RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 JPH4Q96JJ6 628 aa33.69■■■□□ 2.98
SFXN1-209ENST00000508290 PRG4Q92954 1404 aaPredicted RBP33.63■■■□□ 2.97
SFXN1-209ENST00000508290 ERCC6L2Q5T890 1561 aa33.61■■■□□ 2.97
SFXN1-209ENST00000508290 RAPGEF2Q9Y4G8 1499 aa33.61■■■□□ 2.97
SFXN1-209ENST00000508290 IQGAP2Q13576 1575 aa33.46■■■□□ 2.95
SFXN1-209ENST00000508290 EEA1Q15075 1411 aa33.45■■■□□ 2.95
SFXN1-209ENST00000508290 PRXQ9BXM0 1461 aa33.43■■■□□ 2.94
SFXN1-209ENST00000508290 CARMIL2Q6F5E8 1435 aa33.4■■■□□ 2.94
SFXN1-209ENST00000508290 CSRNP3Q8WYN3 585 aa33.32■■■□□ 2.92
SFXN1-209ENST00000508290 TRHP20396 242 aaPredicted RBP33.31■■■□□ 2.92
SFXN1-209ENST00000508290 UGGT2Q9NYU1 1516 aa33.29■■■□□ 2.92
SFXN1-209ENST00000508290 TNIKQ9UKE5 1360 aa33.27■■■□□ 2.92
SFXN1-209ENST00000508290 PTPRGP23470 1445 aa33.24■■■□□ 2.91
SFXN1-209ENST00000508290 CHIC1Q5VXU3 224 aa33.23■■■□□ 2.91
SFXN1-209ENST00000508290 CTTNBP2Q8WZ74 1663 aa33.23■■■□□ 2.91
SFXN1-209ENST00000508290 DISP1Q96F81 1524 aa33.2■■■□□ 2.91
SFXN1-209ENST00000508290 NPM1P06748 294 aaKnown RBP eCLIP33.18■■■□□ 2.9
SFXN1-209ENST00000508290 GOLGA3Q08378 1498 aa33.16■■■□□ 2.9
SFXN1-209ENST00000508290 KIAA0556O60303 1618 aa33.12■■■□□ 2.89
SFXN1-209ENST00000508290 ADCY10Q96PN6 1610 aa33.12■■■□□ 2.89
SFXN1-209ENST00000508290 MAPKBP1O60336 1514 aa33.07■■■□□ 2.89
SFXN1-209ENST00000508290 UHRF1BP1LA0JNW5 1464 aa33.05■■■□□ 2.88
SFXN1-209ENST00000508290 KIF21BO75037 1637 aa33.02■■■□□ 2.88
SFXN1-209ENST00000508290 UACAQ9BZF9 1416 aa33.02■■■□□ 2.88
SFXN1-209ENST00000508290 ABCC2Q92887 1545 aa32.99■■■□□ 2.87
SFXN1-209ENST00000508290 FAM9AQ8IZU1 332 aaPredicted RBP32.99■■■□□ 2.87
SFXN1-209ENST00000508290 TTBK1Q5TCY1 1321 aaPredicted RBP32.98■■■□□ 2.87
SFXN1-209ENST00000508290 ABCC10Q5T3U5 1492 aa32.92■■■□□ 2.86
SFXN1-209ENST00000508290 KDM5BQ9UGL1 1544 aa32.86■■■□□ 2.85
SFXN1-209ENST00000508290 SAMD9Q5K651 1589 aa32.83■■■□□ 2.85
SFXN1-209ENST00000508290 PLB1Q6P1J6 1458 aa32.83■■■□□ 2.85
SFXN1-209ENST00000508290 DIP2BQ9P265 1576 aa32.81■■■□□ 2.84
SFXN1-209ENST00000508290 KIF13AQ9H1H9 1805 aa32.8■■■□□ 2.84
SFXN1-209ENST00000508290 FAM69CQ0P6D2 419 aa32.8■■■□□ 2.84
SFXN1-209ENST00000508290 ABCA8O94911 1581 aa32.78■■■□□ 2.84
SFXN1-209ENST00000508290 ASXL2Q76L83 1435 aa32.76■■■□□ 2.83
SFXN1-209ENST00000508290 EFCAB5A4FU69 1503 aa32.73■■■□□ 2.83
SFXN1-209ENST00000508290 ZCCHC11Q5TAX3 1644 aaKnown RBP32.7■■■□□ 2.83
SFXN1-209ENST00000508290 UBTFP17480 764 aaKnown RBP32.69■■■□□ 2.82
SFXN1-209ENST00000508290 P3H3Q8IVL6 736 aa32.67■■■□□ 2.82
SFXN1-209ENST00000508290 GLI2P10070 1586 aa32.66■■■□□ 2.82
SFXN1-209ENST00000508290 WDR7Q9Y4E6 1490 aa32.6■■■□□ 2.81
SFXN1-209ENST00000508290 EPRSP07814 1512 aaKnown RBP32.57■■■□□ 2.8
SFXN1-209ENST00000508290 FHOD3Q2V2M9 1422 aa32.57■■■□□ 2.8
SFXN1-209ENST00000508290 RANGAP1P46060 587 aaPredicted RBP32.56■■■□□ 2.8
SFXN1-209ENST00000508290 RAPGEF6Q8TEU7 1601 aa32.55■■■□□ 2.8
SFXN1-209ENST00000508290 ATP10BO94823 1461 aa32.48■■■□□ 2.79
SFXN1-209ENST00000508290 EHMT2Q96KQ7 1210 aa32.48■■■□□ 2.79
SFXN1-209ENST00000508290 FMN1Q68DA7 1419 aa32.44■■■□□ 2.78
SFXN1-209ENST00000508290 MAP3K4Q9Y6R4 1608 aa32.44■■■□□ 2.78
SFXN1-209ENST00000508290 NUP153P49790 1475 aaKnown RBP32.43■■■□□ 2.78
SFXN1-209ENST00000508290 TEX14Q8IWB6 1497 aa32.42■■■□□ 2.78
SFXN1-209ENST00000508290 ARHGAP35Q9NRY4 1499 aa32.42■■■□□ 2.78
SFXN1-209ENST00000508290 TSPOAP1O95153 1857 aa32.37■■■□□ 2.77
SFXN1-209ENST00000508290 KDM6BO15054 1643 aa32.36■■■□□ 2.77
SFXN1-209ENST00000508290 CFAP43Q8NDM7 1665 aa32.34■■■□□ 2.77
SFXN1-209ENST00000508290 ARID3CA6NKF2 412 aa32.33■■■□□ 2.77
SFXN1-209ENST00000508290 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.33■■■□□ 2.77
SFXN1-209ENST00000508290 HNRNPUL2Q1KMD3 747 aaKnown RBP32.33■■■□□ 2.77
SFXN1-209ENST00000508290 PPRC1Q5VV67 1664 aaKnown RBP32.33■■■□□ 2.77
SFXN1-209ENST00000508290 KCNH8Q96L42 1107 aa32.32■■■□□ 2.76
SFXN1-209ENST00000508290 CD109Q6YHK3 1445 aa32.31■■■□□ 2.76
SFXN1-209ENST00000508290 MAGI3Q5TCQ9 1506 aa32.31■■■□□ 2.76
SFXN1-209ENST00000508290 HECW1Q76N89 1606 aa32.26■■■□□ 2.75
SFXN1-209ENST00000508290 PLEKHD1A6NEE1 506 aa32.25■■■□□ 2.75
SFXN1-209ENST00000508290 ABCA9Q8IUA7 1624 aa32.22■■■□□ 2.75
SFXN1-209ENST00000508290 CLIP1P30622 1438 aa32.19■■■□□ 2.74
SFXN1-209ENST00000508290 CDK11AQ9UQ88 783 aaPredicted RBP32.15■■■□□ 2.74
SFXN1-209ENST00000508290 PHLDB1Q86UU1 1377 aa32.15■■■□□ 2.74
SFXN1-209ENST00000508290 CDK13Q14004 1512 aaKnown RBP32.11■■■□□ 2.73
SFXN1-209ENST00000508290 CASKIN1Q8WXD9 1431 aa32.11■■■□□ 2.73
SFXN1-209ENST00000508290 ATP1B4Q9UN42 357 aaPredicted RBP32.11■■■□□ 2.73
SFXN1-209ENST00000508290 CCDC18Q5T9S5 1454 aa32.06■■■□□ 2.72
SFXN1-209ENST00000508290 COL17A1Q9UMD9 1497 aaPredicted RBP32.05■■■□□ 2.72
SFXN1-209ENST00000508290 NEO1Q92859 1461 aa32.04■■■□□ 2.72
SFXN1-209ENST00000508290 FYCO1Q9BQS8 1478 aa32.04■■■□□ 2.72
SFXN1-209ENST00000508290 ARAP3Q8WWN8 1544 aa32.03■■■□□ 2.72
SFXN1-209ENST00000508290 PCF11O94913 1555 aaKnown RBP32.01■■■□□ 2.71
SFXN1-209ENST00000508290 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32■■■□□ 2.71
SFXN1-209ENST00000508290 TROQ12816 1431 aaPredicted RBP31.97■■■□□ 2.71
SFXN1-209ENST00000508290 CEP162Q5TB80 1403 aa31.97■■■□□ 2.71
SFXN1-209ENST00000508290 CFAP74Q9C0B2 1584 aa31.94■■■□□ 2.7
SFXN1-209ENST00000508290 TTC37Q6PGP7 1564 aa31.91■■■□□ 2.7
SFXN1-209ENST00000508290 KIF14Q15058 1648 aa31.91■■■□□ 2.7
SFXN1-209ENST00000508290 FANCAO15360 1455 aa31.89■■■□□ 2.7
SFXN1-209ENST00000508290 LRRIQ1Q96JM4 1722 aa31.88■■■□□ 2.69
SFXN1-209ENST00000508290 PLCH2O75038 1416 aa31.86■■■□□ 2.69
SFXN1-209ENST00000508290 AEBP2Q6ZN18 517 aaPredicted RBP31.84■■■□□ 2.69
SFXN1-209ENST00000508290 AKNAQ7Z591 1439 aa31.83■■■□□ 2.69
SFXN1-209ENST00000508290 DENND4BO75064 1496 aaPredicted RBP31.78■■■□□ 2.68
SFXN1-209ENST00000508290 MYO5CQ9NQX4 1742 aa31.78■■■□□ 2.68
SFXN1-209ENST00000508290 LOC105371045A0A1W2PR82 267 aa31.77■■■□□ 2.68
SFXN1-209ENST00000508290 EFCAB2Q5VUJ9 269 aa31.76■■■□□ 2.67
SFXN1-209ENST00000508290 RAPGEF3O95398 923 aa31.72■■■□□ 2.67
SFXN1-209ENST00000508290 ADGRL1O94910 1474 aa31.71■■■□□ 2.67
SFXN1-209ENST00000508290 FRMPD1Q5SYB0 1578 aa31.68■■■□□ 2.66
SFXN1-209ENST00000508290 ARHGAP5Q13017 1502 aa31.67■■■□□ 2.66
SFXN1-209ENST00000508290 MTUS2Q5JR59 1369 aa31.66■■■□□ 2.66
SFXN1-209ENST00000508290 RICTORQ6R327 1708 aa31.65■■■□□ 2.66
SFXN1-209ENST00000508290 VPS8Q8N3P4 1428 aa31.65■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms