RNA–Protein interactions for RNA: ENST00000509632.5

SDHA-212, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 4

Gene SDHA, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-212ENST00000509632 CARMIL1Q5VZK9 1371 aa37.34■■■■□ 3.57
SDHA-212ENST00000509632 RUSC2Q8N2Y8 1516 aa37.33■■■■□ 3.57
SDHA-212ENST00000509632 CUL7Q14999 1698 aa37.31■■■■□ 3.56
SDHA-212ENST00000509632 KIAA0586Q9BVV6 1533 aa37.31■■■■□ 3.56
SDHA-212ENST00000509632 NPM1P06748 294 aaKnown RBP eCLIP37.15■■■■□ 3.54
SDHA-212ENST00000509632 TTBK1Q5TCY1 1321 aaPredicted RBP37.04■■■■□ 3.52
SDHA-212ENST00000509632 PTPRGP23470 1445 aa36.99■■■■□ 3.51
SDHA-212ENST00000509632 RAPGEF2Q9Y4G8 1499 aa36.97■■■■□ 3.51
SDHA-212ENST00000509632 CARMIL2Q6F5E8 1435 aa36.96■■■■□ 3.51
SDHA-212ENST00000509632 FAM69CQ0P6D2 419 aa36.95■■■■□ 3.51
SDHA-212ENST00000509632 ADCY10Q96PN6 1610 aa36.92■■■■□ 3.5
SDHA-212ENST00000509632 TNIKQ9UKE5 1360 aa36.91■■■■□ 3.5
SDHA-212ENST00000509632 IQGAP2Q13576 1575 aa36.91■■■■□ 3.5
SDHA-212ENST00000509632 ABCC10Q5T3U5 1492 aa36.84■■■■□ 3.49
SDHA-212ENST00000509632 KIF13AQ9H1H9 1805 aa36.83■■■■□ 3.49
SDHA-212ENST00000509632 MAPKBP1O60336 1514 aa36.83■■■■□ 3.49
SDHA-212ENST00000509632 DISP1Q96F81 1524 aa36.76■■■■□ 3.48
SDHA-212ENST00000509632 UGGT2Q9NYU1 1516 aa36.7■■■■□ 3.47
SDHA-212ENST00000509632 ABCC2Q92887 1545 aa36.67■■■■□ 3.46
SDHA-212ENST00000509632 UACAQ9BZF9 1416 aa36.67■■■■□ 3.46
SDHA-212ENST00000509632 DIP2BQ9P265 1576 aa36.66■■■■□ 3.46
SDHA-212ENST00000509632 PRXQ9BXM0 1461 aa36.63■■■■□ 3.45
SDHA-212ENST00000509632 UHRF1BP1LA0JNW5 1464 aa36.62■■■■□ 3.45
SDHA-212ENST00000509632 AEBP2Q6ZN18 517 aaPredicted RBP36.61■■■■□ 3.45
SDHA-212ENST00000509632 CSRNP3Q8WYN3 585 aa36.56■■■■□ 3.44
SDHA-212ENST00000509632 ASXL2Q76L83 1435 aa36.56■■■■□ 3.44
SDHA-212ENST00000509632 KIAA0556O60303 1618 aa36.56■■■■□ 3.44
SDHA-212ENST00000509632 PLB1Q6P1J6 1458 aa36.52■■■■□ 3.44
SDHA-212ENST00000509632 CTTNBP2Q8WZ74 1663 aa36.48■■■■□ 3.43
SDHA-212ENST00000509632 GOLGA3Q08378 1498 aa36.48■■■■□ 3.43
SDHA-212ENST00000509632 KDM5BQ9UGL1 1544 aa36.45■■■■□ 3.43
SDHA-212ENST00000509632 TSPOAP1O95153 1857 aa36.45■■■■□ 3.43
SDHA-212ENST00000509632 P3H3Q8IVL6 736 aa36.37■■■■□ 3.41
SDHA-212ENST00000509632 FAM9AQ8IZU1 332 aaPredicted RBP36.35■■■■□ 3.41
SDHA-212ENST00000509632 GLI2P10070 1586 aa36.34■■■■□ 3.41
SDHA-212ENST00000509632 KDM6BO15054 1643 aa36.31■■■■□ 3.4
SDHA-212ENST00000509632 ZCCHC11Q5TAX3 1644 aaKnown RBP36.31■■■■□ 3.4
SDHA-212ENST00000509632 EPRSP07814 1512 aaKnown RBP36.31■■■■□ 3.4
SDHA-212ENST00000509632 EEA1Q15075 1411 aa36.3■■■■□ 3.4
SDHA-212ENST00000509632 ABCA8O94911 1581 aa36.23■■■■□ 3.39
SDHA-212ENST00000509632 KCNH8Q96L42 1107 aa36.23■■■■□ 3.39
SDHA-212ENST00000509632 WDR7Q9Y4E6 1490 aa36.2■■■■□ 3.39
SDHA-212ENST00000509632 RANGAP1P46060 587 aaPredicted RBP36.2■■■■□ 3.39
SDHA-212ENST00000509632 ARID3CA6NKF2 412 aa36.17■■■■□ 3.38
SDHA-212ENST00000509632 PPRC1Q5VV67 1664 aaKnown RBP36.16■■■■□ 3.38
SDHA-212ENST00000509632 MAP3K4Q9Y6R4 1608 aa36.11■■■■□ 3.37
SDHA-212ENST00000509632 CHIC1Q5VXU3 224 aa36.1■■■■□ 3.37
SDHA-212ENST00000509632 TEX14Q8IWB6 1497 aa36.07■■■■□ 3.37
SDHA-212ENST00000509632 COL17A1Q9UMD9 1497 aaPredicted RBP36.05■■■■□ 3.36
SDHA-212ENST00000509632 SAMD9Q5K651 1589 aa36.03■■■■□ 3.36
SDHA-212ENST00000509632 CD109Q6YHK3 1445 aa36.03■■■■□ 3.36
SDHA-212ENST00000509632 KDM4FA0A1W2PPD8 638 aa36.03■■■■□ 3.36
SDHA-212ENST00000509632 ATP10BO94823 1461 aa36.03■■■■□ 3.36
SDHA-212ENST00000509632 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.98■■■■□ 3.35
SDHA-212ENST00000509632 HNRNPUL2Q1KMD3 747 aaKnown RBP35.98■■■■□ 3.35
SDHA-212ENST00000509632 EHMT2Q96KQ7 1210 aa35.98■■■■□ 3.35
SDHA-212ENST00000509632 FHOD3Q2V2M9 1422 aa35.93■■■■□ 3.34
SDHA-212ENST00000509632 MAGI3Q5TCQ9 1506 aa35.92■■■■□ 3.34
SDHA-212ENST00000509632 UBTFP17480 764 aaKnown RBP35.91■■■■□ 3.34
SDHA-212ENST00000509632 KIF21BO75037 1637 aa35.9■■■■□ 3.34
SDHA-212ENST00000509632 RAPGEF6Q8TEU7 1601 aa35.88■■■■□ 3.33
SDHA-212ENST00000509632 CFAP43Q8NDM7 1665 aa35.87■■■■□ 3.33
SDHA-212ENST00000509632 NUP153P49790 1475 aaKnown RBP35.8■■■■□ 3.32
SDHA-212ENST00000509632 PLEKHD1A6NEE1 506 aa35.76■■■■□ 3.32
SDHA-212ENST00000509632 EFCAB5A4FU69 1503 aa35.74■■■■□ 3.31
SDHA-212ENST00000509632 ADGRL1O94910 1474 aa35.67■■■■□ 3.3
SDHA-212ENST00000509632 ABCA9Q8IUA7 1624 aa35.67■■■■□ 3.3
SDHA-212ENST00000509632 PHLDB1Q86UU1 1377 aa35.64■■■■□ 3.3
SDHA-212ENST00000509632 ARAP3Q8WWN8 1544 aa35.63■■■■□ 3.29
SDHA-212ENST00000509632 ATP1B4Q9UN42 357 aaPredicted RBP35.63■■■■□ 3.29
SDHA-212ENST00000509632 RAPGEF3O95398 923 aa35.58■■■■□ 3.29
SDHA-212ENST00000509632 ARHGAP35Q9NRY4 1499 aa35.54■■■■□ 3.28
SDHA-212ENST00000509632 NEO1Q92859 1461 aa35.53■■■■□ 3.28
SDHA-212ENST00000509632 FMN1Q68DA7 1419 aa35.52■■■■□ 3.28
SDHA-212ENST00000509632 CDK13Q14004 1512 aaKnown RBP35.47■■■■□ 3.27
SDHA-212ENST00000509632 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.42■■■■□ 3.262e-7■■□□□ 12
SDHA-212ENST00000509632 CDK11AQ9UQ88 783 aaPredicted RBP35.41■■■■□ 3.26
SDHA-212ENST00000509632 AKNAQ7Z591 1439 aa35.39■■■■□ 3.26
SDHA-212ENST00000509632 FANCAO15360 1455 aa35.35■■■■□ 3.25
SDHA-212ENST00000509632 HECW1Q76N89 1606 aa35.34■■■■□ 3.25
SDHA-212ENST00000509632 DENND4BO75064 1496 aaPredicted RBP35.32■■■■□ 3.24
SDHA-212ENST00000509632 TTC37Q6PGP7 1564 aa35.31■■■■□ 3.24
SDHA-212ENST00000509632 ARID4BQ4LE39 1312 aaPredicted RBP35.28■■■■□ 3.24
SDHA-212ENST00000509632 PLCH2O75038 1416 aa35.27■■■■□ 3.24
SDHA-212ENST00000509632 FRMPD1Q5SYB0 1578 aa35.26■■■■□ 3.24
SDHA-212ENST00000509632 EFCAB2Q5VUJ9 269 aa35.22■■■■□ 3.23
SDHA-212ENST00000509632 CFAP74Q9C0B2 1584 aa35.21■■■■□ 3.23
SDHA-212ENST00000509632 TROQ12816 1431 aaPredicted RBP35.19■■■■□ 3.22
SDHA-212ENST00000509632 SCAPERQ9BY12 1400 aa35.18■■■■□ 3.22
SDHA-212ENST00000509632 CASKIN1Q8WXD9 1431 aa35.15■■■■□ 3.22
SDHA-212ENST00000509632 RICTORQ6R327 1708 aa35.15■■■■□ 3.22
SDHA-212ENST00000509632 CLIP1P30622 1438 aa35.15■■■■□ 3.22
SDHA-212ENST00000509632 KIF14Q15058 1648 aa35.1■■■■□ 3.21
SDHA-212ENST00000509632 LRRIQ1Q96JM4 1722 aa35.07■■■■□ 3.2
SDHA-212ENST00000509632 YEATS2Q9ULM3 1422 aa35.06■■■■□ 3.2
SDHA-212ENST00000509632 ADAMTSL3P82987 1691 aa35.06■■■■□ 3.2
SDHA-212ENST00000509632 HECW2Q9P2P5 1572 aa35.06■■■■□ 3.2
SDHA-212ENST00000509632 PCF11O94913 1555 aaKnown RBP35.05■■■■□ 3.2
SDHA-212ENST00000509632 ARHGEF40Q8TER5 1519 aa35.05■■■■□ 3.2
SDHA-212ENST00000509632 POGZQ7Z3K3 1410 aa35.05■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 1485 ms