RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 JPH4Q96JJ6 628 aa40.98■■■■■ 4.15
SRPK1-210ENST00000508473 PRG4Q92954 1404 aaPredicted RBP40.92■■■■■ 4.14
SRPK1-210ENST00000508473 KIAA0586Q9BVV6 1533 aa40.87■■■■■ 4.13
SRPK1-210ENST00000508473 RAPGEF2Q9Y4G8 1499 aa40.77■■■■■ 4.12
SRPK1-210ENST00000508473 TRHP20396 242 aaPredicted RBP40.66■■■■■ 4.1
SRPK1-210ENST00000508473 IQGAP2Q13576 1575 aa40.57■■■■■ 4.09
SRPK1-210ENST00000508473 PRXQ9BXM0 1461 aa40.55■■■■■ 4.08
SRPK1-210ENST00000508473 CHIC1Q5VXU3 224 aa40.53■■■■■ 4.08
SRPK1-210ENST00000508473 CSRNP3Q8WYN3 585 aa40.51■■■■■ 4.08
SRPK1-210ENST00000508473 TTBK1Q5TCY1 1321 aaPredicted RBP40.47■■■■■ 4.07
SRPK1-210ENST00000508473 CARMIL2Q6F5E8 1435 aa40.45■■■■■ 4.07
SRPK1-210ENST00000508473 FAM9AQ8IZU1 332 aaPredicted RBP40.44■■■■■ 4.06
SRPK1-210ENST00000508473 PTPRGP23470 1445 aa40.39■■■■■ 4.06
SRPK1-210ENST00000508473 EEA1Q15075 1411 aa40.39■■■■■ 4.06
SRPK1-210ENST00000508473 TNIKQ9UKE5 1360 aa40.36■■■■■ 4.05
SRPK1-210ENST00000508473 DISP1Q96F81 1524 aa40.35■■■■■ 4.05
SRPK1-210ENST00000508473 UGGT2Q9NYU1 1516 aa40.35■■■■■ 4.05
SRPK1-210ENST00000508473 CTTNBP2Q8WZ74 1663 aa40.31■■■■■ 4.04
SRPK1-210ENST00000508473 NPM1P06748 294 aaKnown RBP eCLIP40.28■■■■■ 4.04
SRPK1-210ENST00000508473 ADCY10Q96PN6 1610 aa40.27■■■■■ 4.04
SRPK1-210ENST00000508473 KIAA0556O60303 1618 aa40.2■■■■■ 4.03
SRPK1-210ENST00000508473 GOLGA3Q08378 1498 aa40.11■■■■■ 4.01
SRPK1-210ENST00000508473 UACAQ9BZF9 1416 aa40.08■■■■■ 4.01
SRPK1-210ENST00000508473 MAPKBP1O60336 1514 aa40.04■■■■■ 4
SRPK1-210ENST00000508473 ABCC2Q92887 1545 aa40.01■■■■■ 4
SRPK1-210ENST00000508473 UHRF1BP1LA0JNW5 1464 aa40.01■■■■■ 4
SRPK1-210ENST00000508473 EHMT2Q96KQ7 1210 aa40.01■■■■■ 4
SRPK1-210ENST00000508473 P3H3Q8IVL6 736 aa40■■■■□ 3.99
SRPK1-210ENST00000508473 KIF21BO75037 1637 aa39.99■■■■□ 3.99
SRPK1-210ENST00000508473 RANGAP1P46060 587 aaPredicted RBP39.98■■■■□ 3.99
SRPK1-210ENST00000508473 FAM69CQ0P6D2 419 aa39.97■■■■□ 3.99
SRPK1-210ENST00000508473 ABCC10Q5T3U5 1492 aa39.94■■■■□ 3.98
SRPK1-210ENST00000508473 KIF13AQ9H1H9 1805 aa39.91■■■■□ 3.98
SRPK1-210ENST00000508473 PLB1Q6P1J6 1458 aa39.91■■■■□ 3.98
SRPK1-210ENST00000508473 DIP2BQ9P265 1576 aa39.84■■■■□ 3.97
SRPK1-210ENST00000508473 ASXL2Q76L83 1435 aa39.83■■■■□ 3.97
SRPK1-210ENST00000508473 KDM5BQ9UGL1 1544 aa39.83■■■■□ 3.97
SRPK1-210ENST00000508473 UBTFP17480 764 aaKnown RBP39.83■■■■□ 3.97
SRPK1-210ENST00000508473 SAMD9Q5K651 1589 aa39.81■■■■□ 3.96
SRPK1-210ENST00000508473 ABCA8O94911 1581 aa39.79■■■■□ 3.96
SRPK1-210ENST00000508473 ZCCHC11Q5TAX3 1644 aaKnown RBP39.75■■■■□ 3.95
SRPK1-210ENST00000508473 FHOD3Q2V2M9 1422 aa39.69■■■■□ 3.94
SRPK1-210ENST00000508473 ARID3CA6NKF2 412 aa39.67■■■■□ 3.94
SRPK1-210ENST00000508473 EFCAB5A4FU69 1503 aa39.58■■■■□ 3.93
SRPK1-210ENST00000508473 EPRSP07814 1512 aaKnown RBP39.57■■■■□ 3.93
SRPK1-210ENST00000508473 WDR7Q9Y4E6 1490 aa39.56■■■■□ 3.92
SRPK1-210ENST00000508473 TSPOAP1O95153 1857 aa39.55■■■■□ 3.92
SRPK1-210ENST00000508473 GLI2P10070 1586 aa39.55■■■■□ 3.92
SRPK1-210ENST00000508473 RAPGEF6Q8TEU7 1601 aa39.51■■■■□ 3.92
SRPK1-210ENST00000508473 ATP10BO94823 1461 aa39.5■■■■□ 3.91
SRPK1-210ENST00000508473 KCNH8Q96L42 1107 aa39.49■■■■□ 3.91
SRPK1-210ENST00000508473 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.43■■■■□ 3.9
SRPK1-210ENST00000508473 HNRNPUL2Q1KMD3 747 aaKnown RBP39.43■■■■□ 3.9
SRPK1-210ENST00000508473 ARHGAP35Q9NRY4 1499 aa39.42■■■■□ 3.9
SRPK1-210ENST00000508473 NUP153P49790 1475 aaKnown RBP39.41■■■■□ 3.9
SRPK1-210ENST00000508473 MAP3K4Q9Y6R4 1608 aa39.35■■■■□ 3.89
SRPK1-210ENST00000508473 PPRC1Q5VV67 1664 aaKnown RBP39.34■■■■□ 3.89
SRPK1-210ENST00000508473 KDM6BO15054 1643 aa39.29■■■■□ 3.88
SRPK1-210ENST00000508473 FMN1Q68DA7 1419 aa39.26■■■■□ 3.88
SRPK1-210ENST00000508473 CD109Q6YHK3 1445 aa39.25■■■■□ 3.87
SRPK1-210ENST00000508473 ATP1B4Q9UN42 357 aaPredicted RBP39.25■■■■□ 3.87
SRPK1-210ENST00000508473 TEX14Q8IWB6 1497 aa39.22■■■■□ 3.87
SRPK1-210ENST00000508473 CFAP43Q8NDM7 1665 aa39.17■■■■□ 3.86
SRPK1-210ENST00000508473 PLEKHD1A6NEE1 506 aa39.17■■■■□ 3.86
SRPK1-210ENST00000508473 CDK13Q14004 1512 aaKnown RBP39.14■■■■□ 3.86
SRPK1-210ENST00000508473 MAGI3Q5TCQ9 1506 aa39.13■■■■□ 3.85
SRPK1-210ENST00000508473 COL17A1Q9UMD9 1497 aaPredicted RBP39.11■■■■□ 3.85
SRPK1-210ENST00000508473 CLIP1P30622 1438 aa39.1■■■■□ 3.85
SRPK1-210ENST00000508473 HECW1Q76N89 1606 aa39.08■■■■□ 3.85
SRPK1-210ENST00000508473 ABCA9Q8IUA7 1624 aa39.05■■■■□ 3.84
SRPK1-210ENST00000508473 LOC105371045A0A1W2PR82 267 aa38.94■■■■□ 3.82
SRPK1-210ENST00000508473 PCF11O94913 1555 aaKnown RBP38.93■■■■□ 3.82
SRPK1-210ENST00000508473 CASKIN1Q8WXD9 1431 aa38.93■■■■□ 3.82
SRPK1-210ENST00000508473 AEBP2Q6ZN18 517 aaPredicted RBP38.92■■■■□ 3.82
SRPK1-210ENST00000508473 CDK11AQ9UQ88 783 aaPredicted RBP38.92■■■■□ 3.82
SRPK1-210ENST00000508473 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.89■■■■□ 3.824e-6■■■□□ 17.3
SRPK1-210ENST00000508473 CEP162Q5TB80 1403 aa38.86■■■■□ 3.81
SRPK1-210ENST00000508473 LRRIQ1Q96JM4 1722 aa38.85■■■■□ 3.81
SRPK1-210ENST00000508473 TTC37Q6PGP7 1564 aa38.82■■■■□ 3.81
SRPK1-210ENST00000508473 PHLDB1Q86UU1 1377 aa38.8■■■■□ 3.8
SRPK1-210ENST00000508473 NEO1Q92859 1461 aa38.79■■■■□ 3.8
SRPK1-210ENST00000508473 FYCO1Q9BQS8 1478 aa38.79■■■■□ 3.8
SRPK1-210ENST00000508473 ARAP3Q8WWN8 1544 aa38.79■■■■□ 3.8
SRPK1-210ENST00000508473 TROQ12816 1431 aaPredicted RBP38.79■■■■□ 3.8
SRPK1-210ENST00000508473 CCDC18Q5T9S5 1454 aa38.78■■■■□ 3.8
SRPK1-210ENST00000508473 RAPGEF3O95398 923 aa38.72■■■■□ 3.79
SRPK1-210ENST00000508473 FANCAO15360 1455 aa38.71■■■■□ 3.79
SRPK1-210ENST00000508473 KIF14Q15058 1648 aa38.71■■■■□ 3.79
SRPK1-210ENST00000508473 AKNAQ7Z591 1439 aa38.67■■■■□ 3.78
SRPK1-210ENST00000508473 PLCH2O75038 1416 aa38.66■■■■□ 3.78
SRPK1-210ENST00000508473 KDM4FA0A1W2PPD8 638 aa38.63■■■■□ 3.77
SRPK1-210ENST00000508473 CFAP74Q9C0B2 1584 aa38.59■■■■□ 3.77
SRPK1-210ENST00000508473 DENND4BO75064 1496 aaPredicted RBP38.57■■■■□ 3.76
SRPK1-210ENST00000508473 EFCAB2Q5VUJ9 269 aa38.56■■■■□ 3.76
SRPK1-210ENST00000508473 MYO5CQ9NQX4 1742 aa38.54■■■■□ 3.76
SRPK1-210ENST00000508473 FRMPD1Q5SYB0 1578 aa38.53■■■■□ 3.76
SRPK1-210ENST00000508473 ADGRL1O94910 1474 aa38.5■■■■□ 3.75
SRPK1-210ENST00000508473 ARHGAP5Q13017 1502 aa38.48■■■■□ 3.75
SRPK1-210ENST00000508473 SCAPERQ9BY12 1400 aa38.48■■■■□ 3.75
SRPK1-210ENST00000508473 MTUS2Q5JR59 1369 aa38.44■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms