RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 ERICH3Q5RHP9 1530 aa19.97■□□□□ 0.79
TRIM41-204ENST00000508930 KIF27Q86VH2 1401 aa19.96■□□□□ 0.79
TRIM41-204ENST00000508930 ATAD2BQ9ULI0 1458 aa19.95■□□□□ 0.78
TRIM41-204ENST00000508930 WDR97A6NE52 1622 aa19.94■□□□□ 0.78
TRIM41-204ENST00000508930 MSH5O43196 834 aa19.93■□□□□ 0.78
TRIM41-204ENST00000508930 TIMELESSQ9UNS1 1208 aa19.92■□□□□ 0.78
TRIM41-204ENST00000508930 TONSLQ96HA7 1378 aa19.91■□□□□ 0.78
TRIM41-204ENST00000508930 P3H3Q8IVL6 736 aa19.91■□□□□ 0.78
TRIM41-204ENST00000508930 TOP2BQ02880 1626 aa19.91■□□□□ 0.78
TRIM41-204ENST00000508930 MAPKBP1O60336 1514 aa19.91■□□□□ 0.78
TRIM41-204ENST00000508930 UNC13AQ9UPW8 1703 aa19.9■□□□□ 0.78
TRIM41-204ENST00000508930 ARHGAP35Q9NRY4 1499 aa19.88■□□□□ 0.77
TRIM41-204ENST00000508930 PEG3Q9GZU2 1588 aa19.85■□□□□ 0.77
TRIM41-204ENST00000508930 FANCIQ9NVI1 1328 aa19.85■□□□□ 0.77
TRIM41-204ENST00000508930 PHLDB1Q86UU1 1377 aa19.8■□□□□ 0.76
TRIM41-204ENST00000508930 PPP4R2Q9NY27 417 aa19.76■□□□□ 0.75
TRIM41-204ENST00000508930 MYT1LQ9UL68 1186 aa19.76■□□□□ 0.75
TRIM41-204ENST00000508930 BICRAQ9NZM4 1560 aa19.75■□□□□ 0.75
TRIM41-204ENST00000508930 LRRC9Q6ZRR7 1453 aa19.73■□□□□ 0.75
TRIM41-204ENST00000508930 FAM9BQ8IZU0 186 aa19.71■□□□□ 0.75
TRIM41-204ENST00000508930 BIVM-ERCC5R4GMW8 1640 aa19.71■□□□□ 0.75
TRIM41-204ENST00000508930 DEKP35659 375 aaKnown RBP19.71■□□□□ 0.75
TRIM41-204ENST00000508930 B4GALNT3Q6L9W6 998 aa19.71■□□□□ 0.75
TRIM41-204ENST00000508930 TIAM1Q13009 1591 aa19.71■□□□□ 0.75
TRIM41-204ENST00000508930 NBR1Q14596 966 aa19.69■□□□□ 0.74
TRIM41-204ENST00000508930 CUX1P39880 1505 aa19.68■□□□□ 0.74
TRIM41-204ENST00000508930 FHAD1B1AJZ9 1412 aa19.67■□□□□ 0.74
TRIM41-204ENST00000508930 CARMIL1Q5VZK9 1371 aa19.67■□□□□ 0.74
TRIM41-204ENST00000508930 ERICH6BQ5W0A0 696 aa19.66■□□□□ 0.74
TRIM41-204ENST00000508930 MRS2Q9HD23 443 aa19.63■□□□□ 0.73
TRIM41-204ENST00000508930 IGF1RP08069 1367 aa19.63■□□□□ 0.73
TRIM41-204ENST00000508930 CNGB1Q14028 1251 aaPredicted RBP19.63■□□□□ 0.73
TRIM41-204ENST00000508930 HSPA5P11021 654 aaKnown RBP19.61■□□□□ 0.73
TRIM41-204ENST00000508930 NOP58Q9Y2X3 529 aaKnown RBP19.6■□□□□ 0.73
TRIM41-204ENST00000508930 MAP3K1Q13233 1512 aa19.59■□□□□ 0.73
TRIM41-204ENST00000508930 RTL5Q5HYW3 569 aaPredicted RBP19.59■□□□□ 0.73
TRIM41-204ENST00000508930 EIF4G2P78344 907 aaKnown RBP eCLIP19.59■□□□□ 0.73
TRIM41-204ENST00000508930 PRKCSHP14314 528 aaPredicted RBP19.56■□□□□ 0.72
TRIM41-204ENST00000508930 MTUS2Q5JR59 1369 aa19.55■□□□□ 0.72
TRIM41-204ENST00000508930 CCDC18Q5T9S5 1454 aa19.55■□□□□ 0.72
TRIM41-204ENST00000508930 ANP32AP39687 249 aaKnown RBP19.54■□□□□ 0.72
TRIM41-204ENST00000508930 FHOD3Q2V2M9 1422 aa19.54■□□□□ 0.72
TRIM41-204ENST00000508930 WASHC2AQ641Q2 1341 aa19.53■□□□□ 0.72
TRIM41-204ENST00000508930 CCDC184Q52MB2 194 aa19.53■□□□□ 0.72
TRIM41-204ENST00000508930 POLR3GLQ9BT43 218 aa19.52■□□□□ 0.71
TRIM41-204ENST00000508930 CHIC2Q9UKJ5 165 aa19.52■□□□□ 0.71
TRIM41-204ENST00000508930 RRP7BPQ9NSQ0 103 aa19.51■□□□□ 0.71
TRIM41-204ENST00000508930 CCDC136Q96JN2 1154 aa19.5■□□□□ 0.71
TRIM41-204ENST00000508930 UACAQ9BZF9 1416 aa19.49■□□□□ 0.71
TRIM41-204ENST00000508930 FGD6Q6ZV73 1430 aa19.46■□□□□ 0.71
TRIM41-204ENST00000508930 ZBTB47Q9UFB7 747 aaPredicted RBP19.46■□□□□ 0.71
TRIM41-204ENST00000508930 PRKRIP1Q9H875 184 aaPredicted RBP19.46■□□□□ 0.71
TRIM41-204ENST00000508930 PAK3O75914 559 aaPredicted RBP19.45■□□□□ 0.7
TRIM41-204ENST00000508930 PCF11O94913 1555 aaKnown RBP19.44■□□□□ 0.7
TRIM41-204ENST00000508930 ZBED9Q6R2W3 1325 aa19.44■□□□□ 0.7
TRIM41-204ENST00000508930 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.43■□□□□ 0.71e-10■■□□□ 14
TRIM41-204ENST00000508930 CFTRP13569 1480 aa19.42■□□□□ 0.7
TRIM41-204ENST00000508930 SENP3-EIF4A1A0A087X0R7 540 aa19.41■□□□□ 0.7
TRIM41-204ENST00000508930 FMN1Q68DA7 1419 aa19.4■□□□□ 0.7
TRIM41-204ENST00000508930 CNTLNQ9NXG0 1405 aa19.4■□□□□ 0.7
TRIM41-204ENST00000508930 HFM1A2PYH4 1435 aa19.39■□□□□ 0.7
TRIM41-204ENST00000508930 NPM2Q86SE8 214 aaKnown RBP19.39■□□□□ 0.69
TRIM41-204ENST00000508930 NCAPD3P42695 1498 aa19.37■□□□□ 0.69
TRIM41-204ENST00000508930 L3MBTL2Q969R5 705 aa19.37■□□□□ 0.69
TRIM41-204ENST00000508930 CASKIN1Q8WXD9 1431 aa19.37■□□□□ 0.69
TRIM41-204ENST00000508930 FYCO1Q9BQS8 1478 aa19.36■□□□□ 0.69
TRIM41-204ENST00000508930 IPO9Q96P70 1041 aaKnown RBP19.36■□□□□ 0.69
TRIM41-204ENST00000508930 FGD5Q6ZNL6 1462 aa19.35■□□□□ 0.69
TRIM41-204ENST00000508930 FOXD1Q16676 465 aa19.35■□□□□ 0.69
TRIM41-204ENST00000508930 PTPRKQ15262 1439 aa19.35■□□□□ 0.69
TRIM41-204ENST00000508930 NAIPQ13075 1403 aa19.34■□□□□ 0.69
TRIM41-204ENST00000508930 CFAP43Q8NDM7 1665 aa19.34■□□□□ 0.69
TRIM41-204ENST00000508930 CCDC7Q96M83 1385 aa19.34■□□□□ 0.69
TRIM41-204ENST00000508930 C11orf95C9JLR9 678 aaPredicted RBP19.33■□□□□ 0.69
TRIM41-204ENST00000508930 AQRO60306 1485 aaKnown RBP eCLIP19.31■□□□□ 0.685e-7■■■■□ 25.2
TRIM41-204ENST00000508930 ZNF326Q5BKZ1 582 aaKnown RBP19.3■□□□□ 0.68
TRIM41-204ENST00000508930 MPHOSPH9Q99550 1183 aa19.3■□□□□ 0.68
TRIM41-204ENST00000508930 HMGXB3Q12766 1538 aa19.3■□□□□ 0.68
TRIM41-204ENST00000508930 NUDCQ9Y266 331 aa19.3■□□□□ 0.68
TRIM41-204ENST00000508930 PTPN23Q9H3S7 1636 aa19.29■□□□□ 0.68
TRIM41-204ENST00000508930 AKNAQ7Z591 1439 aa19.28■□□□□ 0.68
TRIM41-204ENST00000508930 MYOM3Q5VTT5 1437 aa19.26■□□□□ 0.67
TRIM41-204ENST00000508930 ARID3CA6NKF2 412 aa19.26■□□□□ 0.67
TRIM41-204ENST00000508930 RTN4Q9NQC3 1192 aaKnown RBP19.26■□□□□ 0.67
TRIM41-204ENST00000508930 NCOA2Q15596 1464 aa19.24■□□□□ 0.67
TRIM41-204ENST00000508930 CADPSQ9ULU8 1353 aa19.24■□□□□ 0.67
TRIM41-204ENST00000508930 TMC1Q8TDI8 760 aa19.24■□□□□ 0.67
TRIM41-204ENST00000508930 KIF7Q2M1P5 1343 aa19.24■□□□□ 0.67
TRIM41-204ENST00000508930 LAS1LQ9Y4W2 734 aaKnown RBP19.24■□□□□ 0.67
TRIM41-204ENST00000508930 ANO8Q9HCE9 1232 aaPredicted RBP19.22■□□□□ 0.67
TRIM41-204ENST00000508930 EFCAB5A4FU69 1503 aa19.22■□□□□ 0.67
TRIM41-204ENST00000508930 NCOA1Q15788 1441 aa19.21■□□□□ 0.67
TRIM41-204ENST00000508930 NBPF8Q3BBV2 869 aa19.2■□□□□ 0.66
TRIM41-204ENST00000508930 SLC4A1APQ9BWU0 796 aaKnown RBP19.2■□□□□ 0.66
TRIM41-204ENST00000508930 NEFMP07197 916 aa19.19■□□□□ 0.66
TRIM41-204ENST00000508930 SMG6Q86US8 1419 aaKnown RBP19.19■□□□□ 0.66
TRIM41-204ENST00000508930 SALL2Q9Y467 1007 aaPredicted RBP19.19■□□□□ 0.66
TRIM41-204ENST00000508930 RAD54L2Q9Y4B4 1467 aa19.17■□□□□ 0.66
TRIM41-204ENST00000508930 KDM5BQ9UGL1 1544 aa19.15■□□□□ 0.66
TRIM41-204ENST00000508930 IL27Q8NEV9 243 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms