RNA–Protein interactions for RNA: ENST00000510823.1

NEK11-211, Transcript of NIMA related kinase 11, humanhuman

TSL 4

Gene NEK11, Length 534 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11-211ENST00000510823 UNC13AQ9UPW8 1703 aa10.26□□□□□ -0.77
NEK11-211ENST00000510823 BICRAQ9NZM4 1560 aa10.24□□□□□ -0.77
NEK11-211ENST00000510823 PELP1Q8IZL8 1130 aaKnown RBP10.13□□□□□ -0.79
NEK11-211ENST00000510823 FAM163AQ96GL9 167 aaPredicted RBP10.13□□□□□ -0.79
NEK11-211ENST00000510823 LCE2DQ5TA82 110 aaPredicted RBP10.12□□□□□ -0.79
NEK11-211ENST00000510823 CSRNP3Q8WYN3 585 aa10.1□□□□□ -0.79
NEK11-211ENST00000510823 MAMSTRQ6ZN01 415 aa10.09□□□□□ -0.79
NEK11-211ENST00000510823 CECR2Q9BXF3 1484 aa10.09□□□□□ -0.79
NEK11-211ENST00000510823 POTEJP0CG39 1038 aa10.07□□□□□ -0.8
NEK11-211ENST00000510823 METRNQ9UJH8 293 aa10.07□□□□□ -0.8
NEK11-211ENST00000510823 PHF12Q96QT6 1004 aa10.06□□□□□ -0.8
NEK11-211ENST00000510823 PAK3O75914 559 aaPredicted RBP10.04□□□□□ -0.8
NEK11-211ENST00000510823 RSF1Q96T23 1441 aaPredicted RBP10.03□□□□□ -0.8
NEK11-211ENST00000510823 C7P10643 843 aa10.02□□□□□ -0.81
NEK11-211ENST00000510823 CREBZFQ9NS37 354 aa10.02□□□□□ -0.81
NEK11-211ENST00000510823 SLC39A7Q92504 469 aa10.01□□□□□ -0.81
NEK11-211ENST00000510823 MROH2BQ7Z745 1585 aa10.01□□□□□ -0.81
NEK11-211ENST00000510823 SCUBE2Q9NQ36 999 aa10□□□□□ -0.81
NEK11-211ENST00000510823 BAZ1AQ9NRL2 1556 aaPredicted RBP10□□□□□ -0.81
NEK11-211ENST00000510823 ASTLQ6HA08 431 aaPredicted RBP9.98□□□□□ -0.81
NEK11-211ENST00000510823 CDAN1Q8IWY9 1227 aa9.97□□□□□ -0.81
NEK11-211ENST00000510823 SMARCA4P51532 1647 aa9.96□□□□□ -0.81
NEK11-211ENST00000510823 STAG3Q9UJ98 1225 aa9.96□□□□□ -0.82
NEK11-211ENST00000510823 SUPT5HO00267 1087 aaKnown RBP9.95□□□□□ -0.82
NEK11-211ENST00000510823 ATMINO43313 823 aaPredicted RBP9.95□□□□□ -0.82
NEK11-211ENST00000510823 EIF4G1Q04637 1599 aaKnown RBP9.91□□□□□ -0.82
NEK11-211ENST00000510823 PEG3Q9GZU2 1588 aa9.9□□□□□ -0.82
NEK11-211ENST00000510823 MS4A3Q96HJ5 214 aa9.89□□□□□ -0.83
NEK11-211ENST00000510823 WIZO95785 1651 aa9.87□□□□□ -0.83
NEK11-211ENST00000510823 SPDYE4A6NLX3 237 aa9.87□□□□□ -0.83
NEK11-211ENST00000510823 ATAD2BQ9ULI0 1458 aa9.86□□□□□ -0.83
NEK11-211ENST00000510823 EHMT2Q96KQ7 1210 aa9.86□□□□□ -0.83
NEK11-211ENST00000510823 NPM1P06748 294 aaKnown RBP eCLIP9.84□□□□□ -0.83
NEK11-211ENST00000510823 NCAPD3P42695 1498 aa9.83□□□□□ -0.84
NEK11-211ENST00000510823 SMARCA2P51531 1590 aa9.83□□□□□ -0.84
NEK11-211ENST00000510823 ATN1P54259 1190 aaPredicted RBP9.81□□□□□ -0.84
NEK11-211ENST00000510823 TOP2AP11388 1531 aaKnown RBP9.8□□□□□ -0.84
NEK11-211ENST00000510823 MMRN1Q13201 1228 aa9.79□□□□□ -0.84
NEK11-211ENST00000510823 CC2D2AQ9P2K1 1620 aa9.78□□□□□ -0.84
NEK11-211ENST00000510823 POTEFA5A3E0 1075 aa9.77□□□□□ -0.85
NEK11-211ENST00000510823 HMGXB3Q12766 1538 aa9.77□□□□□ -0.85
NEK11-211ENST00000510823 BAZ1BQ9UIG0 1483 aaKnown RBP9.75□□□□□ -0.85
NEK11-211ENST00000510823 MNX1P50219 401 aaPredicted RBP9.73□□□□□ -0.85
NEK11-211ENST00000510823 SPNS2Q8IVW8 549 aa9.73□□□□□ -0.85
NEK11-211ENST00000510823 CCDC88BA6NC98 1476 aa9.72□□□□□ -0.85
NEK11-211ENST00000510823 ST18O60284 1047 aa9.71□□□□□ -0.86
NEK11-211ENST00000510823 BMP2KQ9NSY1 1161 aaPredicted RBP9.67□□□□□ -0.86
NEK11-211ENST00000510823 SEC24BO95487 1268 aa9.66□□□□□ -0.86
NEK11-211ENST00000510823 TSPYL2Q9H2G4 693 aaPredicted RBP9.64□□□□□ -0.87
NEK11-211ENST00000510823 COLQQ9Y215 455 aaPredicted RBP9.64□□□□□ -0.87
NEK11-211ENST00000510823 SLAIN1Q8ND83 568 aa9.62□□□□□ -0.87
NEK11-211ENST00000510823 TRPC6Q9Y210 931 aa9.61□□□□□ -0.87
NEK11-211ENST00000510823 KIF12Q96FN5 646 aa9.6□□□□□ -0.87
NEK11-211ENST00000510823 CCDC61Q9Y6R9 512 aa9.6□□□□□ -0.87
NEK11-211ENST00000510823 TIE1P35590 1138 aa9.59□□□□□ -0.87
NEK11-211ENST00000510823 PROM2Q8N271 834 aa9.57□□□□□ -0.88
NEK11-211ENST00000510823 CFTRP13569 1480 aa9.56□□□□□ -0.88
NEK11-211ENST00000510823 CADPSQ9ULU8 1353 aa9.54□□□□□ -0.88
NEK11-211ENST00000510823 TMEM121BQ9BXQ6 578 aaPredicted RBP9.53□□□□□ -0.88
NEK11-211ENST00000510823 TTLL13PA6NNM8 815 aa9.52□□□□□ -0.89
NEK11-211ENST00000510823 MAP3K13O43283 966 aa9.51□□□□□ -0.89
NEK11-211ENST00000510823 PLEKHG5O94827 1062 aa9.51□□□□□ -0.89
NEK11-211ENST00000510823 IER5LQ5T953 404 aa9.5□□□□□ -0.89
NEK11-211ENST00000510823 MIER1Q8N108 512 aa9.48□□□□□ -0.89
NEK11-211ENST00000510823 MARVELD3Q96A59 401 aa9.47□□□□□ -0.89
NEK11-211ENST00000510823 TRIM35Q9UPQ4 493 aa9.47□□□□□ -0.89
NEK11-211ENST00000510823 LAMC3Q9Y6N6 1575 aa9.46□□□□□ -0.89
NEK11-211ENST00000510823 NESP48681 1621 aa9.46□□□□□ -0.89
NEK11-211ENST00000510823 SNPHO15079 494 aa9.43□□□□□ -0.9
NEK11-211ENST00000510823 ABCC8Q09428 1581 aa9.41□□□□□ -0.9
NEK11-211ENST00000510823 FANCD2Q9BXW9 1451 aa9.4□□□□□ -0.9
NEK11-211ENST00000510823 WRNQ14191 1432 aaPredicted RBP eCLIP9.4□□□□□ -0.9
NEK11-211ENST00000510823 PRDM2Q13029 1718 aa9.4□□□□□ -0.9
NEK11-211ENST00000510823 PDS5BQ9NTI5 1447 aa9.39□□□□□ -0.91
NEK11-211ENST00000510823 PLCG2P16885 1265 aa9.39□□□□□ -0.91
NEK11-211ENST00000510823 TRIM41Q8WV44 630 aa9.39□□□□□ -0.91
NEK11-211ENST00000510823 RASEFQ8IZ41 740 aa9.37□□□□□ -0.91
NEK11-211ENST00000510823 PLCD3Q8N3E9 789 aa9.37□□□□□ -0.91
NEK11-211ENST00000510823 SYNJ1O43426 1573 aa9.36□□□□□ -0.91
NEK11-211ENST00000510823 CUX1P39880 1505 aa9.36□□□□□ -0.91
NEK11-211ENST00000510823 KRTAP3-3Q9BYR6 98 aa9.35□□□□□ -0.91
NEK11-211ENST00000510823 KRTAP3-2Q9BYR7 98 aa9.35□□□□□ -0.91
NEK11-211ENST00000510823 CEP164Q9UPV0 1460 aa9.34□□□□□ -0.91
NEK11-211ENST00000510823 EMP3P54852 163 aa9.34□□□□□ -0.91
NEK11-211ENST00000510823 ZBTB47Q9UFB7 747 aaPredicted RBP9.34□□□□□ -0.91
NEK11-211ENST00000510823 TOP2BQ02880 1626 aa9.34□□□□□ -0.91
NEK11-211ENST00000510823 BIVM-ERCC5R4GMW8 1640 aa9.33□□□□□ -0.92
NEK11-211ENST00000510823 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.32□□□□□ -0.92
NEK11-211ENST00000510823 PCDHB13Q9Y5F0 798 aa9.32□□□□□ -0.92
NEK11-211ENST00000510823 URB2Q14146 1524 aaKnown RBP9.31□□□□□ -0.92
NEK11-211ENST00000510823 SGIP1Q9BQI5 828 aa9.31□□□□□ -0.92
NEK11-211ENST00000510823 TOPBP1Q92547 1522 aa9.3□□□□□ -0.92
NEK11-211ENST00000510823 KIF21AQ7Z4S6 1674 aa9.29□□□□□ -0.92
NEK11-211ENST00000510823 DNMBPQ6XZF7 1577 aa9.29□□□□□ -0.92
NEK11-211ENST00000510823 IRX5P78411 483 aaPredicted RBP9.29□□□□□ -0.92
NEK11-211ENST00000510823 HS3ST6Q96QI5 342 aa9.29□□□□□ -0.92
NEK11-211ENST00000510823 POTEB3A0JP26 581 aa9.28□□□□□ -0.92
NEK11-211ENST00000510823 POTEBQ6S5H4 581 aa9.28□□□□□ -0.92
NEK11-211ENST00000510823 TMEM106CQ9BVX2 250 aa9.28□□□□□ -0.92
NEK11-211ENST00000510823 MRC2Q9UBG0 1479 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms