
RPS3A-210ENST00000512690 TRPC6Q9Y210 931 aa9.99□□□□□ -0.81
RPS3A-210ENST00000512690 ABCC8Q09428 1581 aa9.99□□□□□ -0.81
RPS3A-210ENST00000512690 PYGBP11216 843 aa9.95□□□□□ -0.82
RPS3A-210ENST00000512690 PELP1Q8IZL8 1130 aaKnown RBP9.95□□□□□ -0.82
RPS3A-210ENST00000512690 PRDM2Q13029 1718 aa9.95□□□□□ -0.82
RPS3A-210ENST00000512690 IFT140Q96RY7 1462 aa9.94□□□□□ -0.82
RPS3A-210ENST00000512690 TOPBP1Q92547 1522 aa9.93□□□□□ -0.82
RPS3A-210ENST00000512690 POTEB2H3BUK9 544 aa9.93□□□□□ -0.82
RPS3A-210ENST00000512690 PCDHB13Q9Y5F0 798 aa9.93□□□□□ -0.82
RPS3A-210ENST00000512690 SPOCK2Q92563 424 aa9.91□□□□□ -0.82
RPS3A-210ENST00000512690 DNMBPQ6XZF7 1577 aa9.9□□□□□ -0.82
RPS3A-210ENST00000512690 ATMINO43313 823 aaPredicted RBP9.9□□□□□ -0.82
RPS3A-210ENST00000512690 IFNL1Q8IU54 200 aa9.9□□□□□ -0.82
RPS3A-210ENST00000512690 CIZ1Q9ULV3 898 aaPredicted RBP9.89□□□□□ -0.83
RPS3A-210ENST00000512690 ATN1P54259 1190 aaPredicted RBP9.88□□□□□ -0.83
RPS3A-210ENST00000512690 BMP2KQ9NSY1 1161 aaPredicted RBP9.88□□□□□ -0.83
RPS3A-210ENST00000512690 GSE1Q14687 1217 aa9.86□□□□□ -0.83
RPS3A-210ENST00000512690 ASTLQ6HA08 431 aaPredicted RBP9.86□□□□□ -0.83
RPS3A-210ENST00000512690 OTUD5Q96G74 571 aa9.86□□□□□ -0.83
RPS3A-210ENST00000512690 PCDHB8Q9UN66 801 aa9.86□□□□□ -0.83
RPS3A-210ENST00000512690 ZNF608Q9ULD9 1512 aaPredicted RBP9.85□□□□□ -0.83
RPS3A-210ENST00000512690 POLA1P09884 1462 aaPredicted RBP9.85□□□□□ -0.83
RPS3A-210ENST00000512690 SUPT5HO00267 1087 aaKnown RBP9.84□□□□□ -0.83
RPS3A-210ENST00000512690 SOGA1O94964 1423 aa9.82□□□□□ -0.84
RPS3A-210ENST00000512690 TARBP1Q13395 1621 aaKnown RBP9.82□□□□□ -0.84
RPS3A-210ENST00000512690 TTLL13PA6NNM8 815 aa9.82□□□□□ -0.84
RPS3A-210ENST00000512690 TIE1P35590 1138 aa9.81□□□□□ -0.84
RPS3A-210ENST00000512690 SGIP1Q9BQI5 828 aa9.81□□□□□ -0.84
RPS3A-210ENST00000512690 METRNQ9UJH8 293 aa9.81□□□□□ -0.84
RPS3A-210ENST00000512690 WDR97A6NE52 1622 aa9.8□□□□□ -0.84
RPS3A-210ENST00000512690 AQRO60306 1485 aaKnown RBP eCLIP9.79□□□□□ -0.842e-9■■■■■ 47.7
RPS3A-210ENST00000512690 CUX1P39880 1505 aa9.79□□□□□ -0.84
RPS3A-210ENST00000512690 TMEM106CQ9BVX2 250 aa9.79□□□□□ -0.84
RPS3A-210ENST00000512690 POTEJP0CG39 1038 aa9.78□□□□□ -0.84
RPS3A-210ENST00000512690 FGD5Q6ZNL6 1462 aa9.78□□□□□ -0.84
RPS3A-210ENST00000512690 EIF4G3O43432 1585 aaKnown RBP9.77□□□□□ -0.85
RPS3A-210ENST00000512690 SLC39A7Q92504 469 aa9.77□□□□□ -0.85
RPS3A-210ENST00000512690 TRIM35Q9UPQ4 493 aa9.77□□□□□ -0.85
RPS3A-210ENST00000512690 RAD54L2Q9Y4B4 1467 aa9.77□□□□□ -0.85
RPS3A-210ENST00000512690 TDRD9Q8NDG6 1382 aaKnown RBP9.75□□□□□ -0.85
RPS3A-210ENST00000512690 C7P10643 843 aa9.75□□□□□ -0.85
RPS3A-210ENST00000512690 ABCA10Q8WWZ4 1543 aa9.73□□□□□ -0.85
RPS3A-210ENST00000512690 POTEFA5A3E0 1075 aa9.73□□□□□ -0.85
RPS3A-210ENST00000512690 GRIN2BQ13224 1484 aa9.72□□□□□ -0.85
RPS3A-210ENST00000512690 MAGI1Q96QZ7 1491 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms