RNA–Protein interactions for RNA: ENST00000512345.5

LDB2-214, Transcript of LIM domain binding 2, humanhuman

TSL 5

Gene LDB2, Length 923 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-214ENST00000512345 GRIN2AQ12879 1464 aa17.35■□□□□ 0.37
LDB2-214ENST00000512345 ADAMTS12P58397 1594 aa17.33■□□□□ 0.37
LDB2-214ENST00000512345 TRHP20396 242 aaPredicted RBP17.33■□□□□ 0.36
LDB2-214ENST00000512345 FHAD1B1AJZ9 1412 aa17.31■□□□□ 0.36
LDB2-214ENST00000512345 ERICH3Q5RHP9 1530 aa17.3■□□□□ 0.36
LDB2-214ENST00000512345 NUP160Q12769 1436 aa17.3■□□□□ 0.36
LDB2-214ENST00000512345 CEP170Q5SW79 1584 aa17.27■□□□□ 0.35
LDB2-214ENST00000512345 ERCC6L2Q5T890 1561 aa17.21■□□□□ 0.35
LDB2-214ENST00000512345 SHROOM2Q13796 1616 aa17.18■□□□□ 0.34
LDB2-214ENST00000512345 JPH4Q96JJ6 628 aa17.13■□□□□ 0.33
LDB2-214ENST00000512345 KIF27Q86VH2 1401 aa17.12■□□□□ 0.33
LDB2-214ENST00000512345 PRG4Q92954 1404 aaPredicted RBP17.12■□□□□ 0.33
LDB2-214ENST00000512345 IGF1RP08069 1367 aa17.11■□□□□ 0.33
LDB2-214ENST00000512345 PPP4R3CPQ6ZMV5 832 aa17.1■□□□□ 0.33
LDB2-214ENST00000512345 RUSC2Q8N2Y8 1516 aa17.08■□□□□ 0.32
LDB2-214ENST00000512345 MAPK8IP2Q13387 824 aaPredicted RBP17.08■□□□□ 0.32
LDB2-214ENST00000512345 DMRT2Q9Y5R5 561 aa17.08■□□□□ 0.32
LDB2-214ENST00000512345 CUL7Q14999 1698 aa17.04■□□□□ 0.32
LDB2-214ENST00000512345 KIAA0586Q9BVV6 1533 aa17.02■□□□□ 0.32
LDB2-214ENST00000512345 FAM9AQ8IZU1 332 aaPredicted RBP17.02■□□□□ 0.32
LDB2-214ENST00000512345 EEA1Q15075 1411 aa17■□□□□ 0.31
LDB2-214ENST00000512345 CARMIL1Q5VZK9 1371 aa17■□□□□ 0.31
LDB2-214ENST00000512345 CSRNP3Q8WYN3 585 aa16.94■□□□□ 0.3
LDB2-214ENST00000512345 NPM1P06748 294 aaKnown RBP eCLIP16.93■□□□□ 0.3
LDB2-214ENST00000512345 CACNB1Q02641 598 aaPredicted RBP16.89■□□□□ 0.29
LDB2-214ENST00000512345 ADCY10Q96PN6 1610 aa16.88■□□□□ 0.29
LDB2-214ENST00000512345 SLC4A1APQ9BWU0 796 aaKnown RBP16.88■□□□□ 0.29
LDB2-214ENST00000512345 KIF13AQ9H1H9 1805 aa16.87■□□□□ 0.29
LDB2-214ENST00000512345 MAPKBP1O60336 1514 aa16.87■□□□□ 0.29
LDB2-214ENST00000512345 PTPRGP23470 1445 aa16.87■□□□□ 0.29
LDB2-214ENST00000512345 CARMIL2Q6F5E8 1435 aa16.87■□□□□ 0.29
LDB2-214ENST00000512345 ABCC10Q5T3U5 1492 aa16.86■□□□□ 0.29
LDB2-214ENST00000512345 IQGAP2Q13576 1575 aa16.85■□□□□ 0.29
LDB2-214ENST00000512345 FAM69CQ0P6D2 419 aa16.85■□□□□ 0.29
LDB2-214ENST00000512345 TNIKQ9UKE5 1360 aa16.84■□□□□ 0.29
LDB2-214ENST00000512345 RAPGEF2Q9Y4G8 1499 aa16.84■□□□□ 0.29
LDB2-214ENST00000512345 TTBK1Q5TCY1 1321 aaPredicted RBP16.82■□□□□ 0.28
LDB2-214ENST00000512345 LOC105371045A0A1W2PR82 267 aa16.82■□□□□ 0.28
LDB2-214ENST00000512345 DIP2BQ9P265 1576 aa16.81■□□□□ 0.28
LDB2-214ENST00000512345 DISP1Q96F81 1524 aa16.78■□□□□ 0.28
LDB2-214ENST00000512345 PRXQ9BXM0 1461 aa16.78■□□□□ 0.28
LDB2-214ENST00000512345 KIF21BO75037 1637 aa16.78■□□□□ 0.28
LDB2-214ENST00000512345 NCBP3Q53F19 620 aaKnown RBP16.77■□□□□ 0.28
LDB2-214ENST00000512345 ABCC2Q92887 1545 aa16.76■□□□□ 0.27
LDB2-214ENST00000512345 UGGT2Q9NYU1 1516 aa16.76■□□□□ 0.27
LDB2-214ENST00000512345 UHRF1BP1LA0JNW5 1464 aa16.73■□□□□ 0.27
LDB2-214ENST00000512345 UACAQ9BZF9 1416 aa16.73■□□□□ 0.27
LDB2-214ENST00000512345 GOLGA3Q08378 1498 aa16.73■□□□□ 0.27
LDB2-214ENST00000512345 SCAF1Q9H7N4 1312 aaKnown RBP16.72■□□□□ 0.27
LDB2-214ENST00000512345 KIAA0556O60303 1618 aa16.7■□□□□ 0.26
LDB2-214ENST00000512345 ASXL2Q76L83 1435 aa16.7■□□□□ 0.26
LDB2-214ENST00000512345 PLB1Q6P1J6 1458 aa16.69■□□□□ 0.26
LDB2-214ENST00000512345 UBTFP17480 764 aaKnown RBP16.68■□□□□ 0.26
LDB2-214ENST00000512345 KDM5BQ9UGL1 1544 aa16.66■□□□□ 0.26
LDB2-214ENST00000512345 CTTNBP2Q8WZ74 1663 aa16.65■□□□□ 0.26
LDB2-214ENST00000512345 TSPOAP1O95153 1857 aa16.64■□□□□ 0.25
LDB2-214ENST00000512345 GLI2P10070 1586 aa16.64■□□□□ 0.25
LDB2-214ENST00000512345 KDM6BO15054 1643 aa16.63■□□□□ 0.25
LDB2-214ENST00000512345 NPM3O75607 178 aaKnown RBP16.63■□□□□ 0.25
LDB2-214ENST00000512345 EPRSP07814 1512 aaKnown RBP16.6■□□□□ 0.25
LDB2-214ENST00000512345 ZCCHC11Q5TAX3 1644 aaKnown RBP16.59■□□□□ 0.25
LDB2-214ENST00000512345 PPRC1Q5VV67 1664 aaKnown RBP16.56■□□□□ 0.24
LDB2-214ENST00000512345 ABCA8O94911 1581 aa16.55■□□□□ 0.24
LDB2-214ENST00000512345 WDR7Q9Y4E6 1490 aa16.54■□□□□ 0.24
LDB2-214ENST00000512345 MAP3K4Q9Y6R4 1608 aa16.52■□□□□ 0.24
LDB2-214ENST00000512345 TEX14Q8IWB6 1497 aa16.51■□□□□ 0.23
LDB2-214ENST00000512345 P3H3Q8IVL6 736 aa16.5■□□□□ 0.23
LDB2-214ENST00000512345 CEP162Q5TB80 1403 aa16.5■□□□□ 0.23
LDB2-214ENST00000512345 KDM4FA0A1W2PPD8 638 aa16.48■□□□□ 0.23
LDB2-214ENST00000512345 COL17A1Q9UMD9 1497 aaPredicted RBP16.48■□□□□ 0.23
LDB2-214ENST00000512345 RANGAP1P46060 587 aaPredicted RBP16.47■□□□□ 0.23
LDB2-214ENST00000512345 KCNH8Q96L42 1107 aa16.46■□□□□ 0.23
LDB2-214ENST00000512345 CLIP1P30622 1438 aa16.45■□□□□ 0.22
LDB2-214ENST00000512345 CD109Q6YHK3 1445 aa16.45■□□□□ 0.22
LDB2-214ENST00000512345 SAMD9Q5K651 1589 aa16.44■□□□□ 0.22
LDB2-214ENST00000512345 ATP10BO94823 1461 aa16.42■□□□□ 0.22
LDB2-214ENST00000512345 MAGI3Q5TCQ9 1506 aa16.42■□□□□ 0.22
LDB2-214ENST00000512345 ARID3CA6NKF2 412 aa16.42■□□□□ 0.22
LDB2-214ENST00000512345 CFAP43Q8NDM7 1665 aa16.41■□□□□ 0.22
LDB2-214ENST00000512345 DCAF8L1A6NGE4 600 aa16.4■□□□□ 0.22
LDB2-214ENST00000512345 CNKSR2Q8WXI2 1034 aa16.38■□□□□ 0.21
LDB2-214ENST00000512345 ARHGAP35Q9NRY4 1499 aa16.37■□□□□ 0.21
LDB2-214ENST00000512345 RAPGEF6Q8TEU7 1601 aa16.37■□□□□ 0.21
LDB2-214ENST00000512345 FHOD3Q2V2M9 1422 aa16.36■□□□□ 0.21
LDB2-214ENST00000512345 RNF39Q9H2S5 420 aa16.35■□□□□ 0.21
LDB2-214ENST00000512345 ADGRL1O94910 1474 aa16.35■□□□□ 0.21
LDB2-214ENST00000512345 EFCAB5A4FU69 1503 aa16.35■□□□□ 0.21
LDB2-214ENST00000512345 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.33■□□□□ 0.2
LDB2-214ENST00000512345 HNRNPUL2Q1KMD3 747 aaKnown RBP16.33■□□□□ 0.2
LDB2-214ENST00000512345 NUP153P49790 1475 aaKnown RBP16.33■□□□□ 0.2
LDB2-214ENST00000512345 ABCA9Q8IUA7 1624 aa16.3■□□□□ 0.2
LDB2-214ENST00000512345 ARAP3Q8WWN8 1544 aa16.29■□□□□ 0.2
LDB2-214ENST00000512345 PHLDB1Q86UU1 1377 aa16.28■□□□□ 0.2
LDB2-214ENST00000512345 ZBTB22O15209 634 aa16.27■□□□□ 0.2
LDB2-214ENST00000512345 VPS8Q8N3P4 1428 aa16.27■□□□□ 0.19
LDB2-214ENST00000512345 PLEKHD1A6NEE1 506 aa16.25■□□□□ 0.19
LDB2-214ENST00000512345 NEO1Q92859 1461 aa16.24■□□□□ 0.19
LDB2-214ENST00000512345 RAPGEF3O95398 923 aa16.21■□□□□ 0.19
LDB2-214ENST00000512345 FMN1Q68DA7 1419 aa16.2■□□□□ 0.18
LDB2-214ENST00000512345 HOXD11P31277 338 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms