RNA–Protein interactions for RNA: ENST00000510361.5

SDHA-213, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2 BASIC

Gene SDHA, Length 2,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-213ENST00000510361 IGF1RP08069 1367 aa27.67■■■□□ 2.02
SDHA-213ENST00000510361 FHAD1B1AJZ9 1412 aa27.67■■■□□ 2.02
SDHA-213ENST00000510361 CUL7Q14999 1698 aa27.61■■■□□ 2.01
SDHA-213ENST00000510361 GRIN2AQ12879 1464 aa27.59■■■□□ 2.01
SDHA-213ENST00000510361 PRXQ9BXM0 1461 aa27.57■■■□□ 2
SDHA-213ENST00000510361 CLIP1P30622 1438 aa27.56■■■□□ 2
SDHA-213ENST00000510361 ZEB1P37275 1124 aaPredicted RBP27.55■■■□□ 2
SDHA-213ENST00000510361 CARMIL1Q5VZK9 1371 aa27.52■■■□□ 2
SDHA-213ENST00000510361 CLASP1Q7Z460 1538 aa27.46■■□□□ 1.99
SDHA-213ENST00000510361 NUP160Q12769 1436 aa27.45■■□□□ 1.99
SDHA-213ENST00000510361 CEP170Q5SW79 1584 aa27.45■■□□□ 1.99
SDHA-213ENST00000510361 VPS8Q8N3P4 1428 aa27.43■■□□□ 1.98
SDHA-213ENST00000510361 TTBK1Q5TCY1 1321 aaPredicted RBP27.42■■□□□ 1.98
SDHA-213ENST00000510361 ARHGEF11O15085 1522 aa27.28■■□□□ 1.96
SDHA-213ENST00000510361 RIMBP3CA6NJZ7 1639 aa27.27■■□□□ 1.96
SDHA-213ENST00000510361 RIMBP3BA6NNM3 1639 aa27.27■■□□□ 1.96
SDHA-213ENST00000510361 RIMBP3Q9UFD9 1639 aa27.27■■□□□ 1.96
SDHA-213ENST00000510361 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.26■■□□□ 1.95
SDHA-213ENST00000510361 ARAP1Q96P48 1450 aa27.25■■□□□ 1.95
SDHA-213ENST00000510361 KIAA0586Q9BVV6 1533 aa27.25■■□□□ 1.95
SDHA-213ENST00000510361 RANGAP1P46060 587 aaPredicted RBP27.25■■□□□ 1.95
SDHA-213ENST00000510361 SHROOM2Q13796 1616 aa27.23■■□□□ 1.95
SDHA-213ENST00000510361 JPH4Q96JJ6 628 aa27.18■■□□□ 1.94
SDHA-213ENST00000510361 IQGAP2Q13576 1575 aa27.15■■□□□ 1.94
SDHA-213ENST00000510361 CTTNBP2Q8WZ74 1663 aa27.14■■□□□ 1.94
SDHA-213ENST00000510361 CCER1Q8TC90 406 aaPredicted RBP27.13■■□□□ 1.93
SDHA-213ENST00000510361 ERCC6L2Q5T890 1561 aa27.12■■□□□ 1.93
SDHA-213ENST00000510361 PRG4Q92954 1404 aaPredicted RBP27.11■■□□□ 1.93
SDHA-213ENST00000510361 ARHGAP35Q9NRY4 1499 aa27.09■■□□□ 1.93
SDHA-213ENST00000510361 APLP2Q06481 763 aa27.08■■□□□ 1.93
SDHA-213ENST00000510361 CYB5RLQ6IPT4 315 aa27.01■■□□□ 1.91
SDHA-213ENST00000510361 UGGT2Q9NYU1 1516 aa27■■□□□ 1.91
SDHA-213ENST00000510361 CARMIL2Q6F5E8 1435 aa26.95■■□□□ 1.91
SDHA-213ENST00000510361 DISP1Q96F81 1524 aa26.94■■□□□ 1.9
SDHA-213ENST00000510361 KANK4Q5T7N3 995 aaPredicted RBP26.93■■□□□ 1.9
SDHA-213ENST00000510361 HNRNPUL2Q1KMD3 747 aaKnown RBP26.89■■□□□ 1.9
SDHA-213ENST00000510361 KIAA0556O60303 1618 aa26.89■■□□□ 1.89
SDHA-213ENST00000510361 PTPRGP23470 1445 aa26.82■■□□□ 1.88
SDHA-213ENST00000510361 SAMD9Q5K651 1589 aa26.79■■□□□ 1.88
SDHA-213ENST00000510361 RRBP1Q9P2E9 1410 aaKnown RBP26.76■■□□□ 1.87
SDHA-213ENST00000510361 MAP3K1Q13233 1512 aa26.76■■□□□ 1.87
SDHA-213ENST00000510361 P3H3Q8IVL6 736 aa26.73■■□□□ 1.87
SDHA-213ENST00000510361 TIAM1Q13009 1591 aa26.72■■□□□ 1.87
SDHA-213ENST00000510361 EFCAB5A4FU69 1503 aa26.71■■□□□ 1.87
SDHA-213ENST00000510361 ADCY10Q96PN6 1610 aa26.68■■□□□ 1.86
SDHA-213ENST00000510361 UACAQ9BZF9 1416 aa26.64■■□□□ 1.86
SDHA-213ENST00000510361 PCF11O94913 1555 aaKnown RBP26.64■■□□□ 1.86
SDHA-213ENST00000510361 FHOD3Q2V2M9 1422 aa26.64■■□□□ 1.85
SDHA-213ENST00000510361 UHRF1BP1LA0JNW5 1464 aa26.61■■□□□ 1.85
SDHA-213ENST00000510361 LRRC9Q6ZRR7 1453 aa26.61■■□□□ 1.85
SDHA-213ENST00000510361 CFAP43Q8NDM7 1665 aa26.6■■□□□ 1.85
SDHA-213ENST00000510361 ABCC2Q92887 1545 aa26.6■■□□□ 1.85
SDHA-213ENST00000510361 PLB1Q6P1J6 1458 aa26.6■■□□□ 1.85
SDHA-213ENST00000510361 CCNB3Q8WWL7 1395 aa26.59■■□□□ 1.85
SDHA-213ENST00000510361 ABCA8O94911 1581 aa26.57■■□□□ 1.84
SDHA-213ENST00000510361 NPM1P06748 294 aaKnown RBP eCLIP26.56■■□□□ 1.84
SDHA-213ENST00000510361 FYCO1Q9BQS8 1478 aa26.53■■□□□ 1.84
SDHA-213ENST00000510361 CASKIN1Q8WXD9 1431 aa26.52■■□□□ 1.84
SDHA-213ENST00000510361 RAPGEF6Q8TEU7 1601 aa26.49■■□□□ 1.83
SDHA-213ENST00000510361 DHX57Q6P158 1386 aaKnown RBP26.48■■□□□ 1.83
SDHA-213ENST00000510361 KDM5BQ9UGL1 1544 aa26.48■■□□□ 1.83
SDHA-213ENST00000510361 PHLDB1Q86UU1 1377 aa26.47■■□□□ 1.83
SDHA-213ENST00000510361 FMN1Q68DA7 1419 aa26.46■■□□□ 1.83
SDHA-213ENST00000510361 MAPKBP1O60336 1514 aa26.45■■□□□ 1.82
SDHA-213ENST00000510361 ZCCHC11Q5TAX3 1644 aaKnown RBP26.45■■□□□ 1.82
SDHA-213ENST00000510361 CLSPNQ9HAW4 1339 aa26.41■■□□□ 1.82
SDHA-213ENST00000510361 NUP153P49790 1475 aaKnown RBP26.39■■□□□ 1.81
SDHA-213ENST00000510361 TRHP20396 242 aaPredicted RBP26.38■■□□□ 1.81
SDHA-213ENST00000510361 ARID3CA6NKF2 412 aa26.36■■□□□ 1.81
SDHA-213ENST00000510361 DIEXFQ68CQ4 756 aaKnown RBP26.36■■□□□ 1.81
SDHA-213ENST00000510361 ATP1B4Q9UN42 357 aaPredicted RBP26.36■■□□□ 1.81
SDHA-213ENST00000510361 ASXL2Q76L83 1435 aa26.36■■□□□ 1.81
SDHA-213ENST00000510361 ATP10BO94823 1461 aa26.36■■□□□ 1.81
SDHA-213ENST00000510361 LRRIQ1Q96JM4 1722 aa26.36■■□□□ 1.81
SDHA-213ENST00000510361 ZNF316A6NFI3 1004 aaPredicted RBP26.35■■□□□ 1.81
SDHA-213ENST00000510361 ITGAEP38570 1179 aa26.32■■□□□ 1.8
SDHA-213ENST00000510361 HECW1Q76N89 1606 aa26.32■■□□□ 1.8
SDHA-213ENST00000510361 ABCC10Q5T3U5 1492 aa26.3■■□□□ 1.8
SDHA-213ENST00000510361 KIF13AQ9H1H9 1805 aa26.28■■□□□ 1.8
SDHA-213ENST00000510361 DIP2BQ9P265 1576 aa26.28■■□□□ 1.8
SDHA-213ENST00000510361 WDR7Q9Y4E6 1490 aa26.26■■□□□ 1.79
SDHA-213ENST00000510361 RAB3GAP2Q9H2M9 1393 aa26.26■■□□□ 1.79
SDHA-213ENST00000510361 EPRSP07814 1512 aaKnown RBP26.24■■□□□ 1.79
SDHA-213ENST00000510361 CDK13Q14004 1512 aaKnown RBP26.24■■□□□ 1.79
SDHA-213ENST00000510361 FAM69CQ0P6D2 419 aa26.23■■□□□ 1.79
SDHA-213ENST00000510361 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.23■■□□□ 1.79
SDHA-213ENST00000510361 SETD5Q9C0A6 1442 aa26.2■■□□□ 1.79
SDHA-213ENST00000510361 FAM50AQ14320 339 aaKnown RBP26.2■■□□□ 1.79
SDHA-213ENST00000510361 GLI2P10070 1586 aa26.17■■□□□ 1.78
SDHA-213ENST00000510361 FGD6Q6ZV73 1430 aa26.16■■□□□ 1.78
SDHA-213ENST00000510361 MTUS2Q5JR59 1369 aa26.16■■□□□ 1.78
SDHA-213ENST00000510361 CCDC18Q5T9S5 1454 aa26.16■■□□□ 1.78
SDHA-213ENST00000510361 KCNH8Q96L42 1107 aa26.15■■□□□ 1.78
SDHA-213ENST00000510361 PLEKHD1A6NEE1 506 aa26.15■■□□□ 1.78
SDHA-213ENST00000510361 MAGI3Q5TCQ9 1506 aa26.12■■□□□ 1.77
SDHA-213ENST00000510361 NCOA2Q15596 1464 aa26.11■■□□□ 1.77
SDHA-213ENST00000510361 EHBP1L1Q8N3D4 1523 aa26.1■■□□□ 1.77
SDHA-213ENST00000510361 CDK11AQ9UQ88 783 aaPredicted RBP26.09■■□□□ 1.77
SDHA-213ENST00000510361 SUPT6HQ7KZ85 1726 aaKnown RBP26.09■■□□□ 1.77
SDHA-213ENST00000510361 MAP3K4Q9Y6R4 1608 aa26.08■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms