RNA–Protein interactions for RNA: ENST00000509639.5

DDR1-265, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 615 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-265	ENST00000509639	EEA1	Q15075	1411 aa		33.3	■■■□□ 2.92
DDR1-265	ENST00000509639	KIAA0586	Q9BVV6	1533 aa		33.29	■■■□□ 2.92
DDR1-265	ENST00000509639	CYB5RL	Q6IPT4	315 aa		33.23	■■■□□ 2.91
DDR1-265	ENST00000509639	PRX	Q9BXM0	1461 aa		33.22	■■■□□ 2.91
DDR1-265	ENST00000509639	JPH4	Q96JJ6	628 aa		33.21	■■■□□ 2.91
DDR1-265	ENST00000509639	ERCC6L2	Q5T890	1561 aa		33.19	■■■□□ 2.9
DDR1-265	ENST00000509639	PRG4	Q92954	1404 aa	Predicted RBP	33.19	■■■□□ 2.9
DDR1-265	ENST00000509639	CSRNP3	Q8WYN3	585 aa		33.18	■■■□□ 2.9
DDR1-265	ENST00000509639	IQGAP2	Q13576	1575 aa		33.14	■■■□□ 2.9
DDR1-265	ENST00000509639	FAM9A	Q8IZU1	332 aa	Predicted RBP	33.07	■■■□□ 2.88
DDR1-265	ENST00000509639	CTTNBP2	Q8WZ74	1663 aa		33.06	■■■□□ 2.88
DDR1-265	ENST00000509639	CARMIL2	Q6F5E8	1435 aa		32.97	■■■□□ 2.87
DDR1-265	ENST00000509639	KIF21B	O75037	1637 aa		32.95	■■■□□ 2.86
DDR1-265	ENST00000509639	UGGT2	Q9NYU1	1516 aa		32.94	■■■□□ 2.86
DDR1-265	ENST00000509639	DISP1	Q96F81	1524 aa		32.86	■■■□□ 2.85
DDR1-265	ENST00000509639	TNIK	Q9UKE5	1360 aa		32.83	■■■□□ 2.85
DDR1-265	ENST00000509639	KIAA0556	O60303	1618 aa		32.83	■■■□□ 2.85
DDR1-265	ENST00000509639	GOLGA3	Q08378	1498 aa		32.8	■■■□□ 2.84
DDR1-265	ENST00000509639	PTPRG	P23470	1445 aa		32.79	■■■□□ 2.84
DDR1-265	ENST00000509639	TTBK1	Q5TCY1	1321 aa	Predicted RBP	32.72	■■■□□ 2.83
DDR1-265	ENST00000509639	ADCY10	Q96PN6	1610 aa		32.68	■■■□□ 2.82
DDR1-265	ENST00000509639	EHMT2	Q96KQ7	1210 aa		32.63	■■■□□ 2.81
DDR1-265	ENST00000509639	UBTF	P17480	764 aa	Known RBP	32.62	■■■□□ 2.81
DDR1-265	ENST00000509639	SAMD9	Q5K651	1589 aa		32.62	■■■□□ 2.81
DDR1-265	ENST00000509639	NPM1	P06748	294 aa	Known RBP eCLIP	32.59	■■■□□ 2.81
DDR1-265	ENST00000509639	UACA	Q9BZF9	1416 aa		32.59	■■■□□ 2.81
DDR1-265	ENST00000509639	TRH	P20396	242 aa	Predicted RBP	32.58	■■■□□ 2.81
DDR1-265	ENST00000509639	UHRF1BP1L	A0JNW5	1464 aa		32.56	■■■□□ 2.8
DDR1-265	ENST00000509639	ABCC2	Q92887	1545 aa		32.55	■■■□□ 2.8
DDR1-265	ENST00000509639	RANGAP1	P46060	587 aa	Predicted RBP	32.53	■■■□□ 2.8
DDR1-265	ENST00000509639	EFCAB5	A4FU69	1503 aa		32.51	■■■□□ 2.8
DDR1-265	ENST00000509639	P3H3	Q8IVL6	736 aa		32.5	■■■□□ 2.79
DDR1-265	ENST00000509639	MAPKBP1	O60336	1514 aa		32.49	■■■□□ 2.79
DDR1-265	ENST00000509639	PLB1	Q6P1J6	1458 aa		32.45	■■■□□ 2.79
DDR1-265	ENST00000509639	ABCA8	O94911	1581 aa		32.44	■■■□□ 2.78
DDR1-265	ENST00000509639	FHOD3	Q2V2M9	1422 aa		32.41	■■■□□ 2.78
DDR1-265	ENST00000509639	KDM5B	Q9UGL1	1544 aa		32.4	■■■□□ 2.78
DDR1-265	ENST00000509639	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.35	■■■□□ 2.77
DDR1-265	ENST00000509639	ABCC10	Q5T3U5	1492 aa		32.31	■■■□□ 2.76
DDR1-265	ENST00000509639	RAPGEF6	Q8TEU7	1601 aa		32.3	■■■□□ 2.76
DDR1-265	ENST00000509639	ARHGAP35	Q9NRY4	1499 aa		32.29	■■■□□ 2.76
DDR1-265	ENST00000509639	KIF13A	Q9H1H9	1805 aa		32.28	■■■□□ 2.76
DDR1-265	ENST00000509639	ASXL2	Q76L83	1435 aa		32.28	■■■□□ 2.76
DDR1-265	ENST00000509639	DIP2B	Q9P265	1576 aa		32.28	■■■□□ 2.76
DDR1-265	ENST00000509639	FAM69C	Q0P6D2	419 aa		32.21	■■■□□ 2.75
DDR1-265	ENST00000509639	FMN1	Q68DA7	1419 aa		32.19	■■■□□ 2.74
DDR1-265	ENST00000509639	NUP153	P49790	1475 aa	Known RBP	32.16	■■■□□ 2.74
DDR1-265	ENST00000509639	WDR7	Q9Y4E6	1490 aa		32.16	■■■□□ 2.74
DDR1-265	ENST00000509639	CLIP1	P30622	1438 aa		32.15	■■■□□ 2.74
DDR1-265	ENST00000509639	ATP10B	O94823	1461 aa		32.14	■■■□□ 2.74
DDR1-265	ENST00000509639	ARID3C	A6NKF2	412 aa		32.13	■■■□□ 2.73
DDR1-265	ENST00000509639	GLI2	P10070	1586 aa		32.11	■■■□□ 2.73
DDR1-265	ENST00000509639	EPRS	P07814	1512 aa	Known RBP	32.1	■■■□□ 2.73
DDR1-265	ENST00000509639	HECW1	Q76N89	1606 aa		32.07	■■■□□ 2.72
DDR1-265	ENST00000509639	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.05	■■■□□ 2.72
DDR1-265	ENST00000509639	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.05	■■■□□ 2.72
DDR1-265	ENST00000509639	CEP162	Q5TB80	1403 aa		32.01	■■■□□ 2.72
DDR1-265	ENST00000509639	LOC105371045	A0A1W2PR82	267 aa		31.99	■■■□□ 2.71
DDR1-265	ENST00000509639	TSPOAP1	O95153	1857 aa		31.97	■■■□□ 2.71
DDR1-265	ENST00000509639	ATP1B4	Q9UN42	357 aa	Predicted RBP	31.97	■■■□□ 2.71
DDR1-265	ENST00000509639	MAP3K4	Q9Y6R4	1608 aa		31.97	■■■□□ 2.71
DDR1-265	ENST00000509639	KCNH8	Q96L42	1107 aa		31.95	■■■□□ 2.71
DDR1-265	ENST00000509639	PCF11	O94913	1555 aa	Known RBP	31.94	■■■□□ 2.7
DDR1-265	ENST00000509639	CDK13	Q14004	1512 aa	Known RBP	31.94	■■■□□ 2.7
DDR1-265	ENST00000509639	CASKIN1	Q8WXD9	1431 aa		31.92	■■■□□ 2.7
DDR1-265	ENST00000509639	CFAP43	Q8NDM7	1665 aa		31.9	■■■□□ 2.7
DDR1-265	ENST00000509639	PLEKHD1	A6NEE1	506 aa		31.89	■■■□□ 2.7
DDR1-265	ENST00000509639	FYCO1	Q9BQS8	1478 aa		31.88	■■■□□ 2.69
DDR1-265	ENST00000509639	PPRC1	Q5VV67	1664 aa	Known RBP	31.87	■■■□□ 2.69
DDR1-265	ENST00000509639	TEX14	Q8IWB6	1497 aa		31.85	■■■□□ 2.69
DDR1-265	ENST00000509639	CCDC18	Q5T9S5	1454 aa		31.84	■■■□□ 2.69
DDR1-265	ENST00000509639	CD109	Q6YHK3	1445 aa		31.83	■■■□□ 2.69
DDR1-265	ENST00000509639	ABCA9	Q8IUA7	1624 aa		31.82	■■■□□ 2.69
DDR1-265	ENST00000509639	LRRIQ1	Q96JM4	1722 aa		31.82	■■■□□ 2.68
DDR1-265	ENST00000509639	CDK11A	Q9UQ88	783 aa	Predicted RBP	31.8	■■■□□ 2.68
DDR1-265	ENST00000509639	MAGI3	Q5TCQ9	1506 aa		31.78	■■■□□ 2.68
DDR1-265	ENST00000509639	KDM6B	O15054	1643 aa		31.77	■■■□□ 2.68
DDR1-265	ENST00000509639	TRO	Q12816	1431 aa	Predicted RBP	31.69	■■■□□ 2.66
DDR1-265	ENST00000509639	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	31.69	■■■□□ 2.66	6e-7	■■■■□ 21.9
DDR1-265	ENST00000509639	KIF14	Q15058	1648 aa		31.67	■■■□□ 2.66
DDR1-265	ENST00000509639	TTC37	Q6PGP7	1564 aa		31.66	■■■□□ 2.66
DDR1-265	ENST00000509639	VPS8	Q8N3P4	1428 aa		31.63	■■■□□ 2.65
DDR1-265	ENST00000509639	NEO1	Q92859	1461 aa		31.57	■■■□□ 2.64
DDR1-265	ENST00000509639	PHLDB1	Q86UU1	1377 aa		31.56	■■■□□ 2.64
DDR1-265	ENST00000509639	CFAP74	Q9C0B2	1584 aa		31.55	■■■□□ 2.64
DDR1-265	ENST00000509639	COL17A1	Q9UMD9	1497 aa	Predicted RBP	31.52	■■■□□ 2.64
DDR1-265	ENST00000509639	MYO5C	Q9NQX4	1742 aa		31.52	■■■□□ 2.64
DDR1-265	ENST00000509639	FANCA	O15360	1455 aa		31.51	■■■□□ 2.63
DDR1-265	ENST00000509639	PLCH2	O75038	1416 aa		31.49	■■■□□ 2.63
DDR1-265	ENST00000509639	ARAP3	Q8WWN8	1544 aa		31.49	■■■□□ 2.63
DDR1-265	ENST00000509639	MTUS2	Q5JR59	1369 aa		31.49	■■■□□ 2.63
DDR1-265	ENST00000509639	EHBP1L1	Q8N3D4	1523 aa		31.46	■■■□□ 2.63
DDR1-265	ENST00000509639	TIAM1	Q13009	1591 aa		31.43	■■■□□ 2.62
DDR1-265	ENST00000509639	AKNA	Q7Z591	1439 aa		31.42	■■■□□ 2.62
DDR1-265	ENST00000509639	ARHGAP5	Q13017	1502 aa		31.4	■■■□□ 2.62
DDR1-265	ENST00000509639	PREX2	Q70Z35	1606 aa		31.39	■■■□□ 2.62
DDR1-265	ENST00000509639	EFCAB2	Q5VUJ9	269 aa		31.37	■■■□□ 2.61
DDR1-265	ENST00000509639	MAP3K1	Q13233	1512 aa		31.35	■■■□□ 2.61
DDR1-265	ENST00000509639	DENND4B	O75064	1496 aa	Predicted RBP	31.34	■■■□□ 2.61
DDR1-265	ENST00000509639	ADGRL1	O94910	1474 aa		31.34	■■■□□ 2.61

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms