RNA–Protein interactions for RNA: ENST00000508382.1

SGCA-206, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-206ENST00000508382 TSPOAP1O95153 1857 aa24.13■■□□□ 1.45
SGCA-206ENST00000508382 FHAD1B1AJZ9 1412 aa24.11■■□□□ 1.45
SGCA-206ENST00000508382 ADCY10Q96PN6 1610 aa24.09■■□□□ 1.45
SGCA-206ENST00000508382 JPH4Q96JJ6 628 aa24.02■■□□□ 1.44
SGCA-206ENST00000508382 ERICH3Q5RHP9 1530 aa24.01■■□□□ 1.43
SGCA-206ENST00000508382 RUSC2Q8N2Y8 1516 aa24.01■■□□□ 1.43
SGCA-206ENST00000508382 WRNQ14191 1432 aaPredicted RBP eCLIP24.01■■□□□ 1.43
SGCA-206ENST00000508382 BIVM-ERCC5R4GMW8 1640 aa23.99■■□□□ 1.43
SGCA-206ENST00000508382 TOP2BQ02880 1626 aa23.94■■□□□ 1.42
SGCA-206ENST00000508382 NPM1P06748 294 aaKnown RBP eCLIP23.93■■□□□ 1.42
SGCA-206ENST00000508382 ADGRL1O94910 1474 aa23.91■■□□□ 1.42
SGCA-206ENST00000508382 PPRC1Q5VV67 1664 aaKnown RBP23.91■■□□□ 1.42
SGCA-206ENST00000508382 HECW2Q9P2P5 1572 aa23.9■■□□□ 1.42
SGCA-206ENST00000508382 COL17A1Q9UMD9 1497 aaPredicted RBP23.75■■□□□ 1.39
SGCA-206ENST00000508382 GLI2P10070 1586 aa23.72■■□□□ 1.39
SGCA-206ENST00000508382 KIAA0586Q9BVV6 1533 aa23.69■■□□□ 1.38
SGCA-206ENST00000508382 CUL7Q14999 1698 aa23.67■■□□□ 1.38
SGCA-206ENST00000508382 ASXL2Q76L83 1435 aa23.66■■□□□ 1.38
SGCA-206ENST00000508382 ABCC2Q92887 1545 aa23.64■■□□□ 1.38
SGCA-206ENST00000508382 MAP3K4Q9Y6R4 1608 aa23.62■■□□□ 1.37
SGCA-206ENST00000508382 PTPRGP23470 1445 aa23.61■■□□□ 1.37
SGCA-206ENST00000508382 PLB1Q6P1J6 1458 aa23.59■■□□□ 1.37
SGCA-206ENST00000508382 TTBK1Q5TCY1 1321 aaPredicted RBP23.58■■□□□ 1.36
SGCA-206ENST00000508382 FBXO41Q8TF61 875 aa23.53■■□□□ 1.36
SGCA-206ENST00000508382 EPRSP07814 1512 aaKnown RBP23.53■■□□□ 1.36
SGCA-206ENST00000508382 IGF1RP08069 1367 aa23.52■■□□□ 1.36
SGCA-206ENST00000508382 UHRF1BP1LA0JNW5 1464 aa23.5■■□□□ 1.35
SGCA-206ENST00000508382 TNIKQ9UKE5 1360 aa23.5■■□□□ 1.35
SGCA-206ENST00000508382 TEX14Q8IWB6 1497 aa23.45■■□□□ 1.34
SGCA-206ENST00000508382 ZCCHC11Q5TAX3 1644 aaKnown RBP23.44■■□□□ 1.34
SGCA-206ENST00000508382 UACAQ9BZF9 1416 aa23.43■■□□□ 1.34
SGCA-206ENST00000508382 KDM5BQ9UGL1 1544 aa23.43■■□□□ 1.34
SGCA-206ENST00000508382 SUPT5HO00267 1087 aaKnown RBP23.42■■□□□ 1.34
SGCA-206ENST00000508382 CARMIL2Q6F5E8 1435 aa23.41■■□□□ 1.34
SGCA-206ENST00000508382 KIF21BO75037 1637 aa23.39■■□□□ 1.33
SGCA-206ENST00000508382 DISP1Q96F81 1524 aa23.38■■□□□ 1.33
SGCA-206ENST00000508382 IQGAP2Q13576 1575 aa23.38■■□□□ 1.33
SGCA-206ENST00000508382 KIF27Q86VH2 1401 aa23.33■■□□□ 1.33
SGCA-206ENST00000508382 CARMIL1Q5VZK9 1371 aa23.29■■□□□ 1.32
SGCA-206ENST00000508382 WDR7Q9Y4E6 1490 aa23.27■■□□□ 1.32
SGCA-206ENST00000508382 CFAP43Q8NDM7 1665 aa23.26■■□□□ 1.31
SGCA-206ENST00000508382 MAGI3Q5TCQ9 1506 aa23.24■■□□□ 1.31
SGCA-206ENST00000508382 ADAMTSL3P82987 1691 aa23.23■■□□□ 1.31
SGCA-206ENST00000508382 KIAA0556O60303 1618 aa23.22■■□□□ 1.31
SGCA-206ENST00000508382 UGGT2Q9NYU1 1516 aa23.21■■□□□ 1.31
SGCA-206ENST00000508382 PTPRMP28827 1452 aa23.2■■□□□ 1.3
SGCA-206ENST00000508382 CD109Q6YHK3 1445 aa23.2■■□□□ 1.3
SGCA-206ENST00000508382 LMTK3Q96Q04 1460 aa23.17■■□□□ 1.3
SGCA-206ENST00000508382 PCF11O94913 1555 aaKnown RBP23.13■■□□□ 1.29
SGCA-206ENST00000508382 ARAP3Q8WWN8 1544 aa23.1■■□□□ 1.29
SGCA-206ENST00000508382 KCNH8Q96L42 1107 aa23.1■■□□□ 1.29
SGCA-206ENST00000508382 MADDQ8WXG6 1647 aa23.08■■□□□ 1.29
SGCA-206ENST00000508382 BCORL1Q5H9F3 1711 aa23.08■■□□□ 1.29
SGCA-206ENST00000508382 ABCA8O94911 1581 aa23.07■■□□□ 1.28
SGCA-206ENST00000508382 ILDR2Q71H61 639 aa23.05■■□□□ 1.28
SGCA-206ENST00000508382 RAPGEF2Q9Y4G8 1499 aa22.99■■□□□ 1.27
SGCA-206ENST00000508382 RIMS1Q86UR5 1692 aaKnown RBP22.98■■□□□ 1.27
SGCA-206ENST00000508382 FRMPD1Q5SYB0 1578 aa22.97■■□□□ 1.27
SGCA-206ENST00000508382 CTTNBP2Q8WZ74 1663 aa22.97■■□□□ 1.27
SGCA-206ENST00000508382 RAPGEF3O95398 923 aa22.94■■□□□ 1.26
SGCA-206ENST00000508382 HSPA2P54652 639 aa22.94■■□□□ 1.26
SGCA-206ENST00000508382 ABCA9Q8IUA7 1624 aa22.93■■□□□ 1.26
SGCA-206ENST00000508382 SOCS7O14512 581 aa22.93■■□□□ 1.26
SGCA-206ENST00000508382 CERKQ8TCT0 537 aa22.91■■□□□ 1.26
SGCA-206ENST00000508382 DISP3Q9P2K9 1392 aa22.88■■□□□ 1.25
SGCA-206ENST00000508382 SIGLEC1Q9BZZ2 1709 aa22.87■■□□□ 1.25
SGCA-206ENST00000508382 ARID3CA6NKF2 412 aa22.84■■□□□ 1.25
SGCA-206ENST00000508382 ATP10BO94823 1461 aa22.84■■□□□ 1.25
SGCA-206ENST00000508382 GOLGA3Q08378 1498 aa22.84■■□□□ 1.25
SGCA-206ENST00000508382 ARID4BQ4LE39 1312 aaPredicted RBP22.83■■□□□ 1.25
SGCA-206ENST00000508382 PHLDB1Q86UU1 1377 aa22.83■■□□□ 1.25
SGCA-206ENST00000508382 ARHGEF40Q8TER5 1519 aa22.82■■□□□ 1.24
SGCA-206ENST00000508382 NEO1Q92859 1461 aa22.81■■□□□ 1.24
SGCA-206ENST00000508382 RICTORQ6R327 1708 aa22.79■■□□□ 1.24
SGCA-206ENST00000508382 PLPPR3Q6T4P5 718 aa22.76■■□□□ 1.23
SGCA-206ENST00000508382 SPATA31D1Q6ZQQ2 1576 aa22.74■■□□□ 1.23
SGCA-206ENST00000508382 FER1L4A9Z1Z3 1794 aa22.71■■□□□ 1.23
SGCA-206ENST00000508382 STRCQ7RTU9 1775 aa22.71■■□□□ 1.23
SGCA-206ENST00000508382 TTC37Q6PGP7 1564 aa22.67■■□□□ 1.22
SGCA-206ENST00000508382 PREX1Q8TCU6 1659 aa22.65■■□□□ 1.22
SGCA-206ENST00000508382 RAPGEF6Q8TEU7 1601 aa22.64■■□□□ 1.22
SGCA-206ENST00000508382 P3H3Q8IVL6 736 aa22.64■■□□□ 1.21
SGCA-206ENST00000508382 DENND4BO75064 1496 aaPredicted RBP22.64■■□□□ 1.21
SGCA-206ENST00000508382 YEATS2Q9ULM3 1422 aa22.64■■□□□ 1.21
SGCA-206ENST00000508382 ZMYM4Q5VZL5 1548 aa22.63■■□□□ 1.21
SGCA-206ENST00000508382 FANCAO15360 1455 aa22.63■■□□□ 1.21
SGCA-206ENST00000508382 FHOD3Q2V2M9 1422 aa22.63■■□□□ 1.21
SGCA-206ENST00000508382 ZFYVE16Q7Z3T8 1539 aa22.6■■□□□ 1.21
SGCA-206ENST00000508382 POGZQ7Z3K3 1410 aa22.59■■□□□ 1.21
SGCA-206ENST00000508382 AKNAQ7Z591 1439 aa22.59■■□□□ 1.21
SGCA-206ENST00000508382 PRXQ9BXM0 1461 aa22.59■■□□□ 1.21
SGCA-206ENST00000508382 SAMD9Q5K651 1589 aa22.58■■□□□ 1.2
SGCA-206ENST00000508382 MLECQ14165 292 aa22.57■■□□□ 1.2
SGCA-206ENST00000508382 HECW1Q76N89 1606 aa22.56■■□□□ 1.2
SGCA-206ENST00000508382 EFCAB5A4FU69 1503 aa22.56■■□□□ 1.2
SGCA-206ENST00000508382 NUP153P49790 1475 aaKnown RBP22.55■■□□□ 1.2
SGCA-206ENST00000508382 CFAP74Q9C0B2 1584 aa22.55■■□□□ 1.2
SGCA-206ENST00000508382 ARHGEF12Q9NZN5 1544 aa22.54■■□□□ 1.2
SGCA-206ENST00000508382 CHIC1Q5VXU3 224 aa22.53■■□□□ 1.2
SGCA-206ENST00000508382 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms