RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 KIF13AQ9H1H9 1805 aa25.59■■□□□ 1.69
LETM1-207ENST00000512669 NPM1P06748 294 aaKnown RBP eCLIP25.51■■□□□ 1.67
LETM1-207ENST00000512669 MAPKBP1O60336 1514 aa25.5■■□□□ 1.67
LETM1-207ENST00000512669 CUL7Q14999 1698 aa25.48■■□□□ 1.67
LETM1-207ENST00000512669 KIAA0586Q9BVV6 1533 aa25.47■■□□□ 1.67
LETM1-207ENST00000512669 ABCC10Q5T3U5 1492 aa25.47■■□□□ 1.67
LETM1-207ENST00000512669 KIF27Q86VH2 1401 aa25.46■■□□□ 1.67
LETM1-207ENST00000512669 FAM69CQ0P6D2 419 aa25.42■■□□□ 1.66
LETM1-207ENST00000512669 IGF1RP08069 1367 aa25.42■■□□□ 1.66
LETM1-207ENST00000512669 ADCY10Q96PN6 1610 aa25.41■■□□□ 1.66
LETM1-207ENST00000512669 DIP2BQ9P265 1576 aa25.4■■□□□ 1.66
LETM1-207ENST00000512669 CARMIL1Q5VZK9 1371 aa25.26■■□□□ 1.63
LETM1-207ENST00000512669 PTPRGP23470 1445 aa25.26■■□□□ 1.63
LETM1-207ENST00000512669 CARMIL2Q6F5E8 1435 aa25.26■■□□□ 1.63
LETM1-207ENST00000512669 KDM6BO15054 1643 aa25.26■■□□□ 1.63
LETM1-207ENST00000512669 TNIKQ9UKE5 1360 aa25.21■■□□□ 1.63
LETM1-207ENST00000512669 IQGAP2Q13576 1575 aa25.19■■□□□ 1.62
LETM1-207ENST00000512669 ABCC2Q92887 1545 aa25.19■■□□□ 1.62
LETM1-207ENST00000512669 TSPOAP1O95153 1857 aa25.17■■□□□ 1.62
LETM1-207ENST00000512669 PLB1Q6P1J6 1458 aa25.15■■□□□ 1.62
LETM1-207ENST00000512669 UHRF1BP1LA0JNW5 1464 aa25.14■■□□□ 1.61
LETM1-207ENST00000512669 GLI2P10070 1586 aa25.11■■□□□ 1.61
LETM1-207ENST00000512669 ASXL2Q76L83 1435 aa25.09■■□□□ 1.61
LETM1-207ENST00000512669 UACAQ9BZF9 1416 aa25.08■■□□□ 1.61
LETM1-207ENST00000512669 TTBK1Q5TCY1 1321 aaPredicted RBP25.07■■□□□ 1.6
LETM1-207ENST00000512669 DISP1Q96F81 1524 aa25.05■■□□□ 1.6
LETM1-207ENST00000512669 RAPGEF2Q9Y4G8 1499 aa25.03■■□□□ 1.6
LETM1-207ENST00000512669 UGGT2Q9NYU1 1516 aa25.03■■□□□ 1.6
LETM1-207ENST00000512669 KDM4FA0A1W2PPD8 638 aa25.01■■□□□ 1.59
LETM1-207ENST00000512669 KDM5BQ9UGL1 1544 aa25■■□□□ 1.59
LETM1-207ENST00000512669 PPRC1Q5VV67 1664 aaKnown RBP25■■□□□ 1.59
LETM1-207ENST00000512669 KIAA0556O60303 1618 aa24.96■■□□□ 1.59
LETM1-207ENST00000512669 EPRSP07814 1512 aaKnown RBP24.95■■□□□ 1.58
LETM1-207ENST00000512669 TEX14Q8IWB6 1497 aa24.95■■□□□ 1.58
LETM1-207ENST00000512669 MAP3K4Q9Y6R4 1608 aa24.94■■□□□ 1.58
LETM1-207ENST00000512669 ZCCHC11Q5TAX3 1644 aaKnown RBP24.92■■□□□ 1.58
LETM1-207ENST00000512669 CTTNBP2Q8WZ74 1663 aa24.86■■□□□ 1.57
LETM1-207ENST00000512669 GOLGA3Q08378 1498 aa24.85■■□□□ 1.57
LETM1-207ENST00000512669 WDR7Q9Y4E6 1490 aa24.83■■□□□ 1.57
LETM1-207ENST00000512669 ADGRL1O94910 1474 aa24.83■■□□□ 1.56
LETM1-207ENST00000512669 COL17A1Q9UMD9 1497 aaPredicted RBP24.8■■□□□ 1.56
LETM1-207ENST00000512669 CFAP43Q8NDM7 1665 aa24.75■■□□□ 1.55
LETM1-207ENST00000512669 ABCA8O94911 1581 aa24.74■■□□□ 1.55
LETM1-207ENST00000512669 MAGI3Q5TCQ9 1506 aa24.73■■□□□ 1.55
LETM1-207ENST00000512669 PRXQ9BXM0 1461 aa24.7■■□□□ 1.54
LETM1-207ENST00000512669 CD109Q6YHK3 1445 aa24.69■■□□□ 1.54
LETM1-207ENST00000512669 FAM9AQ8IZU1 332 aaPredicted RBP24.69■■□□□ 1.54
LETM1-207ENST00000512669 KCNH8Q96L42 1107 aa24.6■■□□□ 1.53
LETM1-207ENST00000512669 HECW2Q9P2P5 1572 aa24.56■■□□□ 1.52
LETM1-207ENST00000512669 ARAP3Q8WWN8 1544 aa24.54■■□□□ 1.52
LETM1-207ENST00000512669 PHLDB1Q86UU1 1377 aa24.53■■□□□ 1.52
LETM1-207ENST00000512669 ILDR1Q86SU0 546 aaPredicted RBP24.5■■□□□ 1.51
LETM1-207ENST00000512669 ATP10BO94823 1461 aa24.5■■□□□ 1.51
LETM1-207ENST00000512669 ABCA9Q8IUA7 1624 aa24.49■■□□□ 1.51
LETM1-207ENST00000512669 SAMD9Q5K651 1589 aa24.48■■□□□ 1.51
LETM1-207ENST00000512669 CSRNP3Q8WYN3 585 aa24.47■■□□□ 1.51
LETM1-207ENST00000512669 KIF21BO75037 1637 aa24.46■■□□□ 1.51
LETM1-207ENST00000512669 RAPGEF6Q8TEU7 1601 aa24.43■■□□□ 1.5
LETM1-207ENST00000512669 NEO1Q92859 1461 aa24.41■■□□□ 1.5
LETM1-207ENST00000512669 P3H3Q8IVL6 736 aa24.41■■□□□ 1.5
LETM1-207ENST00000512669 ARID3CA6NKF2 412 aa24.39■■□□□ 1.49
LETM1-207ENST00000512669 EEA1Q15075 1411 aa24.37■■□□□ 1.49
LETM1-207ENST00000512669 CHIC1Q5VXU3 224 aa24.37■■□□□ 1.49
LETM1-207ENST00000512669 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.32■■□□□ 1.48
LETM1-207ENST00000512669 HNRNPUL2Q1KMD3 747 aaKnown RBP24.32■■□□□ 1.48
LETM1-207ENST00000512669 NUP153P49790 1475 aaKnown RBP24.32■■□□□ 1.48
LETM1-207ENST00000512669 ADAMTSL3P82987 1691 aa24.3■■□□□ 1.48
LETM1-207ENST00000512669 PTPRMP28827 1452 aa24.27■■□□□ 1.48
LETM1-207ENST00000512669 RAPGEF3O95398 923 aa24.27■■□□□ 1.48
LETM1-207ENST00000512669 FRMPD1Q5SYB0 1578 aa24.26■■□□□ 1.47
LETM1-207ENST00000512669 CFAP74Q9C0B2 1584 aa24.25■■□□□ 1.47
LETM1-207ENST00000512669 FHOD3Q2V2M9 1422 aa24.24■■□□□ 1.47
LETM1-207ENST00000512669 EFCAB5A4FU69 1503 aa24.24■■□□□ 1.47
LETM1-207ENST00000512669 BCORL1Q5H9F3 1711 aa24.24■■□□□ 1.47
LETM1-207ENST00000512669 PLEKHD1A6NEE1 506 aa24.23■■□□□ 1.47
LETM1-207ENST00000512669 ARHGEF40Q8TER5 1519 aa24.21■■□□□ 1.47
LETM1-207ENST00000512669 DENND4BO75064 1496 aaPredicted RBP24.2■■□□□ 1.47
LETM1-207ENST00000512669 ARID4BQ4LE39 1312 aaPredicted RBP24.18■■□□□ 1.46
LETM1-207ENST00000512669 RICTORQ6R327 1708 aa24.17■■□□□ 1.46
LETM1-207ENST00000512669 FANCAO15360 1455 aa24.17■■□□□ 1.46
LETM1-207ENST00000512669 AKNAQ7Z591 1439 aa24.17■■□□□ 1.46
LETM1-207ENST00000512669 MADDQ8WXG6 1647 aa24.17■■□□□ 1.46
LETM1-207ENST00000512669 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.15■■□□□ 1.46
LETM1-207ENST00000512669 RANGAP1P46060 587 aaPredicted RBP24.14■■□□□ 1.45
LETM1-207ENST00000512669 PCF11O94913 1555 aaKnown RBP24.13■■□□□ 1.45
LETM1-207ENST00000512669 ZMYM4Q5VZL5 1548 aa24.13■■□□□ 1.45
LETM1-207ENST00000512669 POGZQ7Z3K3 1410 aa24.11■■□□□ 1.45
LETM1-207ENST00000512669 FBXO41Q8TF61 875 aa24.1■■□□□ 1.45
LETM1-207ENST00000512669 MAGI2Q86UL8 1455 aa24.1■■□□□ 1.45
LETM1-207ENST00000512669 TTC37Q6PGP7 1564 aa24.1■■□□□ 1.45
LETM1-207ENST00000512669 RIMS1Q86UR5 1692 aaKnown RBP24.08■■□□□ 1.44
LETM1-207ENST00000512669 ZFYVE16Q7Z3T8 1539 aa24.07■■□□□ 1.44
LETM1-207ENST00000512669 LMTK3Q96Q04 1460 aa24.07■■□□□ 1.44
LETM1-207ENST00000512669 EHMT2Q96KQ7 1210 aa24.06■■□□□ 1.44
LETM1-207ENST00000512669 CDK13Q14004 1512 aaKnown RBP24.02■■□□□ 1.44
LETM1-207ENST00000512669 PLCH2O75038 1416 aa24.01■■□□□ 1.43
LETM1-207ENST00000512669 FMN1Q68DA7 1419 aa24.01■■□□□ 1.43
LETM1-207ENST00000512669 HECW1Q76N89 1606 aa24■■□□□ 1.43
LETM1-207ENST00000512669 YEATS2Q9ULM3 1422 aa23.98■■□□□ 1.43
LETM1-207ENST00000512669 UBTFP17480 764 aaKnown RBP23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms