RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 CUL7Q14999 1698 aa14.94□□□□□ -0.02
SNCA-211ENST00000508895 CARMIL1Q5VZK9 1371 aa14.91□□□□□ -0.02
SNCA-211ENST00000508895 JPH4Q96JJ6 628 aa14.89□□□□□ -0.03
SNCA-211ENST00000508895 PRG4Q92954 1404 aaPredicted RBP14.89□□□□□ -0.03
SNCA-211ENST00000508895 KIAA0586Q9BVV6 1533 aa14.86□□□□□ -0.03
SNCA-211ENST00000508895 RAPGEF2Q9Y4G8 1499 aa14.79□□□□□ -0.04
SNCA-211ENST00000508895 ILDR1Q86SU0 546 aaPredicted RBP14.78□□□□□ -0.04
SNCA-211ENST00000508895 IQGAP2Q13576 1575 aa14.76□□□□□ -0.05
SNCA-211ENST00000508895 ADCY10Q96PN6 1610 aa14.75□□□□□ -0.05
SNCA-211ENST00000508895 PRXQ9BXM0 1461 aa14.75□□□□□ -0.05
SNCA-211ENST00000508895 DISP1Q96F81 1524 aa14.74□□□□□ -0.05
SNCA-211ENST00000508895 CTTNBP2Q8WZ74 1663 aa14.71□□□□□ -0.06
SNCA-211ENST00000508895 TTBK1Q5TCY1 1321 aaPredicted RBP14.7□□□□□ -0.06
SNCA-211ENST00000508895 CHIC1Q5VXU3 224 aa14.7□□□□□ -0.06
SNCA-211ENST00000508895 KIF13AQ9H1H9 1805 aa14.69□□□□□ -0.06
SNCA-211ENST00000508895 UGGT2Q9NYU1 1516 aa14.69□□□□□ -0.06
SNCA-211ENST00000508895 FAM9AQ8IZU1 332 aaPredicted RBP14.67□□□□□ -0.06
SNCA-211ENST00000508895 KIAA0556O60303 1618 aa14.66□□□□□ -0.06
SNCA-211ENST00000508895 PTPRGP23470 1445 aa14.66□□□□□ -0.06
SNCA-211ENST00000508895 TNIKQ9UKE5 1360 aa14.65□□□□□ -0.06
SNCA-211ENST00000508895 CSRNP3Q8WYN3 585 aa14.65□□□□□ -0.06
SNCA-211ENST00000508895 CARMIL2Q6F5E8 1435 aa14.61□□□□□ -0.07
SNCA-211ENST00000508895 MAPKBP1O60336 1514 aa14.59□□□□□ -0.07
SNCA-211ENST00000508895 DIP2BQ9P265 1576 aa14.58□□□□□ -0.08
SNCA-211ENST00000508895 ABCC2Q92887 1545 aa14.56□□□□□ -0.08
SNCA-211ENST00000508895 UACAQ9BZF9 1416 aa14.56□□□□□ -0.08
SNCA-211ENST00000508895 ABCC10Q5T3U5 1492 aa14.56□□□□□ -0.08
SNCA-211ENST00000508895 PLB1Q6P1J6 1458 aa14.56□□□□□ -0.08
SNCA-211ENST00000508895 P3H3Q8IVL6 736 aa14.55□□□□□ -0.08
SNCA-211ENST00000508895 EEA1Q15075 1411 aa14.55□□□□□ -0.08
SNCA-211ENST00000508895 UHRF1BP1LA0JNW5 1464 aa14.55□□□□□ -0.08
SNCA-211ENST00000508895 EHMT2Q96KQ7 1210 aa14.54□□□□□ -0.08
SNCA-211ENST00000508895 FAM69CQ0P6D2 419 aa14.53□□□□□ -0.08
SNCA-211ENST00000508895 TSPOAP1O95153 1857 aa14.52□□□□□ -0.08
SNCA-211ENST00000508895 KIF21BO75037 1637 aa14.52□□□□□ -0.08
SNCA-211ENST00000508895 ZCCHC11Q5TAX3 1644 aaKnown RBP14.52□□□□□ -0.08
SNCA-211ENST00000508895 ABCA8O94911 1581 aa14.52□□□□□ -0.08
SNCA-211ENST00000508895 NPM1P06748 294 aaKnown RBP eCLIP14.52□□□□□ -0.09
SNCA-211ENST00000508895 SAMD9Q5K651 1589 aa14.51□□□□□ -0.09
SNCA-211ENST00000508895 KDM5BQ9UGL1 1544 aa14.51□□□□□ -0.09
SNCA-211ENST00000508895 ASXL2Q76L83 1435 aa14.51□□□□□ -0.09
SNCA-211ENST00000508895 RANGAP1P46060 587 aaPredicted RBP14.5□□□□□ -0.09
SNCA-211ENST00000508895 GOLGA3Q08378 1498 aa14.49□□□□□ -0.09
SNCA-211ENST00000508895 PPRC1Q5VV67 1664 aaKnown RBP14.48□□□□□ -0.09
SNCA-211ENST00000508895 ARID3CA6NKF2 412 aa14.45□□□□□ -0.1
SNCA-211ENST00000508895 FHOD3Q2V2M9 1422 aa14.44□□□□□ -0.1
SNCA-211ENST00000508895 EPRSP07814 1512 aaKnown RBP14.42□□□□□ -0.1
SNCA-211ENST00000508895 GLI2P10070 1586 aa14.42□□□□□ -0.1
SNCA-211ENST00000508895 ATP10BO94823 1461 aa14.4□□□□□ -0.1
SNCA-211ENST00000508895 RAPGEF6Q8TEU7 1601 aa14.39□□□□□ -0.11
SNCA-211ENST00000508895 MAP3K4Q9Y6R4 1608 aa14.39□□□□□ -0.11
SNCA-211ENST00000508895 WDR7Q9Y4E6 1490 aa14.38□□□□□ -0.11
SNCA-211ENST00000508895 NUP153P49790 1475 aaKnown RBP14.37□□□□□ -0.11
SNCA-211ENST00000508895 COL17A1Q9UMD9 1497 aaPredicted RBP14.37□□□□□ -0.11
SNCA-211ENST00000508895 UBTFP17480 764 aaKnown RBP14.36□□□□□ -0.11
SNCA-211ENST00000508895 ARHGAP35Q9NRY4 1499 aa14.35□□□□□ -0.11
SNCA-211ENST00000508895 KDM6BO15054 1643 aa14.34□□□□□ -0.11
SNCA-211ENST00000508895 KCNH8Q96L42 1107 aa14.34□□□□□ -0.11
SNCA-211ENST00000508895 EFCAB5A4FU69 1503 aa14.32□□□□□ -0.12
SNCA-211ENST00000508895 KDM4FA0A1W2PPD8 638 aa14.32□□□□□ -0.12
SNCA-211ENST00000508895 LRRIQ1Q96JM4 1722 aa14.29□□□□□ -0.12
SNCA-211ENST00000508895 CDK13Q14004 1512 aaKnown RBP14.29□□□□□ -0.12
SNCA-211ENST00000508895 CFAP43Q8NDM7 1665 aa14.28□□□□□ -0.12
SNCA-211ENST00000508895 CD109Q6YHK3 1445 aa14.25□□□□□ -0.13
SNCA-211ENST00000508895 ABCA9Q8IUA7 1624 aa14.25□□□□□ -0.13
SNCA-211ENST00000508895 MAGI3Q5TCQ9 1506 aa14.24□□□□□ -0.13
SNCA-211ENST00000508895 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.22□□□□□ -0.13
SNCA-211ENST00000508895 HNRNPUL2Q1KMD3 747 aaKnown RBP14.22□□□□□ -0.13
SNCA-211ENST00000508895 TEX14Q8IWB6 1497 aa14.19□□□□□ -0.14
SNCA-211ENST00000508895 PCF11O94913 1555 aaKnown RBP14.19□□□□□ -0.14
SNCA-211ENST00000508895 TTC37Q6PGP7 1564 aa14.19□□□□□ -0.14
SNCA-211ENST00000508895 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.18□□□□□ -0.14
SNCA-211ENST00000508895 HECW1Q76N89 1606 aa14.17□□□□□ -0.14
SNCA-211ENST00000508895 ATP1B4Q9UN42 357 aaPredicted RBP14.17□□□□□ -0.14
SNCA-211ENST00000508895 FMN1Q68DA7 1419 aa14.16□□□□□ -0.14
SNCA-211ENST00000508895 LOC105371045A0A1W2PR82 267 aa14.16□□□□□ -0.14
SNCA-211ENST00000508895 KIF14Q15058 1648 aa14.15□□□□□ -0.14
SNCA-211ENST00000508895 CLIP1P30622 1438 aa14.15□□□□□ -0.14
SNCA-211ENST00000508895 FRMPD1Q5SYB0 1578 aa14.14□□□□□ -0.15
SNCA-211ENST00000508895 PLEKHD1A6NEE1 506 aa14.14□□□□□ -0.15
SNCA-211ENST00000508895 ARAP3Q8WWN8 1544 aa14.12□□□□□ -0.15
SNCA-211ENST00000508895 RAPGEF3O95398 923 aa14.11□□□□□ -0.15
SNCA-211ENST00000508895 CASKIN1Q8WXD9 1431 aa14.11□□□□□ -0.15
SNCA-211ENST00000508895 FBXO41Q8TF61 875 aa14.08□□□□□ -0.16
SNCA-211ENST00000508895 CEP162Q5TB80 1403 aa14.07□□□□□ -0.16
SNCA-211ENST00000508895 RICTORQ6R327 1708 aa14.07□□□□□ -0.16
SNCA-211ENST00000508895 NEO1Q92859 1461 aa14.07□□□□□ -0.16
SNCA-211ENST00000508895 TROQ12816 1431 aaPredicted RBP14.07□□□□□ -0.16
SNCA-211ENST00000508895 ADGRL1O94910 1474 aa14.06□□□□□ -0.16
SNCA-211ENST00000508895 AKNAQ7Z591 1439 aa14.06□□□□□ -0.16
SNCA-211ENST00000508895 FANCAO15360 1455 aa14.06□□□□□ -0.16
SNCA-211ENST00000508895 FYCO1Q9BQS8 1478 aa14.05□□□□□ -0.16
SNCA-211ENST00000508895 SIGLEC1Q9BZZ2 1709 aa14.04□□□□□ -0.16
SNCA-211ENST00000508895 MYO5CQ9NQX4 1742 aa14.04□□□□□ -0.16
SNCA-211ENST00000508895 CDC42BPBQ9Y5S2 1711 aa14.04□□□□□ -0.16
SNCA-211ENST00000508895 PLCH2O75038 1416 aa14.04□□□□□ -0.16
SNCA-211ENST00000508895 HECW2Q9P2P5 1572 aa14.02□□□□□ -0.16
SNCA-211ENST00000508895 CDC42BPAQ5VT25 1732 aa14.01□□□□□ -0.17
SNCA-211ENST00000508895 CCDC18Q5T9S5 1454 aa14□□□□□ -0.17
SNCA-211ENST00000508895 PHLDB1Q86UU1 1377 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms