RNA–Protein interactions for RNA: ENST00000512304.2

PROM1-213, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-213ENST00000512304 PRG4Q92954 1404 aaPredicted RBP16.95■□□□□ 0.3
PROM1-213ENST00000512304 ADAMTS12P58397 1594 aa16.93■□□□□ 0.3
PROM1-213ENST00000512304 SHROOM2Q13796 1616 aa16.92■□□□□ 0.3
PROM1-213ENST00000512304 ABCC10Q5T3U5 1492 aa16.91■□□□□ 0.3
PROM1-213ENST00000512304 JPH4Q96JJ6 628 aa16.89■□□□□ 0.29
PROM1-213ENST00000512304 FHAD1B1AJZ9 1412 aa16.87■□□□□ 0.29
PROM1-213ENST00000512304 ADRA2BP18089 450 aa16.87■□□□□ 0.29
PROM1-213ENST00000512304 PPP6R1Q9UPN7 881 aa16.85■□□□□ 0.29
PROM1-213ENST00000512304 WRNQ14191 1432 aaPredicted RBP eCLIP16.83■□□□□ 0.28
PROM1-213ENST00000512304 DIP2BQ9P265 1576 aa16.82■□□□□ 0.28
PROM1-213ENST00000512304 NPM1P06748 294 aaKnown RBP eCLIP16.8■□□□□ 0.28
PROM1-213ENST00000512304 KDM6BO15054 1643 aa16.78■□□□□ 0.28
PROM1-213ENST00000512304 ADCY10Q96PN6 1610 aa16.78■□□□□ 0.28
PROM1-213ENST00000512304 MAPKBP1O60336 1514 aa16.76■□□□□ 0.27
PROM1-213ENST00000512304 TTBK1Q5TCY1 1321 aaPredicted RBP16.75■□□□□ 0.27
PROM1-213ENST00000512304 ERICH3Q5RHP9 1530 aa16.71■□□□□ 0.27
PROM1-213ENST00000512304 ADGRL1O94910 1474 aa16.71■□□□□ 0.27
PROM1-213ENST00000512304 RUSC2Q8N2Y8 1516 aa16.7■□□□□ 0.26
PROM1-213ENST00000512304 COL17A1Q9UMD9 1497 aaPredicted RBP16.68■□□□□ 0.26
PROM1-213ENST00000512304 TSPOAP1O95153 1857 aa16.68■□□□□ 0.26
PROM1-213ENST00000512304 SUPT5HO00267 1087 aaKnown RBP16.66■□□□□ 0.26
PROM1-213ENST00000512304 TOP2BQ02880 1626 aa16.66■□□□□ 0.26
PROM1-213ENST00000512304 HECW2Q9P2P5 1572 aa16.64■□□□□ 0.25
PROM1-213ENST00000512304 BIVM-ERCC5R4GMW8 1640 aa16.63■□□□□ 0.25
PROM1-213ENST00000512304 POTEDQ86YR6 584 aa16.61■□□□□ 0.25
PROM1-213ENST00000512304 PTPRGP23470 1445 aa16.58■□□□□ 0.24
PROM1-213ENST00000512304 ASXL2Q76L83 1435 aa16.58■□□□□ 0.24
PROM1-213ENST00000512304 PPRC1Q5VV67 1664 aaKnown RBP16.56■□□□□ 0.24
PROM1-213ENST00000512304 KIAA0586Q9BVV6 1533 aa16.56■□□□□ 0.24
PROM1-213ENST00000512304 IGF1RP08069 1367 aa16.55■□□□□ 0.24
PROM1-213ENST00000512304 ABCC2Q92887 1545 aa16.51■□□□□ 0.23
PROM1-213ENST00000512304 TNIKQ9UKE5 1360 aa16.47■□□□□ 0.23
PROM1-213ENST00000512304 PLB1Q6P1J6 1458 aa16.47■□□□□ 0.23
PROM1-213ENST00000512304 GLI2P10070 1586 aa16.47■□□□□ 0.23
PROM1-213ENST00000512304 EPRSP07814 1512 aaKnown RBP16.45■□□□□ 0.22
PROM1-213ENST00000512304 FBXO41Q8TF61 875 aa16.45■□□□□ 0.22
PROM1-213ENST00000512304 UACAQ9BZF9 1416 aa16.41■□□□□ 0.22
PROM1-213ENST00000512304 UHRF1BP1LA0JNW5 1464 aa16.39■□□□□ 0.21
PROM1-213ENST00000512304 CUL7Q14999 1698 aa16.39■□□□□ 0.21
PROM1-213ENST00000512304 DISP1Q96F81 1524 aa16.38■□□□□ 0.21
PROM1-213ENST00000512304 CARMIL1Q5VZK9 1371 aa16.38■□□□□ 0.21
PROM1-213ENST00000512304 CARMIL2Q6F5E8 1435 aa16.37■□□□□ 0.21
PROM1-213ENST00000512304 MAP3K4Q9Y6R4 1608 aa16.37■□□□□ 0.21
PROM1-213ENST00000512304 KIF27Q86VH2 1401 aa16.36■□□□□ 0.21
PROM1-213ENST00000512304 KDM5BQ9UGL1 1544 aa16.35■□□□□ 0.21
PROM1-213ENST00000512304 KCNH8Q96L42 1107 aa16.33■□□□□ 0.2
PROM1-213ENST00000512304 TEX14Q8IWB6 1497 aa16.32■□□□□ 0.2
PROM1-213ENST00000512304 ZCCHC11Q5TAX3 1644 aaKnown RBP16.29■□□□□ 0.2
PROM1-213ENST00000512304 IQGAP2Q13576 1575 aa16.29■□□□□ 0.2
PROM1-213ENST00000512304 WDR7Q9Y4E6 1490 aa16.27■□□□□ 0.19
PROM1-213ENST00000512304 CD109Q6YHK3 1445 aa16.27■□□□□ 0.19
PROM1-213ENST00000512304 ARID3CA6NKF2 412 aa16.25■□□□□ 0.19
PROM1-213ENST00000512304 KIF21BO75037 1637 aa16.25■□□□□ 0.19
PROM1-213ENST00000512304 PTPRMP28827 1452 aa16.22■□□□□ 0.19
PROM1-213ENST00000512304 ILDR2Q71H61 639 aa16.22■□□□□ 0.19
PROM1-213ENST00000512304 MAGI3Q5TCQ9 1506 aa16.21■□□□□ 0.19
PROM1-213ENST00000512304 LMTK3Q96Q04 1460 aa16.2■□□□□ 0.18
PROM1-213ENST00000512304 RAPGEF3O95398 923 aa16.19■□□□□ 0.18
PROM1-213ENST00000512304 HSPA2P54652 639 aa16.19■□□□□ 0.18
PROM1-213ENST00000512304 UGGT2Q9NYU1 1516 aa16.19■□□□□ 0.18
PROM1-213ENST00000512304 KIAA0556O60303 1618 aa16.18■□□□□ 0.18
PROM1-213ENST00000512304 ADAMTSL3P82987 1691 aa16.11■□□□□ 0.17
PROM1-213ENST00000512304 RAPGEF2Q9Y4G8 1499 aa16.1■□□□□ 0.17
PROM1-213ENST00000512304 PCF11O94913 1555 aaKnown RBP16.1■□□□□ 0.17
PROM1-213ENST00000512304 ARID4BQ4LE39 1312 aaPredicted RBP16.1■□□□□ 0.17
PROM1-213ENST00000512304 ARAP3Q8WWN8 1544 aa16.09■□□□□ 0.17
PROM1-213ENST00000512304 ABCA8O94911 1581 aa16.09■□□□□ 0.17
PROM1-213ENST00000512304 P3H3Q8IVL6 736 aa16.08■□□□□ 0.16
PROM1-213ENST00000512304 CERKQ8TCT0 537 aa16.07■□□□□ 0.16
PROM1-213ENST00000512304 CFAP43Q8NDM7 1665 aa16.07■□□□□ 0.16
PROM1-213ENST00000512304 MADDQ8WXG6 1647 aa16.06■□□□□ 0.16
PROM1-213ENST00000512304 DISP3Q9P2K9 1392 aa16.06■□□□□ 0.16
PROM1-213ENST00000512304 ATP10BO94823 1461 aa16.03■□□□□ 0.16
PROM1-213ENST00000512304 SOCS7O14512 581 aa16.03■□□□□ 0.16
PROM1-213ENST00000512304 FRMPD1Q5SYB0 1578 aa16■□□□□ 0.15
PROM1-213ENST00000512304 BCORL1Q5H9F3 1711 aa15.99■□□□□ 0.15
PROM1-213ENST00000512304 MLECQ14165 292 aa15.97■□□□□ 0.15
PROM1-213ENST00000512304 RIMS1Q86UR5 1692 aaKnown RBP15.95■□□□□ 0.14
PROM1-213ENST00000512304 GOLGA3Q08378 1498 aa15.94■□□□□ 0.14
PROM1-213ENST00000512304 YEATS2Q9ULM3 1422 aa15.92■□□□□ 0.14
PROM1-213ENST00000512304 ABCA9Q8IUA7 1624 aa15.91■□□□□ 0.14
PROM1-213ENST00000512304 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.91■□□□□ 0.14
PROM1-213ENST00000512304 CEBPAP49715 358 aaPredicted RBP15.91■□□□□ 0.14
PROM1-213ENST00000512304 HNRNPUL2Q1KMD3 747 aaKnown RBP15.91■□□□□ 0.14
PROM1-213ENST00000512304 SIGLEC1Q9BZZ2 1709 aa15.91■□□□□ 0.14
PROM1-213ENST00000512304 NEO1Q92859 1461 aa15.91■□□□□ 0.14
PROM1-213ENST00000512304 PHLDB1Q86UU1 1377 aa15.9■□□□□ 0.14
PROM1-213ENST00000512304 ARHGEF40Q8TER5 1519 aa15.88■□□□□ 0.13
PROM1-213ENST00000512304 RANGAP1P46060 587 aaPredicted RBP15.86■□□□□ 0.13
PROM1-213ENST00000512304 DENND4BO75064 1496 aaPredicted RBP15.85■□□□□ 0.13
PROM1-213ENST00000512304 AKNAQ7Z591 1439 aa15.84■□□□□ 0.13
PROM1-213ENST00000512304 PRXQ9BXM0 1461 aa15.84■□□□□ 0.13
PROM1-213ENST00000512304 CTTNBP2Q8WZ74 1663 aa15.83■□□□□ 0.13
PROM1-213ENST00000512304 FHOD3Q2V2M9 1422 aa15.83■□□□□ 0.12
PROM1-213ENST00000512304 NUP153P49790 1475 aaKnown RBP15.81■□□□□ 0.12
PROM1-213ENST00000512304 SPATA31D1Q6ZQQ2 1576 aa15.79■□□□□ 0.12
PROM1-213ENST00000512304 FANCAO15360 1455 aa15.78■□□□□ 0.12
PROM1-213ENST00000512304 RICTORQ6R327 1708 aa15.77■□□□□ 0.12
PROM1-213ENST00000512304 ZFYVE16Q7Z3T8 1539 aa15.77■□□□□ 0.11
PROM1-213ENST00000512304 POGZQ7Z3K3 1410 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms