RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 CUL7Q14999 1698 aa21.85■■□□□ 1.09
KDM3B-206ENST00000509468 RUSC2Q8N2Y8 1516 aa21.81■■□□□ 1.08
KDM3B-206ENST00000509468 KIAA0586Q9BVV6 1533 aa21.8■■□□□ 1.08
KDM3B-206ENST00000509468 CARMIL1Q5VZK9 1371 aa21.77■■□□□ 1.08
KDM3B-206ENST00000509468 NPM1P06748 294 aaKnown RBP eCLIP21.75■■□□□ 1.07
KDM3B-206ENST00000509468 CARMIL2Q6F5E8 1435 aa21.62■■□□□ 1.05
KDM3B-206ENST00000509468 KIF13AQ9H1H9 1805 aa21.61■■□□□ 1.05
KDM3B-206ENST00000509468 PTPRGP23470 1445 aa21.6■■□□□ 1.05
KDM3B-206ENST00000509468 ADCY10Q96PN6 1610 aa21.58■■□□□ 1.04
KDM3B-206ENST00000509468 FAM69CQ0P6D2 419 aa21.57■■□□□ 1.04
KDM3B-206ENST00000509468 RAPGEF2Q9Y4G8 1499 aa21.57■■□□□ 1.04
KDM3B-206ENST00000509468 IQGAP2Q13576 1575 aa21.57■■□□□ 1.04
KDM3B-206ENST00000509468 MAPKBP1O60336 1514 aa21.56■■□□□ 1.04
KDM3B-206ENST00000509468 TNIKQ9UKE5 1360 aa21.55■■□□□ 1.04
KDM3B-206ENST00000509468 ABCC10Q5T3U5 1492 aa21.54■■□□□ 1.04
KDM3B-206ENST00000509468 TTBK1Q5TCY1 1321 aaPredicted RBP21.54■■□□□ 1.04
KDM3B-206ENST00000509468 AEBP2Q6ZN18 517 aaPredicted RBP21.47■■□□□ 1.03
KDM3B-206ENST00000509468 UGGT2Q9NYU1 1516 aa21.45■■□□□ 1.02
KDM3B-206ENST00000509468 DIP2BQ9P265 1576 aa21.44■■□□□ 1.02
KDM3B-206ENST00000509468 DISP1Q96F81 1524 aa21.44■■□□□ 1.02
KDM3B-206ENST00000509468 UHRF1BP1LA0JNW5 1464 aa21.42■■□□□ 1.02
KDM3B-206ENST00000509468 ABCC2Q92887 1545 aa21.42■■□□□ 1.02
KDM3B-206ENST00000509468 UACAQ9BZF9 1416 aa21.41■■□□□ 1.02
KDM3B-206ENST00000509468 CTTNBP2Q8WZ74 1663 aa21.37■■□□□ 1.01
KDM3B-206ENST00000509468 PLB1Q6P1J6 1458 aa21.36■■□□□ 1.01
KDM3B-206ENST00000509468 TSPOAP1O95153 1857 aa21.36■■□□□ 1.01
KDM3B-206ENST00000509468 PRXQ9BXM0 1461 aa21.34■■□□□ 1.01
KDM3B-206ENST00000509468 KIAA0556O60303 1618 aa21.34■■□□□ 1.01
KDM3B-206ENST00000509468 ASXL2Q76L83 1435 aa21.34■■□□□ 1.01
KDM3B-206ENST00000509468 GOLGA3Q08378 1498 aa21.33■■□□□ 1.01
KDM3B-206ENST00000509468 FAM9AQ8IZU1 332 aaPredicted RBP21.32■■□□□ 1
KDM3B-206ENST00000509468 KDM5BQ9UGL1 1544 aa21.3■■□□□ 1
KDM3B-206ENST00000509468 GLI2P10070 1586 aa21.29■■□□□ 1
KDM3B-206ENST00000509468 CSRNP3Q8WYN3 585 aa21.29■■□□□ 1
KDM3B-206ENST00000509468 KDM6BO15054 1643 aa21.27■■□□□ 1
KDM3B-206ENST00000509468 ZCCHC11Q5TAX3 1644 aaKnown RBP21.25■□□□□ 0.99
KDM3B-206ENST00000509468 EPRSP07814 1512 aaKnown RBP21.2■□□□□ 0.98
KDM3B-206ENST00000509468 EEA1Q15075 1411 aa21.19■□□□□ 0.98
KDM3B-206ENST00000509468 PPRC1Q5VV67 1664 aaKnown RBP21.16■□□□□ 0.98
KDM3B-206ENST00000509468 ABCA8O94911 1581 aa21.16■□□□□ 0.98
KDM3B-206ENST00000509468 MAP3K4Q9Y6R4 1608 aa21.15■□□□□ 0.98
KDM3B-206ENST00000509468 WDR7Q9Y4E6 1490 aa21.14■□□□□ 0.98
KDM3B-206ENST00000509468 P3H3Q8IVL6 736 aa21.14■□□□□ 0.97
KDM3B-206ENST00000509468 TEX14Q8IWB6 1497 aa21.13■□□□□ 0.97
KDM3B-206ENST00000509468 KCNH8Q96L42 1107 aa21.12■□□□□ 0.97
KDM3B-206ENST00000509468 SAMD9Q5K651 1589 aa21.05■□□□□ 0.96
KDM3B-206ENST00000509468 CD109Q6YHK3 1445 aa21.04■□□□□ 0.96
KDM3B-206ENST00000509468 KDM4FA0A1W2PPD8 638 aa21.04■□□□□ 0.96
KDM3B-206ENST00000509468 CFAP43Q8NDM7 1665 aa21.04■□□□□ 0.96
KDM3B-206ENST00000509468 ATP10BO94823 1461 aa21.02■□□□□ 0.96
KDM3B-206ENST00000509468 COL17A1Q9UMD9 1497 aaPredicted RBP21.01■□□□□ 0.95
KDM3B-206ENST00000509468 MAGI3Q5TCQ9 1506 aa21.01■□□□□ 0.95
KDM3B-206ENST00000509468 RANGAP1P46060 587 aaPredicted RBP21.01■□□□□ 0.95
KDM3B-206ENST00000509468 ARID3CA6NKF2 412 aa21■□□□□ 0.95
KDM3B-206ENST00000509468 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.98■□□□□ 0.95
KDM3B-206ENST00000509468 HNRNPUL2Q1KMD3 747 aaKnown RBP20.98■□□□□ 0.95
KDM3B-206ENST00000509468 KIF21BO75037 1637 aa20.96■□□□□ 0.95
KDM3B-206ENST00000509468 RAPGEF6Q8TEU7 1601 aa20.96■□□□□ 0.95
KDM3B-206ENST00000509468 CHIC1Q5VXU3 224 aa20.94■□□□□ 0.94
KDM3B-206ENST00000509468 UBTFP17480 764 aaKnown RBP20.91■□□□□ 0.94
KDM3B-206ENST00000509468 FHOD3Q2V2M9 1422 aa20.89■□□□□ 0.94
KDM3B-206ENST00000509468 PHLDB1Q86UU1 1377 aa20.89■□□□□ 0.93
KDM3B-206ENST00000509468 EFCAB5A4FU69 1503 aa20.88■□□□□ 0.93
KDM3B-206ENST00000509468 PLEKHD1A6NEE1 506 aa20.88■□□□□ 0.93
KDM3B-206ENST00000509468 ABCA9Q8IUA7 1624 aa20.87■□□□□ 0.93
KDM3B-206ENST00000509468 NUP153P49790 1475 aaKnown RBP20.87■□□□□ 0.93
KDM3B-206ENST00000509468 ARAP3Q8WWN8 1544 aa20.86■□□□□ 0.93
KDM3B-206ENST00000509468 ADGRL1O94910 1474 aa20.86■□□□□ 0.93
KDM3B-206ENST00000509468 EHMT2Q96KQ7 1210 aa20.82■□□□□ 0.92
KDM3B-206ENST00000509468 NEO1Q92859 1461 aa20.79■□□□□ 0.92
KDM3B-206ENST00000509468 RAPGEF3O95398 923 aa20.74■□□□□ 0.91
KDM3B-206ENST00000509468 FMN1Q68DA7 1419 aa20.74■□□□□ 0.91
KDM3B-206ENST00000509468 ATP1B4Q9UN42 357 aaPredicted RBP20.74■□□□□ 0.91
KDM3B-206ENST00000509468 CDK11AQ9UQ88 783 aaPredicted RBP20.71■□□□□ 0.91
KDM3B-206ENST00000509468 ARHGAP35Q9NRY4 1499 aa20.69■□□□□ 0.9
KDM3B-206ENST00000509468 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.68■□□□□ 0.9
KDM3B-206ENST00000509468 AKNAQ7Z591 1439 aa20.66■□□□□ 0.9
KDM3B-206ENST00000509468 CFAP74Q9C0B2 1584 aa20.66■□□□□ 0.9
KDM3B-206ENST00000509468 CDK13Q14004 1512 aaKnown RBP20.65■□□□□ 0.9
KDM3B-206ENST00000509468 HECW1Q76N89 1606 aa20.64■□□□□ 0.9
KDM3B-206ENST00000509468 FANCAO15360 1455 aa20.64■□□□□ 0.89
KDM3B-206ENST00000509468 DENND4BO75064 1496 aaPredicted RBP20.63■□□□□ 0.89
KDM3B-206ENST00000509468 TTC37Q6PGP7 1564 aa20.6■□□□□ 0.89
KDM3B-206ENST00000509468 PLCH2O75038 1416 aa20.6■□□□□ 0.89
KDM3B-206ENST00000509468 FRMPD1Q5SYB0 1578 aa20.59■□□□□ 0.89
KDM3B-206ENST00000509468 ARID4BQ4LE39 1312 aaPredicted RBP20.59■□□□□ 0.89
KDM3B-206ENST00000509468 RICTORQ6R327 1708 aa20.58■□□□□ 0.89
KDM3B-206ENST00000509468 EFCAB2Q5VUJ9 269 aa20.57■□□□□ 0.88
KDM3B-206ENST00000509468 ADAMTSL3P82987 1691 aa20.54■□□□□ 0.88
KDM3B-206ENST00000509468 CLIP1P30622 1438 aa20.53■□□□□ 0.88
KDM3B-206ENST00000509468 MYO5CQ9NQX4 1742 aa20.53■□□□□ 0.88
KDM3B-206ENST00000509468 TROQ12816 1431 aaPredicted RBP20.53■□□□□ 0.88
KDM3B-206ENST00000509468 SCAPERQ9BY12 1400 aa20.53■□□□□ 0.88
KDM3B-206ENST00000509468 HECW2Q9P2P5 1572 aa20.52■□□□□ 0.88
KDM3B-206ENST00000509468 MAGI2Q86UL8 1455 aa20.52■□□□□ 0.88
KDM3B-206ENST00000509468 BCORL1Q5H9F3 1711 aa20.51■□□□□ 0.87
KDM3B-206ENST00000509468 CASKIN1Q8WXD9 1431 aa20.51■□□□□ 0.87
KDM3B-206ENST00000509468 KIF14Q15058 1648 aa20.5■□□□□ 0.87
KDM3B-206ENST00000509468 LRRIQ1Q96JM4 1722 aa20.5■□□□□ 0.87
KDM3B-206ENST00000509468 ZMYM4Q5VZL5 1548 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms