RNA–Protein interactions for RNA: ENST00000512554.1

GCSHP1-201, Transcript of glycine cleavage system protein H pseudogene 1, humanhuman

BASIC

Gene GCSHP1, Length 484 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP1-201ENST00000512554 PEG3Q9GZU2 1588 aa13.28□□□□□ -0.28
GCSHP1-201ENST00000512554 SUPT5HO00267 1087 aaKnown RBP13.24□□□□□ -0.29
GCSHP1-201ENST00000512554 MNX1P50219 401 aaPredicted RBP13.21□□□□□ -0.29
GCSHP1-201ENST00000512554 ZRANB1Q9UGI0 708 aa13.18□□□□□ -0.3
GCSHP1-201ENST00000512554 WIZO95785 1651 aa13.18□□□□□ -0.3
GCSHP1-201ENST00000512554 FKBP8Q14318 412 aa13.16□□□□□ -0.3
GCSHP1-201ENST00000512554 EIF4G1Q04637 1599 aaKnown RBP13.15□□□□□ -0.3
GCSHP1-201ENST00000512554 SMARCA2P51531 1590 aa13.14□□□□□ -0.31
GCSHP1-201ENST00000512554 ATAD2BQ9ULI0 1458 aa13.12□□□□□ -0.31
GCSHP1-201ENST00000512554 TOP2AP11388 1531 aaKnown RBP13.12□□□□□ -0.31
GCSHP1-201ENST00000512554 ZNF579Q8NAF0 562 aaKnown RBP13.09□□□□□ -0.31
GCSHP1-201ENST00000512554 NCAPD3P42695 1498 aa13.09□□□□□ -0.31
GCSHP1-201ENST00000512554 POTEIP0CG38 1075 aa13.08□□□□□ -0.32
GCSHP1-201ENST00000512554 HMGXB3Q12766 1538 aa13.06□□□□□ -0.32
GCSHP1-201ENST00000512554 NPM1P06748 294 aaKnown RBP eCLIP13.05□□□□□ -0.32
GCSHP1-201ENST00000512554 PHF12Q96QT6 1004 aa13.05□□□□□ -0.32
GCSHP1-201ENST00000512554 GALR2O43603 387 aaPredicted RBP13.02□□□□□ -0.33
GCSHP1-201ENST00000512554 MIER1Q8N108 512 aa13.01□□□□□ -0.33
GCSHP1-201ENST00000512554 BAZ1BQ9UIG0 1483 aaKnown RBP12.98□□□□□ -0.33
GCSHP1-201ENST00000512554 PAK3O75914 559 aaPredicted RBP12.98□□□□□ -0.33
GCSHP1-201ENST00000512554 TSPYL2Q9H2G4 693 aaPredicted RBP12.96□□□□□ -0.33
GCSHP1-201ENST00000512554 CC2D2AQ9P2K1 1620 aa12.95□□□□□ -0.34
GCSHP1-201ENST00000512554 CCDC88BA6NC98 1476 aa12.94□□□□□ -0.34
GCSHP1-201ENST00000512554 CLCN6P51797 869 aa12.91□□□□□ -0.34
GCSHP1-201ENST00000512554 PLCD3Q8N3E9 789 aa12.91□□□□□ -0.34
GCSHP1-201ENST00000512554 DCBLD2Q96PD2 775 aa12.91□□□□□ -0.34
GCSHP1-201ENST00000512554 RASEFQ8IZ41 740 aa12.88□□□□□ -0.35
GCSHP1-201ENST00000512554 PLEKHG5O94827 1062 aa12.87□□□□□ -0.35
GCSHP1-201ENST00000512554 LHX8Q68G74 356 aa12.86□□□□□ -0.35
GCSHP1-201ENST00000512554 MS4A3Q96HJ5 214 aa12.86□□□□□ -0.35
GCSHP1-201ENST00000512554 CCDC61Q9Y6R9 512 aa12.86□□□□□ -0.35
GCSHP1-201ENST00000512554 PELP1Q8IZL8 1130 aaKnown RBP12.78□□□□□ -0.36
GCSHP1-201ENST00000512554 NUBP1P53384 320 aa12.77□□□□□ -0.37
GCSHP1-201ENST00000512554 KIF12Q96FN5 646 aa12.76□□□□□ -0.37
GCSHP1-201ENST00000512554 CFTRP13569 1480 aa12.75□□□□□ -0.37
GCSHP1-201ENST00000512554 TRPC6Q9Y210 931 aa12.75□□□□□ -0.37
GCSHP1-201ENST00000512554 MAP3K13O43283 966 aa12.72□□□□□ -0.37
GCSHP1-201ENST00000512554 FBXO3Q9UK99 471 aa12.7□□□□□ -0.38
GCSHP1-201ENST00000512554 PRDM2Q13029 1718 aa12.69□□□□□ -0.38
GCSHP1-201ENST00000512554 ATMINO43313 823 aaPredicted RBP12.69□□□□□ -0.38
GCSHP1-201ENST00000512554 CADPSQ9ULU8 1353 aa12.69□□□□□ -0.38
GCSHP1-201ENST00000512554 POTEB2H3BUK9 544 aa12.68□□□□□ -0.38
GCSHP1-201ENST00000512554 ZBTB47Q9UFB7 747 aaPredicted RBP12.68□□□□□ -0.38
GCSHP1-201ENST00000512554 ASTLQ6HA08 431 aaPredicted RBP12.67□□□□□ -0.38
GCSHP1-201ENST00000512554 VASPP50552 380 aaPredicted RBP12.65□□□□□ -0.38
GCSHP1-201ENST00000512554 ATN1P54259 1190 aaPredicted RBP12.63□□□□□ -0.39
GCSHP1-201ENST00000512554 LAMC3Q9Y6N6 1575 aa12.62□□□□□ -0.39
GCSHP1-201ENST00000512554 BMP2KQ9NSY1 1161 aaPredicted RBP12.62□□□□□ -0.39
GCSHP1-201ENST00000512554 FAM212AQ96EL1 285 aa12.6□□□□□ -0.39
GCSHP1-201ENST00000512554 METRNQ9UJH8 293 aa12.59□□□□□ -0.39
GCSHP1-201ENST00000512554 PCDHB13Q9Y5F0 798 aa12.58□□□□□ -0.4
GCSHP1-201ENST00000512554 WRNQ14191 1432 aaPredicted RBP eCLIP12.57□□□□□ -0.4
GCSHP1-201ENST00000512554 DCAF8Q5TAQ9 597 aa12.56□□□□□ -0.4
GCSHP1-201ENST00000512554 KLHL34Q8N239 644 aa12.56□□□□□ -0.4
GCSHP1-201ENST00000512554 IFNL1Q8IU54 200 aa12.55□□□□□ -0.4
GCSHP1-201ENST00000512554 TRIM41Q8WV44 630 aa12.55□□□□□ -0.4
GCSHP1-201ENST00000512554 ABCC8Q09428 1581 aa12.55□□□□□ -0.4
GCSHP1-201ENST00000512554 PYGBP11216 843 aa12.54□□□□□ -0.4
GCSHP1-201ENST00000512554 OTUD5Q96G74 571 aa12.54□□□□□ -0.4
GCSHP1-201ENST00000512554 BIVM-ERCC5R4GMW8 1640 aa12.54□□□□□ -0.4
GCSHP1-201ENST00000512554 TOP2BQ02880 1626 aa12.53□□□□□ -0.4
GCSHP1-201ENST00000512554 SLC39A7Q92504 469 aa12.53□□□□□ -0.4
GCSHP1-201ENST00000512554 TTLL13PA6NNM8 815 aa12.52□□□□□ -0.41
GCSHP1-201ENST00000512554 POTEJP0CG39 1038 aa12.52□□□□□ -0.41
GCSHP1-201ENST00000512554 TIE1P35590 1138 aa12.52□□□□□ -0.41
GCSHP1-201ENST00000512554 POTEFA5A3E0 1075 aa12.5□□□□□ -0.41
GCSHP1-201ENST00000512554 C7P10643 843 aa12.5□□□□□ -0.41
GCSHP1-201ENST00000512554 SYNJ1O43426 1573 aa12.5□□□□□ -0.41
GCSHP1-201ENST00000512554 FANCD2Q9BXW9 1451 aa12.49□□□□□ -0.41
GCSHP1-201ENST00000512554 IFNLR1Q8IU57 520 aaPredicted RBP12.49□□□□□ -0.41
GCSHP1-201ENST00000512554 PDS5BQ9NTI5 1447 aa12.48□□□□□ -0.41
GCSHP1-201ENST00000512554 NESP48681 1621 aa12.48□□□□□ -0.41
GCSHP1-201ENST00000512554 SGIP1Q9BQI5 828 aa12.47□□□□□ -0.41
GCSHP1-201ENST00000512554 CUX1P39880 1505 aa12.47□□□□□ -0.41
GCSHP1-201ENST00000512554 EEA1Q15075 1411 aa12.45□□□□□ -0.42
GCSHP1-201ENST00000512554 PCDHB8Q9UN66 801 aa12.44□□□□□ -0.42
GCSHP1-201ENST00000512554 TRIM35Q9UPQ4 493 aa12.44□□□□□ -0.42
GCSHP1-201ENST00000512554 COLQQ9Y215 455 aaPredicted RBP12.43□□□□□ -0.42
GCSHP1-201ENST00000512554 CEP164Q9UPV0 1460 aa12.42□□□□□ -0.42
GCSHP1-201ENST00000512554 TMEM106CQ9BVX2 250 aa12.42□□□□□ -0.42
GCSHP1-201ENST00000512554 DNMBPQ6XZF7 1577 aa12.41□□□□□ -0.42
GCSHP1-201ENST00000512554 TOPBP1Q92547 1522 aa12.37□□□□□ -0.43
GCSHP1-201ENST00000512554 KIF21AQ7Z4S6 1674 aa12.36□□□□□ -0.43
GCSHP1-201ENST00000512554 GSE1Q14687 1217 aa12.36□□□□□ -0.43
GCSHP1-201ENST00000512554 SPOCK2Q92563 424 aa12.35□□□□□ -0.43
GCSHP1-201ENST00000512554 URB2Q14146 1524 aaKnown RBP12.35□□□□□ -0.43
GCSHP1-201ENST00000512554 SEC24BO95487 1268 aa12.33□□□□□ -0.44
GCSHP1-201ENST00000512554 SOGA1O94964 1423 aa12.33□□□□□ -0.44
GCSHP1-201ENST00000512554 CIZ1Q9ULV3 898 aaPredicted RBP12.32□□□□□ -0.44
GCSHP1-201ENST00000512554 FGD5Q6ZNL6 1462 aa12.32□□□□□ -0.44
GCSHP1-201ENST00000512554 MRC2Q9UBG0 1479 aa12.31□□□□□ -0.44
GCSHP1-201ENST00000512554 POLA1P09884 1462 aaPredicted RBP12.3□□□□□ -0.44
GCSHP1-201ENST00000512554 WDR62O43379 1518 aa12.3□□□□□ -0.44
GCSHP1-201ENST00000512554 ABCA10Q8WWZ4 1543 aa12.3□□□□□ -0.44
GCSHP1-201ENST00000512554 IER5LQ5T953 404 aa12.28□□□□□ -0.44
GCSHP1-201ENST00000512554 RUSC2Q8N2Y8 1516 aa12.27□□□□□ -0.44
GCSHP1-201ENST00000512554 KIF27Q86VH2 1401 aa12.27□□□□□ -0.45
GCSHP1-201ENST00000512554 WDR97A6NE52 1622 aa12.26□□□□□ -0.45
GCSHP1-201ENST00000512554 KIF21BO75037 1637 aa12.26□□□□□ -0.45
GCSHP1-201ENST00000512554 CHRM1P11229 460 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms