RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 AQRO60306 1485 aaKnown RBP eCLIP14.04□□□□□ -0.16
HTT-205ENST00000509043 GRIN2BQ13224 1484 aa14.01□□□□□ -0.17
HTT-205ENST00000509043 PBRM1Q86U86 1689 aa14□□□□□ -0.17
HTT-205ENST00000509043 FYCO1Q9BQS8 1478 aa13.99□□□□□ -0.17
HTT-205ENST00000509043 FMN1Q68DA7 1419 aa13.99□□□□□ -0.17
HTT-205ENST00000509043 TIAM1Q13009 1591 aa13.99□□□□□ -0.17
HTT-205ENST00000509043 ERCC6Q03468 1493 aa13.98□□□□□ -0.17
HTT-205ENST00000509043 ADAMTS12P58397 1594 aa13.97□□□□□ -0.17
HTT-205ENST00000509043 SAMD9Q5K651 1589 aa13.97□□□□□ -0.17
HTT-205ENST00000509043 CASKIN1Q8WXD9 1431 aa13.97□□□□□ -0.17
HTT-205ENST00000509043 RRBP1Q9P2E9 1410 aaKnown RBP13.97□□□□□ -0.17
HTT-205ENST00000509043 TTBK1Q5TCY1 1321 aaPredicted RBP13.96□□□□□ -0.17
HTT-205ENST00000509043 CCER1Q8TC90 406 aaPredicted RBP13.96□□□□□ -0.17
HTT-205ENST00000509043 CFAP43Q8NDM7 1665 aa13.95□□□□□ -0.18
HTT-205ENST00000509043 THOC2Q8NI27 1593 aaKnown RBP13.93□□□□□ -0.18
HTT-205ENST00000509043 LRRC9Q6ZRR7 1453 aa13.92□□□□□ -0.18
HTT-205ENST00000509043 PCF11O94913 1555 aaKnown RBP13.92□□□□□ -0.18
HTT-205ENST00000509043 KANK4Q5T7N3 995 aaPredicted RBP13.91□□□□□ -0.18
HTT-205ENST00000509043 FHOD3Q2V2M9 1422 aa13.9□□□□□ -0.18
HTT-205ENST00000509043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.89□□□□□ -0.19
HTT-205ENST00000509043 IQGAP2Q13576 1575 aa13.88□□□□□ -0.19
HTT-205ENST00000509043 MAGI1Q96QZ7 1491 aaPredicted RBP13.88□□□□□ -0.19
HTT-205ENST00000509043 CCNB3Q8WWL7 1395 aa13.88□□□□□ -0.19
HTT-205ENST00000509043 EIF4G3O43432 1585 aaKnown RBP13.87□□□□□ -0.19
HTT-205ENST00000509043 SNAPC4Q5SXM2 1469 aa13.87□□□□□ -0.19
HTT-205ENST00000509043 CLSPNQ9HAW4 1339 aa13.86□□□□□ -0.19
HTT-205ENST00000509043 UGGT2Q9NYU1 1516 aa13.85□□□□□ -0.19
HTT-205ENST00000509043 ZNF608Q9ULD9 1512 aaPredicted RBP13.85□□□□□ -0.19
HTT-205ENST00000509043 KIAA0586Q9BVV6 1533 aa13.85□□□□□ -0.19
HTT-205ENST00000509043 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.84□□□□□ -0.19
HTT-205ENST00000509043 HNRNPUL2Q1KMD3 747 aaKnown RBP13.83□□□□□ -0.2
HTT-205ENST00000509043 CCDC18Q5T9S5 1454 aa13.82□□□□□ -0.2
HTT-205ENST00000509043 GRIN2AQ12879 1464 aa13.81□□□□□ -0.2
HTT-205ENST00000509043 P3H3Q8IVL6 736 aa13.81□□□□□ -0.2
HTT-205ENST00000509043 SYNJ2O15056 1496 aa13.8□□□□□ -0.2
HTT-205ENST00000509043 HECW1Q76N89 1606 aa13.79□□□□□ -0.2
HTT-205ENST00000509043 EHBP1L1Q8N3D4 1523 aa13.77□□□□□ -0.21
HTT-205ENST00000509043 PHLDB1Q86UU1 1377 aa13.76□□□□□ -0.21
HTT-205ENST00000509043 MTUS2Q5JR59 1369 aa13.75□□□□□ -0.21
HTT-205ENST00000509043 KIAA0556O60303 1618 aa13.73□□□□□ -0.21
HTT-205ENST00000509043 ATP1B4Q9UN42 357 aaPredicted RBP13.73□□□□□ -0.21
HTT-205ENST00000509043 NUP160Q12769 1436 aa13.73□□□□□ -0.21
HTT-205ENST00000509043 SUPT6HQ7KZ85 1726 aaKnown RBP13.71□□□□□ -0.21
HTT-205ENST00000509043 CHMP7Q8WUX9 453 aaPredicted RBP13.71□□□□□ -0.21
HTT-205ENST00000509043 DISP1Q96F81 1524 aa13.7□□□□□ -0.22
HTT-205ENST00000509043 FGD6Q6ZV73 1430 aa13.69□□□□□ -0.22
HTT-205ENST00000509043 DHX57Q6P158 1386 aaKnown RBP13.69□□□□□ -0.22
HTT-205ENST00000509043 ARHGEF11O15085 1522 aa13.69□□□□□ -0.22
HTT-205ENST00000509043 EPRSP07814 1512 aaKnown RBP13.69□□□□□ -0.22
HTT-205ENST00000509043 MYOM3Q5VTT5 1437 aa13.68□□□□□ -0.22
HTT-205ENST00000509043 CARMIL2Q6F5E8 1435 aa13.68□□□□□ -0.22
HTT-205ENST00000509043 NCOA2Q15596 1464 aa13.67□□□□□ -0.22
HTT-205ENST00000509043 LRRIQ1Q96JM4 1722 aa13.67□□□□□ -0.22
HTT-205ENST00000509043 CEP170Q5SW79 1584 aa13.67□□□□□ -0.22
HTT-205ENST00000509043 SETD5Q9C0A6 1442 aa13.67□□□□□ -0.22
HTT-205ENST00000509043 MIA2Q96PC5 1412 aa13.64□□□□□ -0.23
HTT-205ENST00000509043 FAM50AQ14320 339 aaKnown RBP13.63□□□□□ -0.23
HTT-205ENST00000509043 CDK11AQ9UQ88 783 aaPredicted RBP13.63□□□□□ -0.23
HTT-205ENST00000509043 RAPGEF6Q8TEU7 1601 aa13.63□□□□□ -0.23
HTT-205ENST00000509043 TCOF1Q13428 1488 aaKnown RBP13.62□□□□□ -0.23
HTT-205ENST00000509043 RAB3GAP2Q9H2M9 1393 aa13.62□□□□□ -0.23
HTT-205ENST00000509043 ACIN1Q9UKV3 1341 aaKnown RBP13.62□□□□□ -0.23
HTT-205ENST00000509043 MAGI3Q5TCQ9 1506 aa13.59□□□□□ -0.23
HTT-205ENST00000509043 JPH4Q96JJ6 628 aa13.59□□□□□ -0.23
HTT-205ENST00000509043 NUP153P49790 1475 aaKnown RBP13.59□□□□□ -0.23
HTT-205ENST00000509043 PTPN23Q9H3S7 1636 aa13.57□□□□□ -0.24
HTT-205ENST00000509043 HFM1A2PYH4 1435 aa13.57□□□□□ -0.24
HTT-205ENST00000509043 AKNAQ7Z591 1439 aa13.57□□□□□ -0.24
HTT-205ENST00000509043 ITGAEP38570 1179 aa13.57□□□□□ -0.24
HTT-205ENST00000509043 CDK13Q14004 1512 aaKnown RBP13.56□□□□□ -0.24
HTT-205ENST00000509043 FBLN2P98095 1184 aa13.56□□□□□ -0.24
HTT-205ENST00000509043 ZNF316A6NFI3 1004 aaPredicted RBP13.55□□□□□ -0.24
HTT-205ENST00000509043 TIMELESSQ9UNS1 1208 aa13.55□□□□□ -0.24
HTT-205ENST00000509043 TROQ12816 1431 aaPredicted RBP13.53□□□□□ -0.24
HTT-205ENST00000509043 ABCA8O94911 1581 aa13.52□□□□□ -0.25
HTT-205ENST00000509043 ADCY10Q96PN6 1610 aa13.51□□□□□ -0.25
HTT-205ENST00000509043 MAPKBP1O60336 1514 aa13.5□□□□□ -0.25
HTT-205ENST00000509043 SHROOM2Q13796 1616 aa13.5□□□□□ -0.25
HTT-205ENST00000509043 PLB1Q6P1J6 1458 aa13.48□□□□□ -0.25
HTT-205ENST00000509043 NAIPQ13075 1403 aa13.48□□□□□ -0.25
HTT-205ENST00000509043 UACAQ9BZF9 1416 aa13.48□□□□□ -0.25
HTT-205ENST00000509043 ITSN2Q9NZM3 1697 aa13.48□□□□□ -0.25
HTT-205ENST00000509043 PRG4Q92954 1404 aaPredicted RBP13.47□□□□□ -0.25
HTT-205ENST00000509043 CHD1O14646 1710 aa13.47□□□□□ -0.25
HTT-205ENST00000509043 ROCK1Q13464 1354 aa13.47□□□□□ -0.25
HTT-205ENST00000509043 DIEXFQ68CQ4 756 aaKnown RBP13.47□□□□□ -0.25
HTT-205ENST00000509043 PTPRKQ15262 1439 aa13.47□□□□□ -0.25
HTT-205ENST00000509043 GCC2Q8IWJ2 1684 aa13.47□□□□□ -0.25
HTT-205ENST00000509043 PTPRGP23470 1445 aa13.45□□□□□ -0.26
HTT-205ENST00000509043 DNMT1P26358 1616 aaKnown RBP13.43□□□□□ -0.26
HTT-205ENST00000509043 PLEKHD1A6NEE1 506 aa13.42□□□□□ -0.26
HTT-205ENST00000509043 KIF14Q15058 1648 aa13.42□□□□□ -0.26
HTT-205ENST00000509043 ATP10BO94823 1461 aa13.42□□□□□ -0.26
HTT-205ENST00000509043 DAPK1P53355 1430 aa13.41□□□□□ -0.26
HTT-205ENST00000509043 GPATCH8Q9UKJ3 1502 aaKnown RBP13.4□□□□□ -0.26
HTT-205ENST00000509043 CLASP1Q7Z460 1538 aa13.39□□□□□ -0.27
HTT-205ENST00000509043 CFDP1Q9UEE9 299 aaPredicted RBP13.38□□□□□ -0.27
HTT-205ENST00000509043 ABCC5O15440 1437 aa13.38□□□□□ -0.27
HTT-205ENST00000509043 CAMSAP2Q08AD1 1489 aa13.37□□□□□ -0.27
HTT-205ENST00000509043 ABCC10Q5T3U5 1492 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms