RNA–Protein interactions for RNA: ENST00000511298.1

CDS1-202, Transcript of CDP-diacylglycerol synthase 1, humanhuman

TSL 5

Gene CDS1, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDS1-202ENST00000511298 KIAA0586Q9BVV6 1533 aa36.9■■■■□ 3.5
CDS1-202ENST00000511298 ERCC6L2Q5T890 1561 aa36.88■■■■□ 3.49
CDS1-202ENST00000511298 PRG4Q92954 1404 aaPredicted RBP36.85■■■■□ 3.49
CDS1-202ENST00000511298 RAPGEF2Q9Y4G8 1499 aa36.84■■■■□ 3.49
CDS1-202ENST00000511298 CHIC1Q5VXU3 224 aa36.81■■■■□ 3.48
CDS1-202ENST00000511298 PRXQ9BXM0 1461 aa36.72■■■■□ 3.47
CDS1-202ENST00000511298 CSRNP3Q8WYN3 585 aa36.71■■■■□ 3.47
CDS1-202ENST00000511298 EEA1Q15075 1411 aa36.63■■■■□ 3.45
CDS1-202ENST00000511298 IQGAP2Q13576 1575 aa36.57■■■■□ 3.44
CDS1-202ENST00000511298 CARMIL2Q6F5E8 1435 aa36.49■■■■□ 3.43
CDS1-202ENST00000511298 FAM9AQ8IZU1 332 aaPredicted RBP36.48■■■■□ 3.43
CDS1-202ENST00000511298 UGGT2Q9NYU1 1516 aa36.44■■■■□ 3.42
CDS1-202ENST00000511298 TNIKQ9UKE5 1360 aa36.42■■■■□ 3.42
CDS1-202ENST00000511298 DISP1Q96F81 1524 aa36.42■■■■□ 3.42
CDS1-202ENST00000511298 PTPRGP23470 1445 aa36.42■■■■□ 3.42
CDS1-202ENST00000511298 TRHP20396 242 aaPredicted RBP36.4■■■■□ 3.42
CDS1-202ENST00000511298 TTBK1Q5TCY1 1321 aaPredicted RBP36.29■■■■□ 3.4
CDS1-202ENST00000511298 CTTNBP2Q8WZ74 1663 aa36.26■■■■□ 3.4
CDS1-202ENST00000511298 NPM1P06748 294 aaKnown RBP eCLIP36.24■■■■□ 3.39
CDS1-202ENST00000511298 KIAA0556O60303 1618 aa36.22■■■■□ 3.39
CDS1-202ENST00000511298 GOLGA3Q08378 1498 aa36.21■■■■□ 3.39
CDS1-202ENST00000511298 ADCY10Q96PN6 1610 aa36.21■■■■□ 3.39
CDS1-202ENST00000511298 KIF21BO75037 1637 aa36.16■■■■□ 3.38
CDS1-202ENST00000511298 UACAQ9BZF9 1416 aa36.16■■■■□ 3.38
CDS1-202ENST00000511298 UHRF1BP1LA0JNW5 1464 aa36.13■■■■□ 3.37
CDS1-202ENST00000511298 ABCC2Q92887 1545 aa36.06■■■■□ 3.36
CDS1-202ENST00000511298 MAPKBP1O60336 1514 aa36.05■■■■□ 3.36
CDS1-202ENST00000511298 P3H3Q8IVL6 736 aa36.03■■■■□ 3.36
CDS1-202ENST00000511298 UBTFP17480 764 aaKnown RBP35.98■■■■□ 3.35
CDS1-202ENST00000511298 EHMT2Q96KQ7 1210 aa35.98■■■■□ 3.35
CDS1-202ENST00000511298 PLB1Q6P1J6 1458 aa35.97■■■■□ 3.35
CDS1-202ENST00000511298 ABCC10Q5T3U5 1492 aa35.96■■■■□ 3.35
CDS1-202ENST00000511298 SAMD9Q5K651 1589 aa35.94■■■■□ 3.34
CDS1-202ENST00000511298 KDM5BQ9UGL1 1544 aa35.94■■■■□ 3.34
CDS1-202ENST00000511298 RANGAP1P46060 587 aaPredicted RBP35.94■■■■□ 3.34
CDS1-202ENST00000511298 FAM69CQ0P6D2 419 aa35.93■■■■□ 3.34
CDS1-202ENST00000511298 ABCA8O94911 1581 aa35.89■■■■□ 3.34
CDS1-202ENST00000511298 ASXL2Q76L83 1435 aa35.87■■■■□ 3.33
CDS1-202ENST00000511298 FHOD3Q2V2M9 1422 aa35.79■■■■□ 3.32
CDS1-202ENST00000511298 DIP2BQ9P265 1576 aa35.79■■■■□ 3.32
CDS1-202ENST00000511298 EFCAB5A4FU69 1503 aa35.77■■■■□ 3.32
CDS1-202ENST00000511298 KIF13AQ9H1H9 1805 aa35.76■■■■□ 3.32
CDS1-202ENST00000511298 ZCCHC11Q5TAX3 1644 aaKnown RBP35.73■■■■□ 3.31
CDS1-202ENST00000511298 ATP10BO94823 1461 aa35.67■■■■□ 3.3
CDS1-202ENST00000511298 EPRSP07814 1512 aaKnown RBP35.65■■■■□ 3.3
CDS1-202ENST00000511298 ARHGAP35Q9NRY4 1499 aa35.64■■■■□ 3.3
CDS1-202ENST00000511298 GLI2P10070 1586 aa35.64■■■■□ 3.3
CDS1-202ENST00000511298 WDR7Q9Y4E6 1490 aa35.63■■■■□ 3.29
CDS1-202ENST00000511298 ARID3CA6NKF2 412 aa35.62■■■■□ 3.29
CDS1-202ENST00000511298 RAPGEF6Q8TEU7 1601 aa35.6■■■■□ 3.29
CDS1-202ENST00000511298 NUP153P49790 1475 aaKnown RBP35.57■■■■□ 3.28
CDS1-202ENST00000511298 KCNH8Q96L42 1107 aa35.53■■■■□ 3.28
CDS1-202ENST00000511298 FMN1Q68DA7 1419 aa35.5■■■■□ 3.27
CDS1-202ENST00000511298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.47■■■■□ 3.27
CDS1-202ENST00000511298 HNRNPUL2Q1KMD3 747 aaKnown RBP35.47■■■■□ 3.27
CDS1-202ENST00000511298 MAP3K4Q9Y6R4 1608 aa35.39■■■■□ 3.26
CDS1-202ENST00000511298 PLEKHD1A6NEE1 506 aa35.38■■■■□ 3.25
CDS1-202ENST00000511298 CLIP1P30622 1438 aa35.38■■■■□ 3.25
CDS1-202ENST00000511298 CD109Q6YHK3 1445 aa35.36■■■■□ 3.25
CDS1-202ENST00000511298 PPRC1Q5VV67 1664 aaKnown RBP35.33■■■■□ 3.25
CDS1-202ENST00000511298 TSPOAP1O95153 1857 aa35.33■■■■□ 3.25
CDS1-202ENST00000511298 ATP1B4Q9UN42 357 aaPredicted RBP35.32■■■■□ 3.24
CDS1-202ENST00000511298 LOC105371045A0A1W2PR82 267 aa35.3■■■■□ 3.24
CDS1-202ENST00000511298 TEX14Q8IWB6 1497 aa35.29■■■■□ 3.24
CDS1-202ENST00000511298 MAGI3Q5TCQ9 1506 aa35.29■■■■□ 3.24
CDS1-202ENST00000511298 CDK13Q14004 1512 aaKnown RBP35.26■■■■□ 3.23
CDS1-202ENST00000511298 HECW1Q76N89 1606 aa35.23■■■■□ 3.23
CDS1-202ENST00000511298 CFAP43Q8NDM7 1665 aa35.23■■■■□ 3.23
CDS1-202ENST00000511298 CASKIN1Q8WXD9 1431 aa35.23■■■■□ 3.23
CDS1-202ENST00000511298 KDM6BO15054 1643 aa35.22■■■■□ 3.23
CDS1-202ENST00000511298 COL17A1Q9UMD9 1497 aaPredicted RBP35.21■■■■□ 3.23
CDS1-202ENST00000511298 ABCA9Q8IUA7 1624 aa35.18■■■■□ 3.22
CDS1-202ENST00000511298 CDK11AQ9UQ88 783 aaPredicted RBP35.18■■■■□ 3.22
CDS1-202ENST00000511298 CEP162Q5TB80 1403 aa35.17■■■■□ 3.22
CDS1-202ENST00000511298 PCF11O94913 1555 aaKnown RBP35.08■■■■□ 3.21
CDS1-202ENST00000511298 PHLDB1Q86UU1 1377 aa35.07■■■■□ 3.2
CDS1-202ENST00000511298 FYCO1Q9BQS8 1478 aa35.07■■■■□ 3.2
CDS1-202ENST00000511298 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.06■■■■□ 3.2
CDS1-202ENST00000511298 TROQ12816 1431 aaPredicted RBP35.04■■■■□ 3.2
CDS1-202ENST00000511298 CCDC18Q5T9S5 1454 aa35.03■■■■□ 3.2
CDS1-202ENST00000511298 NEO1Q92859 1461 aa34.99■■■■□ 3.19
CDS1-202ENST00000511298 ARAP3Q8WWN8 1544 aa34.99■■■■□ 3.19
CDS1-202ENST00000511298 LRRIQ1Q96JM4 1722 aa34.97■■■■□ 3.19
CDS1-202ENST00000511298 TTC37Q6PGP7 1564 aa34.93■■■■□ 3.18
CDS1-202ENST00000511298 PLCH2O75038 1416 aa34.93■■■■□ 3.18
CDS1-202ENST00000511298 FANCAO15360 1455 aa34.87■■■■□ 3.17
CDS1-202ENST00000511298 AKNAQ7Z591 1439 aa34.87■■■■□ 3.17
CDS1-202ENST00000511298 RAPGEF3O95398 923 aa34.85■■■■□ 3.17
CDS1-202ENST00000511298 KIF14Q15058 1648 aa34.84■■■■□ 3.17
CDS1-202ENST00000511298 EFCAB2Q5VUJ9 269 aa34.81■■■■□ 3.16
CDS1-202ENST00000511298 VPS8Q8N3P4 1428 aa34.77■■■■□ 3.16
CDS1-202ENST00000511298 DENND4BO75064 1496 aaPredicted RBP34.75■■■■□ 3.15
CDS1-202ENST00000511298 CFAP74Q9C0B2 1584 aa34.72■■■■□ 3.15
CDS1-202ENST00000511298 MTUS2Q5JR59 1369 aa34.71■■■■□ 3.15
CDS1-202ENST00000511298 KDM4FA0A1W2PPD8 638 aa34.7■■■■□ 3.15
CDS1-202ENST00000511298 SCAPERQ9BY12 1400 aa34.69■■■■□ 3.14
CDS1-202ENST00000511298 ADGRL1O94910 1474 aa34.67■■■■□ 3.14
CDS1-202ENST00000511298 FRMPD1Q5SYB0 1578 aa34.66■■■■□ 3.14
CDS1-202ENST00000511298 MYO5CQ9NQX4 1742 aa34.65■■■■□ 3.14
CDS1-202ENST00000511298 AEBP2Q6ZN18 517 aaPredicted RBP34.64■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms