RNA–Protein interactions for RNA: ENST00000509803.1

LDB2-212, Transcript of LIM domain binding 2, humanhuman

TSL 2

Gene LDB2, Length 2,718 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-212ENST00000509803 ADAMTS12P58397 1594 aa13.93□□□□□ -0.18
LDB2-212ENST00000509803 MAGI1Q96QZ7 1491 aaPredicted RBP13.92□□□□□ -0.18
LDB2-212ENST00000509803 CLIP1P30622 1438 aa13.92□□□□□ -0.18
LDB2-212ENST00000509803 SYNJ2O15056 1496 aa13.92□□□□□ -0.18
LDB2-212ENST00000509803 GRIN2AQ12879 1464 aa13.91□□□□□ -0.18
LDB2-212ENST00000509803 ARID3CA6NKF2 412 aa13.9□□□□□ -0.18
LDB2-212ENST00000509803 JPH4Q96JJ6 628 aa13.85□□□□□ -0.19
LDB2-212ENST00000509803 CHD1O14646 1710 aa13.85□□□□□ -0.19
LDB2-212ENST00000509803 FHOD3Q2V2M9 1422 aa13.83□□□□□ -0.2
LDB2-212ENST00000509803 CEP170Q5SW79 1584 aa13.83□□□□□ -0.2
LDB2-212ENST00000509803 OSCARQ8IYS5 282 aa13.82□□□□□ -0.2
LDB2-212ENST00000509803 ARHGAP35Q9NRY4 1499 aa13.8□□□□□ -0.2
LDB2-212ENST00000509803 CTTNBP2Q8WZ74 1663 aa13.79□□□□□ -0.2
LDB2-212ENST00000509803 ARAP1Q96P48 1450 aa13.79□□□□□ -0.2
LDB2-212ENST00000509803 IQGAP2Q13576 1575 aa13.78□□□□□ -0.2
LDB2-212ENST00000509803 KIAA0586Q9BVV6 1533 aa13.77□□□□□ -0.2
LDB2-212ENST00000509803 APLP2Q06481 763 aa13.77□□□□□ -0.21
LDB2-212ENST00000509803 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.76□□□□□ -0.21
LDB2-212ENST00000509803 HNRNPUL2Q1KMD3 747 aaKnown RBP13.76□□□□□ -0.21
LDB2-212ENST00000509803 NUP160Q12769 1436 aa13.75□□□□□ -0.21
LDB2-212ENST00000509803 PRG4Q92954 1404 aaPredicted RBP13.74□□□□□ -0.21
LDB2-212ENST00000509803 VPS8Q8N3P4 1428 aa13.69□□□□□ -0.22
LDB2-212ENST00000509803 ERCC6L2Q5T890 1561 aa13.68□□□□□ -0.22
LDB2-212ENST00000509803 CARMIL2Q6F5E8 1435 aa13.67□□□□□ -0.22
LDB2-212ENST00000509803 DISP1Q96F81 1524 aa13.67□□□□□ -0.22
LDB2-212ENST00000509803 KANK4Q5T7N3 995 aaPredicted RBP13.66□□□□□ -0.22
LDB2-212ENST00000509803 UGGT2Q9NYU1 1516 aa13.64□□□□□ -0.23
LDB2-212ENST00000509803 PTPRGP23470 1445 aa13.63□□□□□ -0.23
LDB2-212ENST00000509803 CYB5RLQ6IPT4 315 aa13.63□□□□□ -0.23
LDB2-212ENST00000509803 EFCAB5A4FU69 1503 aa13.62□□□□□ -0.23
LDB2-212ENST00000509803 KIAA0556O60303 1618 aa13.62□□□□□ -0.23
LDB2-212ENST00000509803 PLB1Q6P1J6 1458 aa13.62□□□□□ -0.23
LDB2-212ENST00000509803 SAMD9Q5K651 1589 aa13.61□□□□□ -0.23
LDB2-212ENST00000509803 PCGF6Q9BYE7 350 aa13.61□□□□□ -0.23
LDB2-212ENST00000509803 FMN1Q68DA7 1419 aa13.61□□□□□ -0.23
LDB2-212ENST00000509803 CLASP1Q7Z460 1538 aa13.6□□□□□ -0.23
LDB2-212ENST00000509803 PCF11O94913 1555 aaKnown RBP13.59□□□□□ -0.23
LDB2-212ENST00000509803 CDK13Q14004 1512 aaKnown RBP13.54□□□□□ -0.24
LDB2-212ENST00000509803 KCNH8Q96L42 1107 aa13.54□□□□□ -0.24
LDB2-212ENST00000509803 CASKIN1Q8WXD9 1431 aa13.53□□□□□ -0.24
LDB2-212ENST00000509803 ITGAEP38570 1179 aa13.52□□□□□ -0.24
LDB2-212ENST00000509803 MTUS2Q5JR59 1369 aa13.52□□□□□ -0.25
LDB2-212ENST00000509803 SHROOM2Q13796 1616 aa13.52□□□□□ -0.25
LDB2-212ENST00000509803 HRCP23327 699 aa13.51□□□□□ -0.25
LDB2-212ENST00000509803 FYCO1Q9BQS8 1478 aa13.5□□□□□ -0.25
LDB2-212ENST00000509803 ARHGEF11O15085 1522 aa13.49□□□□□ -0.25
LDB2-212ENST00000509803 NUP153P49790 1475 aaKnown RBP13.48□□□□□ -0.25
LDB2-212ENST00000509803 UACAQ9BZF9 1416 aa13.48□□□□□ -0.25
LDB2-212ENST00000509803 EPRSP07814 1512 aaKnown RBP13.48□□□□□ -0.25
LDB2-212ENST00000509803 RAPGEF6Q8TEU7 1601 aa13.47□□□□□ -0.25
LDB2-212ENST00000509803 PLEKHD1A6NEE1 506 aa13.47□□□□□ -0.25
LDB2-212ENST00000509803 NPM1P06748 294 aaKnown RBP eCLIP13.47□□□□□ -0.25
LDB2-212ENST00000509803 TRIM26Q12899 539 aaPredicted RBP13.47□□□□□ -0.25
LDB2-212ENST00000509803 CDK11AQ9UQ88 783 aaPredicted RBP13.46□□□□□ -0.26
LDB2-212ENST00000509803 LRRIQ1Q96JM4 1722 aa13.46□□□□□ -0.26
LDB2-212ENST00000509803 FAM50AQ14320 339 aaKnown RBP13.45□□□□□ -0.26
LDB2-212ENST00000509803 TIAM1Q13009 1591 aa13.45□□□□□ -0.26
LDB2-212ENST00000509803 HECW1Q76N89 1606 aa13.44□□□□□ -0.26
LDB2-212ENST00000509803 ZNF777Q9ULD5 760 aaPredicted RBP13.43□□□□□ -0.26
LDB2-212ENST00000509803 ATP10BO94823 1461 aa13.43□□□□□ -0.26
LDB2-212ENST00000509803 LRRC9Q6ZRR7 1453 aa13.43□□□□□ -0.26
LDB2-212ENST00000509803 RIMBP3CA6NJZ7 1639 aa13.41□□□□□ -0.26
LDB2-212ENST00000509803 RIMBP3BA6NNM3 1639 aa13.41□□□□□ -0.26
LDB2-212ENST00000509803 RIMBP3Q9UFD9 1639 aa13.41□□□□□ -0.26
LDB2-212ENST00000509803 ABCA8O94911 1581 aa13.41□□□□□ -0.26
LDB2-212ENST00000509803 MAGI3Q5TCQ9 1506 aa13.41□□□□□ -0.26
LDB2-212ENST00000509803 PHLDB1Q86UU1 1377 aa13.39□□□□□ -0.27
LDB2-212ENST00000509803 CCDC18Q5T9S5 1454 aa13.38□□□□□ -0.27
LDB2-212ENST00000509803 ABCC2Q92887 1545 aa13.37□□□□□ -0.27
LDB2-212ENST00000509803 ADCY10Q96PN6 1610 aa13.36□□□□□ -0.27
LDB2-212ENST00000509803 ZNF644Q9H582 1327 aaPredicted RBP13.35□□□□□ -0.27
LDB2-212ENST00000509803 CFAP43Q8NDM7 1665 aa13.35□□□□□ -0.27
LDB2-212ENST00000509803 NCOA2Q15596 1464 aa13.34□□□□□ -0.27
LDB2-212ENST00000509803 DNAJC5Q9H3Z4 198 aa13.32□□□□□ -0.28
LDB2-212ENST00000509803 CFDP1Q9UEE9 299 aaPredicted RBP13.32□□□□□ -0.28
LDB2-212ENST00000509803 CHIC2Q9UKJ5 165 aa13.32□□□□□ -0.28
LDB2-212ENST00000509803 CCNB3Q8WWL7 1395 aa13.32□□□□□ -0.28
LDB2-212ENST00000509803 TROQ12816 1431 aaPredicted RBP13.32□□□□□ -0.28
LDB2-212ENST00000509803 ZCCHC11Q5TAX3 1644 aaKnown RBP13.31□□□□□ -0.28
LDB2-212ENST00000509803 MAP3K1Q13233 1512 aa13.3□□□□□ -0.28
LDB2-212ENST00000509803 KIF14Q15058 1648 aa13.3□□□□□ -0.28
LDB2-212ENST00000509803 ASXL2Q76L83 1435 aa13.3□□□□□ -0.28
LDB2-212ENST00000509803 EHBP1L1Q8N3D4 1523 aa13.29□□□□□ -0.28
LDB2-212ENST00000509803 KDM5BQ9UGL1 1544 aa13.28□□□□□ -0.28
LDB2-212ENST00000509803 UHRF1BP1LA0JNW5 1464 aa13.27□□□□□ -0.28
LDB2-212ENST00000509803 SUPT6HQ7KZ85 1726 aaKnown RBP13.27□□□□□ -0.28
LDB2-212ENST00000509803 TRHP20396 242 aaPredicted RBP13.26□□□□□ -0.29
LDB2-212ENST00000509803 FAM69CQ0P6D2 419 aa13.26□□□□□ -0.29
LDB2-212ENST00000509803 HNRNPMP52272 730 aaKnown RBP eCLIP13.26□□□□□ -0.29
LDB2-212ENST00000509803 MYOM3Q5VTT5 1437 aa13.25□□□□□ -0.29
LDB2-212ENST00000509803 MYT1LQ9UL68 1186 aa13.24□□□□□ -0.29
LDB2-212ENST00000509803 FGD6Q6ZV73 1430 aa13.24□□□□□ -0.29
LDB2-212ENST00000509803 WDR7Q9Y4E6 1490 aa13.23□□□□□ -0.29
LDB2-212ENST00000509803 RRP7BPQ9NSQ0 103 aa13.22□□□□□ -0.29
LDB2-212ENST00000509803 GPATCH8Q9UKJ3 1502 aaKnown RBP13.21□□□□□ -0.3
LDB2-212ENST00000509803 TTC37Q6PGP7 1564 aa13.2□□□□□ -0.3
LDB2-212ENST00000509803 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.19□□□□□ -0.3
LDB2-212ENST00000509803 RRBP1Q9P2E9 1410 aaKnown RBP13.19□□□□□ -0.3
LDB2-212ENST00000509803 ARHGAP5Q13017 1502 aa13.18□□□□□ -0.3
LDB2-212ENST00000509803 EFCAB2Q5VUJ9 269 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms