RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 JPH4Q96JJ6 628 aa36.15■■■■□ 3.38
UBE2D3-229ENST00000510129 PRG4Q92954 1404 aaPredicted RBP36.1■■■■□ 3.37
UBE2D3-229ENST00000510129 ERCC6L2Q5T890 1561 aa36.09■■■■□ 3.37
UBE2D3-229ENST00000510129 RAPGEF2Q9Y4G8 1499 aa36.05■■■■□ 3.36
UBE2D3-229ENST00000510129 IQGAP2Q13576 1575 aa35.9■■■■□ 3.34
UBE2D3-229ENST00000510129 EEA1Q15075 1411 aa35.84■■■■□ 3.33
UBE2D3-229ENST00000510129 CARMIL2Q6F5E8 1435 aa35.83■■■■□ 3.33
UBE2D3-229ENST00000510129 PRXQ9BXM0 1461 aa35.82■■■■□ 3.32
UBE2D3-229ENST00000510129 TRHP20396 242 aaPredicted RBP35.81■■■■□ 3.32
UBE2D3-229ENST00000510129 CSRNP3Q8WYN3 585 aa35.74■■■■□ 3.31
UBE2D3-229ENST00000510129 CTTNBP2Q8WZ74 1663 aa35.71■■■■□ 3.31
UBE2D3-229ENST00000510129 UGGT2Q9NYU1 1516 aa35.7■■■■□ 3.31
UBE2D3-229ENST00000510129 TNIKQ9UKE5 1360 aa35.68■■■■□ 3.3
UBE2D3-229ENST00000510129 PTPRGP23470 1445 aa35.66■■■■□ 3.3
UBE2D3-229ENST00000510129 NPM1P06748 294 aaKnown RBP eCLIP35.63■■■■□ 3.29
UBE2D3-229ENST00000510129 CHIC1Q5VXU3 224 aa35.63■■■■□ 3.29
UBE2D3-229ENST00000510129 DISP1Q96F81 1524 aa35.61■■■■□ 3.29
UBE2D3-229ENST00000510129 GOLGA3Q08378 1498 aa35.56■■■■□ 3.28
UBE2D3-229ENST00000510129 ADCY10Q96PN6 1610 aa35.56■■■■□ 3.28
UBE2D3-229ENST00000510129 KIAA0556O60303 1618 aa35.54■■■■□ 3.28
UBE2D3-229ENST00000510129 MAPKBP1O60336 1514 aa35.47■■■■□ 3.27
UBE2D3-229ENST00000510129 UHRF1BP1LA0JNW5 1464 aa35.44■■■■□ 3.26
UBE2D3-229ENST00000510129 TTBK1Q5TCY1 1321 aaPredicted RBP35.44■■■■□ 3.26
UBE2D3-229ENST00000510129 UACAQ9BZF9 1416 aa35.42■■■■□ 3.26
UBE2D3-229ENST00000510129 FAM9AQ8IZU1 332 aaPredicted RBP35.41■■■■□ 3.26
UBE2D3-229ENST00000510129 KIF21BO75037 1637 aa35.41■■■■□ 3.26
UBE2D3-229ENST00000510129 ABCC2Q92887 1545 aa35.39■■■■□ 3.26
UBE2D3-229ENST00000510129 ABCC10Q5T3U5 1492 aa35.32■■■■□ 3.24
UBE2D3-229ENST00000510129 KIF13AQ9H1H9 1805 aa35.29■■■■□ 3.24
UBE2D3-229ENST00000510129 KDM5BQ9UGL1 1544 aa35.24■■■■□ 3.23
UBE2D3-229ENST00000510129 SAMD9Q5K651 1589 aa35.22■■■■□ 3.23
UBE2D3-229ENST00000510129 DIP2BQ9P265 1576 aa35.22■■■■□ 3.23
UBE2D3-229ENST00000510129 FAM69CQ0P6D2 419 aa35.22■■■■□ 3.23
UBE2D3-229ENST00000510129 PLB1Q6P1J6 1458 aa35.22■■■■□ 3.23
UBE2D3-229ENST00000510129 ABCA8O94911 1581 aa35.16■■■■□ 3.22
UBE2D3-229ENST00000510129 ASXL2Q76L83 1435 aa35.15■■■■□ 3.22
UBE2D3-229ENST00000510129 ZCCHC11Q5TAX3 1644 aaKnown RBP35.13■■■■□ 3.21
UBE2D3-229ENST00000510129 EFCAB5A4FU69 1503 aa35.1■■■■□ 3.21
UBE2D3-229ENST00000510129 P3H3Q8IVL6 736 aa35.09■■■■□ 3.21
UBE2D3-229ENST00000510129 UBTFP17480 764 aaKnown RBP35.08■■■■□ 3.21
UBE2D3-229ENST00000510129 GLI2P10070 1586 aa35.04■■■■□ 3.2
UBE2D3-229ENST00000510129 RANGAP1P46060 587 aaPredicted RBP34.99■■■■□ 3.19
UBE2D3-229ENST00000510129 WDR7Q9Y4E6 1490 aa34.97■■■■□ 3.19
UBE2D3-229ENST00000510129 EPRSP07814 1512 aaKnown RBP34.96■■■■□ 3.19
UBE2D3-229ENST00000510129 RAPGEF6Q8TEU7 1601 aa34.95■■■■□ 3.18
UBE2D3-229ENST00000510129 FHOD3Q2V2M9 1422 aa34.93■■■■□ 3.18
UBE2D3-229ENST00000510129 EHMT2Q96KQ7 1210 aa34.9■■■■□ 3.18
UBE2D3-229ENST00000510129 TSPOAP1O95153 1857 aa34.87■■■■□ 3.17
UBE2D3-229ENST00000510129 ATP10BO94823 1461 aa34.85■■■■□ 3.17
UBE2D3-229ENST00000510129 MAP3K4Q9Y6R4 1608 aa34.83■■■■□ 3.17
UBE2D3-229ENST00000510129 TEX14Q8IWB6 1497 aa34.79■■■■□ 3.16
UBE2D3-229ENST00000510129 NUP153P49790 1475 aaKnown RBP34.78■■■■□ 3.16
UBE2D3-229ENST00000510129 FMN1Q68DA7 1419 aa34.78■■■■□ 3.16
UBE2D3-229ENST00000510129 KDM6BO15054 1643 aa34.75■■■■□ 3.15
UBE2D3-229ENST00000510129 ARHGAP35Q9NRY4 1499 aa34.75■■■■□ 3.15
UBE2D3-229ENST00000510129 PPRC1Q5VV67 1664 aaKnown RBP34.73■■■■□ 3.15
UBE2D3-229ENST00000510129 CFAP43Q8NDM7 1665 aa34.73■■■■□ 3.15
UBE2D3-229ENST00000510129 KCNH8Q96L42 1107 aa34.73■■■■□ 3.15
UBE2D3-229ENST00000510129 ARID3CA6NKF2 412 aa34.72■■■■□ 3.15
UBE2D3-229ENST00000510129 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.72■■■■□ 3.15
UBE2D3-229ENST00000510129 HNRNPUL2Q1KMD3 747 aaKnown RBP34.72■■■■□ 3.15
UBE2D3-229ENST00000510129 CD109Q6YHK3 1445 aa34.67■■■■□ 3.14
UBE2D3-229ENST00000510129 MAGI3Q5TCQ9 1506 aa34.65■■■■□ 3.14
UBE2D3-229ENST00000510129 PLEKHD1A6NEE1 506 aa34.62■■■■□ 3.13
UBE2D3-229ENST00000510129 HECW1Q76N89 1606 aa34.61■■■■□ 3.13
UBE2D3-229ENST00000510129 ABCA9Q8IUA7 1624 aa34.58■■■■□ 3.13
UBE2D3-229ENST00000510129 CLIP1P30622 1438 aa34.51■■■■□ 3.12
UBE2D3-229ENST00000510129 CDK11AQ9UQ88 783 aaPredicted RBP34.49■■■■□ 3.11
UBE2D3-229ENST00000510129 ATP1B4Q9UN42 357 aaPredicted RBP34.48■■■■□ 3.11
UBE2D3-229ENST00000510129 PHLDB1Q86UU1 1377 aa34.48■■■■□ 3.11
UBE2D3-229ENST00000510129 CDK13Q14004 1512 aaKnown RBP34.45■■■■□ 3.11
UBE2D3-229ENST00000510129 CASKIN1Q8WXD9 1431 aa34.42■■■■□ 3.1
UBE2D3-229ENST00000510129 COL17A1Q9UMD9 1497 aaPredicted RBP34.4■■■■□ 3.1
UBE2D3-229ENST00000510129 NEO1Q92859 1461 aa34.38■■■■□ 3.09
UBE2D3-229ENST00000510129 CCDC18Q5T9S5 1454 aa34.37■■■■□ 3.09
UBE2D3-229ENST00000510129 ARAP3Q8WWN8 1544 aa34.36■■■■□ 3.09
UBE2D3-229ENST00000510129 FYCO1Q9BQS8 1478 aa34.35■■■■□ 3.09
UBE2D3-229ENST00000510129 PCF11O94913 1555 aaKnown RBP34.34■■■■□ 3.09
UBE2D3-229ENST00000510129 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.34■■■■□ 3.096e-33■□□□□ 10.7
UBE2D3-229ENST00000510129 CFAP74Q9C0B2 1584 aa34.28■■■■□ 3.08
UBE2D3-229ENST00000510129 TROQ12816 1431 aaPredicted RBP34.28■■■■□ 3.08
UBE2D3-229ENST00000510129 CEP162Q5TB80 1403 aa34.27■■■■□ 3.08
UBE2D3-229ENST00000510129 LRRIQ1Q96JM4 1722 aa34.26■■■■□ 3.07
UBE2D3-229ENST00000510129 TTC37Q6PGP7 1564 aa34.25■■■■□ 3.07
UBE2D3-229ENST00000510129 AEBP2Q6ZN18 517 aaPredicted RBP34.25■■■■□ 3.07
UBE2D3-229ENST00000510129 KIF14Q15058 1648 aa34.25■■■■□ 3.07
UBE2D3-229ENST00000510129 FANCAO15360 1455 aa34.21■■■■□ 3.07
UBE2D3-229ENST00000510129 PLCH2O75038 1416 aa34.18■■■■□ 3.06
UBE2D3-229ENST00000510129 AKNAQ7Z591 1439 aa34.15■■■■□ 3.06
UBE2D3-229ENST00000510129 MYO5CQ9NQX4 1742 aa34.14■■■■□ 3.06
UBE2D3-229ENST00000510129 DENND4BO75064 1496 aaPredicted RBP34.09■■■■□ 3.05
UBE2D3-229ENST00000510129 LOC105371045A0A1W2PR82 267 aa34.09■■■■□ 3.05
UBE2D3-229ENST00000510129 EFCAB2Q5VUJ9 269 aa34.08■■■■□ 3.05
UBE2D3-229ENST00000510129 RAPGEF3O95398 923 aa34.05■■■■□ 3.04
UBE2D3-229ENST00000510129 ADGRL1O94910 1474 aa34.01■■■■□ 3.04
UBE2D3-229ENST00000510129 FRMPD1Q5SYB0 1578 aa34.01■■■■□ 3.03
UBE2D3-229ENST00000510129 ARHGAP5Q13017 1502 aa33.99■■■■□ 3.03
UBE2D3-229ENST00000510129 RICTORQ6R327 1708 aa33.99■■■■□ 3.03
UBE2D3-229ENST00000510129 KDM4FA0A1W2PPD8 638 aa33.98■■■■□ 3.03
UBE2D3-229ENST00000510129 MTUS2Q5JR59 1369 aa33.95■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms