RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 RUSC2Q8N2Y8 1516 aa17.58■□□□□ 0.41
SCARB2-204ENST00000509994 PRG4Q92954 1404 aaPredicted RBP17.58■□□□□ 0.41
SCARB2-204ENST00000509994 JPH4Q96JJ6 628 aa17.54■□□□□ 0.4
SCARB2-204ENST00000509994 IGF1RP08069 1367 aa17.49■□□□□ 0.39
SCARB2-204ENST00000509994 KIAA0586Q9BVV6 1533 aa17.45■□□□□ 0.38
SCARB2-204ENST00000509994 CARMIL1Q5VZK9 1371 aa17.43■□□□□ 0.38
SCARB2-204ENST00000509994 NPM1P06748 294 aaKnown RBP eCLIP17.43■□□□□ 0.38
SCARB2-204ENST00000509994 TTBK1Q5TCY1 1321 aaPredicted RBP17.43■□□□□ 0.38
SCARB2-204ENST00000509994 KIF13AQ9H1H9 1805 aa17.41■□□□□ 0.38
SCARB2-204ENST00000509994 ADCY10Q96PN6 1610 aa17.38■□□□□ 0.37
SCARB2-204ENST00000509994 IQGAP2Q13576 1575 aa17.37■□□□□ 0.37
SCARB2-204ENST00000509994 CARMIL2Q6F5E8 1435 aa17.34■□□□□ 0.37
SCARB2-204ENST00000509994 PTPRGP23470 1445 aa17.31■□□□□ 0.36
SCARB2-204ENST00000509994 FAM69CQ0P6D2 419 aa17.31■□□□□ 0.36
SCARB2-204ENST00000509994 MAPKBP1O60336 1514 aa17.31■□□□□ 0.36
SCARB2-204ENST00000509994 RAPGEF2Q9Y4G8 1499 aa17.31■□□□□ 0.36
SCARB2-204ENST00000509994 TSPOAP1O95153 1857 aa17.29■□□□□ 0.36
SCARB2-204ENST00000509994 DIP2BQ9P265 1576 aa17.28■□□□□ 0.36
SCARB2-204ENST00000509994 TNIKQ9UKE5 1360 aa17.28■□□□□ 0.36
SCARB2-204ENST00000509994 ABCC10Q5T3U5 1492 aa17.27■□□□□ 0.36
SCARB2-204ENST00000509994 CTTNBP2Q8WZ74 1663 aa17.26■□□□□ 0.35
SCARB2-204ENST00000509994 KIAA0556O60303 1618 aa17.2■□□□□ 0.34
SCARB2-204ENST00000509994 ABCC2Q92887 1545 aa17.2■□□□□ 0.34
SCARB2-204ENST00000509994 DISP1Q96F81 1524 aa17.2■□□□□ 0.34
SCARB2-204ENST00000509994 UGGT2Q9NYU1 1516 aa17.19■□□□□ 0.34
SCARB2-204ENST00000509994 UACAQ9BZF9 1416 aa17.17■□□□□ 0.34
SCARB2-204ENST00000509994 KDM6BO15054 1643 aa17.16■□□□□ 0.34
SCARB2-204ENST00000509994 ASXL2Q76L83 1435 aa17.14■□□□□ 0.33
SCARB2-204ENST00000509994 UHRF1BP1LA0JNW5 1464 aa17.13■□□□□ 0.33
SCARB2-204ENST00000509994 PLB1Q6P1J6 1458 aa17.12■□□□□ 0.33
SCARB2-204ENST00000509994 ZCCHC11Q5TAX3 1644 aaKnown RBP17.12■□□□□ 0.33
SCARB2-204ENST00000509994 GOLGA3Q08378 1498 aa17.12■□□□□ 0.33
SCARB2-204ENST00000509994 PRXQ9BXM0 1461 aa17.08■□□□□ 0.32
SCARB2-204ENST00000509994 KDM5BQ9UGL1 1544 aa17.06■□□□□ 0.32
SCARB2-204ENST00000509994 FAM9AQ8IZU1 332 aaPredicted RBP17.06■□□□□ 0.32
SCARB2-204ENST00000509994 GLI2P10070 1586 aa17.05■□□□□ 0.32
SCARB2-204ENST00000509994 PPRC1Q5VV67 1664 aaKnown RBP17.04■□□□□ 0.32
SCARB2-204ENST00000509994 EPRSP07814 1512 aaKnown RBP17.02■□□□□ 0.32
SCARB2-204ENST00000509994 MAP3K4Q9Y6R4 1608 aa17.01■□□□□ 0.31
SCARB2-204ENST00000509994 P3H3Q8IVL6 736 aa17.01■□□□□ 0.31
SCARB2-204ENST00000509994 CSRNP3Q8WYN3 585 aa17.01■□□□□ 0.31
SCARB2-204ENST00000509994 WDR7Q9Y4E6 1490 aa16.99■□□□□ 0.31
SCARB2-204ENST00000509994 RANGAP1P46060 587 aaPredicted RBP16.99■□□□□ 0.31
SCARB2-204ENST00000509994 ABCA8O94911 1581 aa16.98■□□□□ 0.31
SCARB2-204ENST00000509994 ARID3CA6NKF2 412 aa16.98■□□□□ 0.31
SCARB2-204ENST00000509994 TEX14Q8IWB6 1497 aa16.98■□□□□ 0.31
SCARB2-204ENST00000509994 EEA1Q15075 1411 aa16.96■□□□□ 0.31
SCARB2-204ENST00000509994 KCNH8Q96L42 1107 aa16.96■□□□□ 0.31
SCARB2-204ENST00000509994 CFAP43Q8NDM7 1665 aa16.93■□□□□ 0.3
SCARB2-204ENST00000509994 SAMD9Q5K651 1589 aa16.91■□□□□ 0.3
SCARB2-204ENST00000509994 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.9■□□□□ 0.3
SCARB2-204ENST00000509994 HNRNPUL2Q1KMD3 747 aaKnown RBP16.9■□□□□ 0.3
SCARB2-204ENST00000509994 RAPGEF6Q8TEU7 1601 aa16.89■□□□□ 0.29
SCARB2-204ENST00000509994 CD109Q6YHK3 1445 aa16.88■□□□□ 0.29
SCARB2-204ENST00000509994 EHMT2Q96KQ7 1210 aa16.88■□□□□ 0.29
SCARB2-204ENST00000509994 KIF21BO75037 1637 aa16.85■□□□□ 0.29
SCARB2-204ENST00000509994 FHOD3Q2V2M9 1422 aa16.84■□□□□ 0.29
SCARB2-204ENST00000509994 KDM4FA0A1W2PPD8 638 aa16.83■□□□□ 0.28
SCARB2-204ENST00000509994 ATP10BO94823 1461 aa16.83■□□□□ 0.28
SCARB2-204ENST00000509994 COL17A1Q9UMD9 1497 aaPredicted RBP16.83■□□□□ 0.28
SCARB2-204ENST00000509994 MAGI3Q5TCQ9 1506 aa16.82■□□□□ 0.28
SCARB2-204ENST00000509994 ADGRL1O94910 1474 aa16.8■□□□□ 0.28
SCARB2-204ENST00000509994 UBTFP17480 764 aaKnown RBP16.79■□□□□ 0.28
SCARB2-204ENST00000509994 EFCAB5A4FU69 1503 aa16.79■□□□□ 0.28
SCARB2-204ENST00000509994 ABCA9Q8IUA7 1624 aa16.78■□□□□ 0.28
SCARB2-204ENST00000509994 NUP153P49790 1475 aaKnown RBP16.76■□□□□ 0.27
SCARB2-204ENST00000509994 ATP1B4Q9UN42 357 aaPredicted RBP16.72■□□□□ 0.27
SCARB2-204ENST00000509994 PLEKHD1A6NEE1 506 aa16.7■□□□□ 0.26
SCARB2-204ENST00000509994 ARAP3Q8WWN8 1544 aa16.68■□□□□ 0.26
SCARB2-204ENST00000509994 CDK13Q14004 1512 aaKnown RBP16.66■□□□□ 0.26
SCARB2-204ENST00000509994 HECW1Q76N89 1606 aa16.66■□□□□ 0.26
SCARB2-204ENST00000509994 NEO1Q92859 1461 aa16.66■□□□□ 0.26
SCARB2-204ENST00000509994 PHLDB1Q86UU1 1377 aa16.65■□□□□ 0.26
SCARB2-204ENST00000509994 CFAP74Q9C0B2 1584 aa16.65■□□□□ 0.26
SCARB2-204ENST00000509994 FMN1Q68DA7 1419 aa16.63■□□□□ 0.25
SCARB2-204ENST00000509994 RAPGEF3O95398 923 aa16.63■□□□□ 0.25
SCARB2-204ENST00000509994 TTC37Q6PGP7 1564 aa16.63■□□□□ 0.25
SCARB2-204ENST00000509994 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.61■□□□□ 0.25
SCARB2-204ENST00000509994 FANCAO15360 1455 aa16.61■□□□□ 0.25
SCARB2-204ENST00000509994 ARHGAP35Q9NRY4 1499 aa16.61■□□□□ 0.25
SCARB2-204ENST00000509994 ARID4BQ4LE39 1312 aaPredicted RBP16.6■□□□□ 0.25
SCARB2-204ENST00000509994 FRMPD1Q5SYB0 1578 aa16.59■□□□□ 0.25
SCARB2-204ENST00000509994 MYO5CQ9NQX4 1742 aa16.57■□□□□ 0.24
SCARB2-204ENST00000509994 HECW2Q9P2P5 1572 aa16.57■□□□□ 0.24
SCARB2-204ENST00000509994 DENND4BO75064 1496 aaPredicted RBP16.57■□□□□ 0.24
SCARB2-204ENST00000509994 AKNAQ7Z591 1439 aa16.57■□□□□ 0.24
SCARB2-204ENST00000509994 RICTORQ6R327 1708 aa16.56■□□□□ 0.24
SCARB2-204ENST00000509994 CDK11AQ9UQ88 783 aaPredicted RBP16.56■□□□□ 0.24
SCARB2-204ENST00000509994 KIF14Q15058 1648 aa16.55■□□□□ 0.24
SCARB2-204ENST00000509994 ARHGEF40Q8TER5 1519 aa16.55■□□□□ 0.24
SCARB2-204ENST00000509994 CLIP1P30622 1438 aa16.53■□□□□ 0.24
SCARB2-204ENST00000509994 LRRIQ1Q96JM4 1722 aa16.52■□□□□ 0.24
SCARB2-204ENST00000509994 BCORL1Q5H9F3 1711 aa16.51■□□□□ 0.23
SCARB2-204ENST00000509994 ADAMTSL3P82987 1691 aa16.5■□□□□ 0.23
SCARB2-204ENST00000509994 PCF11O94913 1555 aaKnown RBP16.5■□□□□ 0.23
SCARB2-204ENST00000509994 ZFYVE16Q7Z3T8 1539 aa16.5■□□□□ 0.23
SCARB2-204ENST00000509994 MADDQ8WXG6 1647 aa16.48■□□□□ 0.23
SCARB2-204ENST00000509994 ARHGAP5Q13017 1502 aa16.48■□□□□ 0.23
SCARB2-204ENST00000509994 RIMS1Q86UR5 1692 aaKnown RBP16.47■□□□□ 0.23
SCARB2-204ENST00000509994 PLCH2O75038 1416 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms