RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 RIMBP3BA6NNM3 1639 aa4.52□□□□□ -1.69
CLOCK-209ENST00000511124 RIMBP3Q9UFD9 1639 aa4.52□□□□□ -1.69
CLOCK-209ENST00000511124 PHLDB1Q86UU1 1377 aa4.52□□□□□ -1.69
CLOCK-209ENST00000511124 SLC24A1O60721 1099 aa4.52□□□□□ -1.69
CLOCK-209ENST00000511124 CCDC88BA6NC98 1476 aa4.52□□□□□ -1.69
CLOCK-209ENST00000511124 RNF216Q9NWF9 866 aaPredicted RBP4.52□□□□□ -1.69
CLOCK-209ENST00000511124 PTPRGP23470 1445 aa4.51□□□□□ -1.69
CLOCK-209ENST00000511124 GOLGA3Q08378 1498 aa4.51□□□□□ -1.69
CLOCK-209ENST00000511124 ARHGEF11O15085 1522 aa4.51□□□□□ -1.69
CLOCK-209ENST00000511124 PLEKHD1A6NEE1 506 aa4.51□□□□□ -1.69
CLOCK-209ENST00000511124 ATP1B4Q9UN42 357 aaPredicted RBP4.51□□□□□ -1.69
CLOCK-209ENST00000511124 KIF21AQ7Z4S6 1674 aa4.5□□□□□ -1.69
CLOCK-209ENST00000511124 CNKSR2Q8WXI2 1034 aa4.5□□□□□ -1.69
CLOCK-209ENST00000511124 ERCC6L2Q5T890 1561 aa4.5□□□□□ -1.69
CLOCK-209ENST00000511124 AQRO60306 1485 aaKnown RBP eCLIP4.5□□□□□ -1.69
CLOCK-209ENST00000511124 SNAPC4Q5SXM2 1469 aa4.5□□□□□ -1.69
CLOCK-209ENST00000511124 PLB1Q6P1J6 1458 aa4.5□□□□□ -1.69
CLOCK-209ENST00000511124 URB2Q14146 1524 aaKnown RBP4.49□□□□□ -1.69
CLOCK-209ENST00000511124 WIZO95785 1651 aa4.49□□□□□ -1.69
CLOCK-209ENST00000511124 FGD5Q6ZNL6 1462 aa4.48□□□□□ -1.69
CLOCK-209ENST00000511124 TNIKQ9UKE5 1360 aa4.48□□□□□ -1.69
CLOCK-209ENST00000511124 KIF13AQ9H1H9 1805 aa4.48□□□□□ -1.69
CLOCK-209ENST00000511124 SLC4A2P04920 1241 aa4.48□□□□□ -1.69
CLOCK-209ENST00000511124 POLA1P09884 1462 aaPredicted RBP4.47□□□□□ -1.69
CLOCK-209ENST00000511124 UBTFP17480 764 aaKnown RBP4.47□□□□□ -1.69
CLOCK-209ENST00000511124 PRG4Q92954 1404 aaPredicted RBP4.47□□□□□ -1.69
CLOCK-209ENST00000511124 CARMIL1Q5VZK9 1371 aa4.45□□□□□ -1.7
CLOCK-209ENST00000511124 KCNH8Q96L42 1107 aa4.45□□□□□ -1.7
CLOCK-209ENST00000511124 CLASP1Q7Z460 1538 aa4.44□□□□□ -1.7
CLOCK-209ENST00000511124 ABCA10Q8WWZ4 1543 aa4.44□□□□□ -1.7
CLOCK-209ENST00000511124 EEA1Q15075 1411 aa4.44□□□□□ -1.7
CLOCK-209ENST00000511124 GRIN2AQ12879 1464 aa4.44□□□□□ -1.7
CLOCK-209ENST00000511124 ERICH3Q5RHP9 1530 aa4.44□□□□□ -1.7
CLOCK-209ENST00000511124 EFCAB2Q5VUJ9 269 aa4.43□□□□□ -1.7
CLOCK-209ENST00000511124 KIAA0586Q9BVV6 1533 aa4.43□□□□□ -1.7
CLOCK-209ENST00000511124 EIF4G3O43432 1585 aaKnown RBP4.43□□□□□ -1.7
CLOCK-209ENST00000511124 HDGFP51858 240 aaKnown RBP4.43□□□□□ -1.7
CLOCK-209ENST00000511124 SHROOM2Q13796 1616 aa4.43□□□□□ -1.7
CLOCK-209ENST00000511124 ZNF608Q9ULD9 1512 aaPredicted RBP4.42□□□□□ -1.7
CLOCK-209ENST00000511124 CLIP1P30622 1438 aa4.42□□□□□ -1.7
CLOCK-209ENST00000511124 RAD54L2Q9Y4B4 1467 aa4.42□□□□□ -1.7
CLOCK-209ENST00000511124 ARAP1Q96P48 1450 aa4.41□□□□□ -1.7
CLOCK-209ENST00000511124 TOP2BQ02880 1626 aa4.4□□□□□ -1.7
CLOCK-209ENST00000511124 UACAQ9BZF9 1416 aa4.4□□□□□ -1.71
CLOCK-209ENST00000511124 STAG3Q9UJ98 1225 aa4.4□□□□□ -1.71
CLOCK-209ENST00000511124 CSRNP3Q8WYN3 585 aa4.39□□□□□ -1.71
CLOCK-209ENST00000511124 NUP160Q12769 1436 aa4.39□□□□□ -1.71
CLOCK-209ENST00000511124 FBXO41Q8TF61 875 aa4.39□□□□□ -1.71
CLOCK-209ENST00000511124 RAPGEF2Q9Y4G8 1499 aa4.38□□□□□ -1.71
CLOCK-209ENST00000511124 AKNAQ7Z591 1439 aa4.38□□□□□ -1.71
CLOCK-209ENST00000511124 RSPH4AQ5TD94 716 aa4.38□□□□□ -1.71
CLOCK-209ENST00000511124 ABCC10Q5T3U5 1492 aa4.37□□□□□ -1.71
CLOCK-209ENST00000511124 CD109Q6YHK3 1445 aa4.37□□□□□ -1.71
CLOCK-209ENST00000511124 CUL7Q14999 1698 aa4.37□□□□□ -1.71
CLOCK-209ENST00000511124 DCAF8L1A6NGE4 600 aa4.37□□□□□ -1.71
CLOCK-209ENST00000511124 TSPY4P0CV99 314 aa4.37□□□□□ -1.71
CLOCK-209ENST00000511124 TSPY10P0CW01 314 aa4.37□□□□□ -1.71
CLOCK-209ENST00000511124 ACIN1Q9UKV3 1341 aaKnown RBP4.37□□□□□ -1.71
CLOCK-209ENST00000511124 RANGAP1P46060 587 aaPredicted RBP4.36□□□□□ -1.71
CLOCK-209ENST00000511124 BCANQ96GW7 911 aa4.36□□□□□ -1.71
CLOCK-209ENST00000511124 SCAF1Q9H7N4 1312 aaKnown RBP4.35□□□□□ -1.71
CLOCK-209ENST00000511124 CHD1O14646 1710 aa4.35□□□□□ -1.71
CLOCK-209ENST00000511124 TOM1O60784 492 aa4.35□□□□□ -1.71
CLOCK-209ENST00000511124 FANCAO15360 1455 aa4.34□□□□□ -1.71
CLOCK-209ENST00000511124 ABCC2Q92887 1545 aa4.34□□□□□ -1.71
CLOCK-209ENST00000511124 PPRC1Q5VV67 1664 aaKnown RBP4.34□□□□□ -1.71
CLOCK-209ENST00000511124 CUX1P39880 1505 aa4.34□□□□□ -1.71
CLOCK-209ENST00000511124 EID1Q9Y6B2 187 aa4.34□□□□□ -1.71
CLOCK-209ENST00000511124 CEP170Q5SW79 1584 aa4.34□□□□□ -1.71
CLOCK-209ENST00000511124 FMN1Q68DA7 1419 aa4.34□□□□□ -1.72
CLOCK-209ENST00000511124 TARBP1Q13395 1621 aaKnown RBP4.34□□□□□ -1.72
CLOCK-209ENST00000511124 ADAMTS12P58397 1594 aa4.33□□□□□ -1.72
CLOCK-209ENST00000511124 ASXL2Q76L83 1435 aa4.33□□□□□ -1.72
CLOCK-209ENST00000511124 MLECQ14165 292 aa4.33□□□□□ -1.72
CLOCK-209ENST00000511124 UHRF1BP1LA0JNW5 1464 aa4.33□□□□□ -1.72
CLOCK-209ENST00000511124 MAPKBP1O60336 1514 aa4.33□□□□□ -1.72
CLOCK-209ENST00000511124 IGF1RP08069 1367 aa4.32□□□□□ -1.72
CLOCK-209ENST00000511124 CNTLNQ9NXG0 1405 aa4.32□□□□□ -1.72
CLOCK-209ENST00000511124 DENND4BO75064 1496 aaPredicted RBP4.32□□□□□ -1.72
CLOCK-209ENST00000511124 KANK1Q14678 1352 aa4.32□□□□□ -1.72
CLOCK-209ENST00000511124 IQGAP2Q13576 1575 aa4.32□□□□□ -1.72
CLOCK-209ENST00000511124 P3H3Q8IVL6 736 aa4.32□□□□□ -1.72
CLOCK-209ENST00000511124 PKD2Q13563 968 aa4.31□□□□□ -1.72
CLOCK-209ENST00000511124 PLEKHH2Q8IVE3 1493 aa4.31□□□□□ -1.72
CLOCK-209ENST00000511124 ZNF777Q9ULD5 760 aaPredicted RBP4.31□□□□□ -1.72
CLOCK-209ENST00000511124 WDR7Q9Y4E6 1490 aa4.31□□□□□ -1.72
CLOCK-209ENST00000511124 C14orf37Q86TY3 774 aa4.31□□□□□ -1.72
CLOCK-209ENST00000511124 THEMISQ8N1K5 641 aaPredicted RBP4.31□□□□□ -1.72
CLOCK-209ENST00000511124 NEO1Q92859 1461 aa4.31□□□□□ -1.72
CLOCK-209ENST00000511124 PBRM1Q86U86 1689 aa4.3□□□□□ -1.72
CLOCK-209ENST00000511124 PPP1R15AO75807 674 aaPredicted RBP4.3□□□□□ -1.72
CLOCK-209ENST00000511124 CFDP1Q9UEE9 299 aaPredicted RBP4.3□□□□□ -1.72
CLOCK-209ENST00000511124 MTUS2Q5JR59 1369 aa4.3□□□□□ -1.72
CLOCK-209ENST00000511124 SPAG9O60271 1321 aaKnown RBP4.29□□□□□ -1.72
CLOCK-209ENST00000511124 ARID3CA6NKF2 412 aa4.29□□□□□ -1.72
CLOCK-209ENST00000511124 UHRF1BP1Q6BDS2 1440 aa4.29□□□□□ -1.72
CLOCK-209ENST00000511124 EHMT2Q96KQ7 1210 aa4.29□□□□□ -1.72
CLOCK-209ENST00000511124 MAGI2Q86UL8 1455 aa4.29□□□□□ -1.72
CLOCK-209ENST00000511124 HMGB2P26583 209 aaKnown RBP4.29□□□□□ -1.72
CLOCK-209ENST00000511124 ANKLE2Q86XL3 938 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms