RNA–Protein interactions for RNA: ENST00000510576.6

CLMAT3-201, colorectal liver metastasis associated transcript 3, humanhuman

TSL 1 (best) BASIC

Gene CLMAT3, Length 1,973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-201ENST00000510576 EFCAB5A4FU69 1503 aa24.82■■□□□ 1.56
CLMAT3-201ENST00000510576 CFAP43Q8NDM7 1665 aa24.78■■□□□ 1.56
CLMAT3-201ENST00000510576 PCF11O94913 1555 aaKnown RBP24.77■■□□□ 1.56
CLMAT3-201ENST00000510576 GAPVD1Q14C86 1478 aa24.77■■□□□ 1.56
CLMAT3-201ENST00000510576 TDRD9Q8NDG6 1382 aaKnown RBP24.73■■□□□ 1.55
CLMAT3-201ENST00000510576 CCNB3Q8WWL7 1395 aa24.73■■□□□ 1.55
CLMAT3-201ENST00000510576 TARBP1Q13395 1621 aaKnown RBP24.73■■□□□ 1.55
CLMAT3-201ENST00000510576 THOC2Q8NI27 1593 aaKnown RBP24.72■■□□□ 1.55
CLMAT3-201ENST00000510576 MRC2Q9UBG0 1479 aa24.72■■□□□ 1.55
CLMAT3-201ENST00000510576 LRRC9Q6ZRR7 1453 aa24.71■■□□□ 1.55
CLMAT3-201ENST00000510576 FHOD3Q2V2M9 1422 aa24.7■■□□□ 1.54
CLMAT3-201ENST00000510576 FYCO1Q9BQS8 1478 aa24.68■■□□□ 1.54
CLMAT3-201ENST00000510576 P3H3Q8IVL6 736 aa24.68■■□□□ 1.54
CLMAT3-201ENST00000510576 AQRO60306 1485 aaKnown RBP eCLIP24.66■■□□□ 1.54
CLMAT3-201ENST00000510576 PBRM1Q86U86 1689 aa24.64■■□□□ 1.54
CLMAT3-201ENST00000510576 WDR62O43379 1518 aa24.63■■□□□ 1.53
CLMAT3-201ENST00000510576 CASKIN1Q8WXD9 1431 aa24.63■■□□□ 1.53
CLMAT3-201ENST00000510576 SAMD9Q5K651 1589 aa24.61■■□□□ 1.53
CLMAT3-201ENST00000510576 CLSPNQ9HAW4 1339 aa24.61■■□□□ 1.53
CLMAT3-201ENST00000510576 DHX57Q6P158 1386 aaKnown RBP24.59■■□□□ 1.53
CLMAT3-201ENST00000510576 FMN1Q68DA7 1419 aa24.59■■□□□ 1.53
CLMAT3-201ENST00000510576 DIEXFQ68CQ4 756 aaKnown RBP24.58■■□□□ 1.53
CLMAT3-201ENST00000510576 ZNF316A6NFI3 1004 aaPredicted RBP24.56■■□□□ 1.52
CLMAT3-201ENST00000510576 ATP1B4Q9UN42 357 aaPredicted RBP24.56■■□□□ 1.52
CLMAT3-201ENST00000510576 PHLDB1Q86UU1 1377 aa24.53■■□□□ 1.52
CLMAT3-201ENST00000510576 SNAPC4Q5SXM2 1469 aa24.52■■□□□ 1.52
CLMAT3-201ENST00000510576 ADAMTS12P58397 1594 aa24.49■■□□□ 1.51
CLMAT3-201ENST00000510576 ITGAEP38570 1179 aa24.49■■□□□ 1.51
CLMAT3-201ENST00000510576 LRRIQ1Q96JM4 1722 aa24.44■■□□□ 1.5
CLMAT3-201ENST00000510576 GRIN2BQ13224 1484 aa24.44■■□□□ 1.5
CLMAT3-201ENST00000510576 IFT140Q96RY7 1462 aa24.44■■□□□ 1.5
CLMAT3-201ENST00000510576 IQGAP2Q13576 1575 aa24.41■■□□□ 1.5
CLMAT3-201ENST00000510576 RAB3GAP2Q9H2M9 1393 aa24.4■■□□□ 1.5
CLMAT3-201ENST00000510576 FAM50AQ14320 339 aaKnown RBP24.4■■□□□ 1.5
CLMAT3-201ENST00000510576 SETD5Q9C0A6 1442 aa24.38■■□□□ 1.49
CLMAT3-201ENST00000510576 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.36■■□□□ 1.49
CLMAT3-201ENST00000510576 MTUS2Q5JR59 1369 aa24.35■■□□□ 1.49
CLMAT3-201ENST00000510576 ZNF608Q9ULD9 1512 aaPredicted RBP24.33■■□□□ 1.49
CLMAT3-201ENST00000510576 SUPT6HQ7KZ85 1726 aaKnown RBP24.31■■□□□ 1.48
CLMAT3-201ENST00000510576 EHBP1L1Q8N3D4 1523 aa24.31■■□□□ 1.48
CLMAT3-201ENST00000510576 FGD6Q6ZV73 1430 aa24.31■■□□□ 1.48
CLMAT3-201ENST00000510576 HECW1Q76N89 1606 aa24.3■■□□□ 1.48
CLMAT3-201ENST00000510576 CCDC18Q5T9S5 1454 aa24.29■■□□□ 1.48
CLMAT3-201ENST00000510576 EIF4G3O43432 1585 aaKnown RBP24.28■■□□□ 1.48
CLMAT3-201ENST00000510576 MAPKBP1O60336 1514 aa24.26■■□□□ 1.47
CLMAT3-201ENST00000510576 UGGT2Q9NYU1 1516 aa24.26■■□□□ 1.47
CLMAT3-201ENST00000510576 NCOA2Q15596 1464 aa24.25■■□□□ 1.47
CLMAT3-201ENST00000510576 MYOM3Q5VTT5 1437 aa24.21■■□□□ 1.47
CLMAT3-201ENST00000510576 KIAA0586Q9BVV6 1533 aa24.18■■□□□ 1.46
CLMAT3-201ENST00000510576 MAGI3Q5TCQ9 1506 aa24.17■■□□□ 1.46
CLMAT3-201ENST00000510576 ARHGEF11O15085 1522 aa24.17■■□□□ 1.46
CLMAT3-201ENST00000510576 GRIN2AQ12879 1464 aa24.16■■□□□ 1.46
CLMAT3-201ENST00000510576 EPRSP07814 1512 aaKnown RBP24.15■■□□□ 1.46
CLMAT3-201ENST00000510576 KIAA0556O60303 1618 aa24.15■■□□□ 1.46
CLMAT3-201ENST00000510576 PTPN23Q9H3S7 1636 aa24.14■■□□□ 1.46
CLMAT3-201ENST00000510576 MAGI1Q96QZ7 1491 aaPredicted RBP24.12■■□□□ 1.45
CLMAT3-201ENST00000510576 CENPBP07199 599 aaPredicted RBP24.11■■□□□ 1.45
CLMAT3-201ENST00000510576 ACIN1Q9UKV3 1341 aaKnown RBP24.1■■□□□ 1.45
CLMAT3-201ENST00000510576 CDK13Q14004 1512 aaKnown RBP24.09■■□□□ 1.45
CLMAT3-201ENST00000510576 DISP1Q96F81 1524 aa24.09■■□□□ 1.45
CLMAT3-201ENST00000510576 SCAF1Q9H7N4 1312 aaKnown RBP24.08■■□□□ 1.45
CLMAT3-201ENST00000510576 HFM1A2PYH4 1435 aa24.08■■□□□ 1.44
CLMAT3-201ENST00000510576 MIER1Q8N108 512 aa24.07■■□□□ 1.44
CLMAT3-201ENST00000510576 PTPRKQ15262 1439 aa24.06■■□□□ 1.44
CLMAT3-201ENST00000510576 TCOF1Q13428 1488 aaKnown RBP24.05■■□□□ 1.44
CLMAT3-201ENST00000510576 SYNJ2O15056 1496 aa24.05■■□□□ 1.44
CLMAT3-201ENST00000510576 RAPGEF6Q8TEU7 1601 aa24.03■■□□□ 1.44
CLMAT3-201ENST00000510576 NEUROD1Q13562 356 aa24.03■■□□□ 1.44
CLMAT3-201ENST00000510576 CEP170Q5SW79 1584 aa24.02■■□□□ 1.44
CLMAT3-201ENST00000510576 NAIPQ13075 1403 aa23.99■■□□□ 1.43
CLMAT3-201ENST00000510576 MIA2Q96PC5 1412 aa23.98■■□□□ 1.43
CLMAT3-201ENST00000510576 CHMP7Q8WUX9 453 aaPredicted RBP23.98■■□□□ 1.43
CLMAT3-201ENST00000510576 UACAQ9BZF9 1416 aa23.97■■□□□ 1.43
CLMAT3-201ENST00000510576 GCC2Q8IWJ2 1684 aa23.97■■□□□ 1.43
CLMAT3-201ENST00000510576 SIN3AQ96ST3 1273 aa23.96■■□□□ 1.43
CLMAT3-201ENST00000510576 TIMELESSQ9UNS1 1208 aa23.96■■□□□ 1.43
CLMAT3-201ENST00000510576 NUP153P49790 1475 aaKnown RBP23.96■■□□□ 1.43
CLMAT3-201ENST00000510576 ARID3CA6NKF2 412 aa23.93■■□□□ 1.42
CLMAT3-201ENST00000510576 NUP160Q12769 1436 aa23.91■■□□□ 1.42
CLMAT3-201ENST00000510576 AKNAQ7Z591 1439 aa23.9■■□□□ 1.42
CLMAT3-201ENST00000510576 FBLN2P98095 1184 aa23.87■■□□□ 1.41
CLMAT3-201ENST00000510576 CARMIL2Q6F5E8 1435 aa23.87■■□□□ 1.41
CLMAT3-201ENST00000510576 YTHDC1Q96MU7 727 aaKnown RBP23.87■■□□□ 1.41
CLMAT3-201ENST00000510576 CDK11AQ9UQ88 783 aaPredicted RBP23.85■■□□□ 1.41
CLMAT3-201ENST00000510576 RRP7BPQ9NSQ0 103 aa23.82■■□□□ 1.4
CLMAT3-201ENST00000510576 CHIC2Q9UKJ5 165 aa23.81■■□□□ 1.4
CLMAT3-201ENST00000510576 DNMT1P26358 1616 aaKnown RBP23.81■■□□□ 1.4
CLMAT3-201ENST00000510576 PLB1Q6P1J6 1458 aa23.8■■□□□ 1.4
CLMAT3-201ENST00000510576 TONSLQ96HA7 1378 aa23.8■■□□□ 1.4
CLMAT3-201ENST00000510576 ITSN2Q9NZM3 1697 aa23.79■■□□□ 1.4
CLMAT3-201ENST00000510576 TROQ12816 1431 aaPredicted RBP23.79■■□□□ 1.4
CLMAT3-201ENST00000510576 JPH4Q96JJ6 628 aa23.79■■□□□ 1.4
CLMAT3-201ENST00000510576 ADCY10Q96PN6 1610 aa23.79■■□□□ 1.4
CLMAT3-201ENST00000510576 PPP1R15AO75807 674 aaPredicted RBP23.78■■□□□ 1.4
CLMAT3-201ENST00000510576 KDM6BO15054 1643 aa23.77■■□□□ 1.4
CLMAT3-201ENST00000510576 DAPK1P53355 1430 aa23.77■■□□□ 1.4
CLMAT3-201ENST00000510576 GTF3C3Q9Y5Q9 886 aa23.74■■□□□ 1.39
CLMAT3-201ENST00000510576 PRG4Q92954 1404 aaPredicted RBP23.74■■□□□ 1.39
CLMAT3-201ENST00000510576 ROCK1Q13464 1354 aa23.74■■□□□ 1.39
CLMAT3-201ENST00000510576 ABCA8O94911 1581 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms