RNA–Protein interactions for RNA: ENST00000508063.1

PTPN13-207, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-207ENST00000508063 SHROOM2Q13796 1616 aa19.24■□□□□ 0.67
PTPN13-207ENST00000508063 KIF27Q86VH2 1401 aa19.24■□□□□ 0.67
PTPN13-207ENST00000508063 ERCC6L2Q5T890 1561 aa19.2■□□□□ 0.66
PTPN13-207ENST00000508063 CUL7Q14999 1698 aa19.17■□□□□ 0.66
PTPN13-207ENST00000508063 JPH4Q96JJ6 628 aa19.17■□□□□ 0.66
PTPN13-207ENST00000508063 IGF1RP08069 1367 aa19.17■□□□□ 0.66
PTPN13-207ENST00000508063 PRG4Q92954 1404 aaPredicted RBP19.15■□□□□ 0.66
PTPN13-207ENST00000508063 RUSC2Q8N2Y8 1516 aa19.15■□□□□ 0.66
PTPN13-207ENST00000508063 KIAA0586Q9BVV6 1533 aa19.09■□□□□ 0.65
PTPN13-207ENST00000508063 CARMIL1Q5VZK9 1371 aa19.06■□□□□ 0.64
PTPN13-207ENST00000508063 NPM1P06748 294 aaKnown RBP eCLIP18.98■□□□□ 0.63
PTPN13-207ENST00000508063 PPP6R1Q9UPN7 881 aa18.94■□□□□ 0.62
PTPN13-207ENST00000508063 CARMIL2Q6F5E8 1435 aa18.93■□□□□ 0.62
PTPN13-207ENST00000508063 IQGAP2Q13576 1575 aa18.92■□□□□ 0.62
PTPN13-207ENST00000508063 RAPGEF2Q9Y4G8 1499 aa18.91■□□□□ 0.62
PTPN13-207ENST00000508063 ADRA2BP18089 450 aa18.91■□□□□ 0.62
PTPN13-207ENST00000508063 ADCY10Q96PN6 1610 aa18.89■□□□□ 0.62
PTPN13-207ENST00000508063 PTPRGP23470 1445 aa18.89■□□□□ 0.61
PTPN13-207ENST00000508063 MAPKBP1O60336 1514 aa18.88■□□□□ 0.61
PTPN13-207ENST00000508063 KIF13AQ9H1H9 1805 aa18.87■□□□□ 0.61
PTPN13-207ENST00000508063 TNIKQ9UKE5 1360 aa18.87■□□□□ 0.61
PTPN13-207ENST00000508063 ABCC10Q5T3U5 1492 aa18.84■□□□□ 0.61
PTPN13-207ENST00000508063 FAM69CQ0P6D2 419 aa18.82■□□□□ 0.6
PTPN13-207ENST00000508063 TTBK1Q5TCY1 1321 aaPredicted RBP18.81■□□□□ 0.6
PTPN13-207ENST00000508063 UGGT2Q9NYU1 1516 aa18.8■□□□□ 0.6
PTPN13-207ENST00000508063 DISP1Q96F81 1524 aa18.79■□□□□ 0.6
PTPN13-207ENST00000508063 DIP2BQ9P265 1576 aa18.78■□□□□ 0.6
PTPN13-207ENST00000508063 ABCC2Q92887 1545 aa18.76■□□□□ 0.59
PTPN13-207ENST00000508063 UHRF1BP1LA0JNW5 1464 aa18.76■□□□□ 0.59
PTPN13-207ENST00000508063 CTTNBP2Q8WZ74 1663 aa18.76■□□□□ 0.59
PTPN13-207ENST00000508063 UACAQ9BZF9 1416 aa18.74■□□□□ 0.59
PTPN13-207ENST00000508063 PRXQ9BXM0 1461 aa18.73■□□□□ 0.59
PTPN13-207ENST00000508063 KIAA0556O60303 1618 aa18.73■□□□□ 0.59
PTPN13-207ENST00000508063 GOLGA3Q08378 1498 aa18.71■□□□□ 0.59
PTPN13-207ENST00000508063 PLB1Q6P1J6 1458 aa18.7■□□□□ 0.58
PTPN13-207ENST00000508063 ASXL2Q76L83 1435 aa18.67■□□□□ 0.58
PTPN13-207ENST00000508063 KDM5BQ9UGL1 1544 aa18.65■□□□□ 0.58
PTPN13-207ENST00000508063 CSRNP3Q8WYN3 585 aa18.65■□□□□ 0.58
PTPN13-207ENST00000508063 TSPOAP1O95153 1857 aa18.65■□□□□ 0.58
PTPN13-207ENST00000508063 FAM9AQ8IZU1 332 aaPredicted RBP18.64■□□□□ 0.57
PTPN13-207ENST00000508063 EEA1Q15075 1411 aa18.64■□□□□ 0.57
PTPN13-207ENST00000508063 PIAS4Q8N2W9 510 aaPredicted RBP18.63■□□□□ 0.57
PTPN13-207ENST00000508063 GLI2P10070 1586 aa18.63■□□□□ 0.57
PTPN13-207ENST00000508063 ZCCHC11Q5TAX3 1644 aaKnown RBP18.61■□□□□ 0.57
PTPN13-207ENST00000508063 KDM6BO15054 1643 aa18.6■□□□□ 0.57
PTPN13-207ENST00000508063 EPRSP07814 1512 aaKnown RBP18.56■□□□□ 0.56
PTPN13-207ENST00000508063 ABCA8O94911 1581 aa18.55■□□□□ 0.56
PTPN13-207ENST00000508063 WDR7Q9Y4E6 1490 aa18.52■□□□□ 0.56
PTPN13-207ENST00000508063 MAP3K4Q9Y6R4 1608 aa18.51■□□□□ 0.55
PTPN13-207ENST00000508063 PPRC1Q5VV67 1664 aaKnown RBP18.5■□□□□ 0.55
PTPN13-207ENST00000508063 TEX14Q8IWB6 1497 aa18.5■□□□□ 0.55
PTPN13-207ENST00000508063 P3H3Q8IVL6 736 aa18.48■□□□□ 0.55
PTPN13-207ENST00000508063 SAMD9Q5K651 1589 aa18.47■□□□□ 0.55
PTPN13-207ENST00000508063 KIF21BO75037 1637 aa18.43■□□□□ 0.54
PTPN13-207ENST00000508063 KCNH8Q96L42 1107 aa18.43■□□□□ 0.54
PTPN13-207ENST00000508063 CFAP43Q8NDM7 1665 aa18.42■□□□□ 0.54
PTPN13-207ENST00000508063 CD109Q6YHK3 1445 aa18.4■□□□□ 0.54
PTPN13-207ENST00000508063 ATP10BO94823 1461 aa18.39■□□□□ 0.54
PTPN13-207ENST00000508063 RAPGEF6Q8TEU7 1601 aa18.39■□□□□ 0.53
PTPN13-207ENST00000508063 MAGI3Q5TCQ9 1506 aa18.39■□□□□ 0.53
PTPN13-207ENST00000508063 RANGAP1P46060 587 aaPredicted RBP18.38■□□□□ 0.53
PTPN13-207ENST00000508063 EFCAB5A4FU69 1503 aa18.36■□□□□ 0.53
PTPN13-207ENST00000508063 ARID3CA6NKF2 412 aa18.36■□□□□ 0.53
PTPN13-207ENST00000508063 COL17A1Q9UMD9 1497 aaPredicted RBP18.35■□□□□ 0.53
PTPN13-207ENST00000508063 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.34■□□□□ 0.53
PTPN13-207ENST00000508063 HNRNPUL2Q1KMD3 747 aaKnown RBP18.34■□□□□ 0.53
PTPN13-207ENST00000508063 FHOD3Q2V2M9 1422 aa18.33■□□□□ 0.53
PTPN13-207ENST00000508063 KDM4FA0A1W2PPD8 638 aa18.31■□□□□ 0.52
PTPN13-207ENST00000508063 UBTFP17480 764 aaKnown RBP18.31■□□□□ 0.52
PTPN13-207ENST00000508063 NUP153P49790 1475 aaKnown RBP18.29■□□□□ 0.52
PTPN13-207ENST00000508063 MSH5O43196 834 aa18.29■□□□□ 0.52
PTPN13-207ENST00000508063 ABCA9Q8IUA7 1624 aa18.29■□□□□ 0.52
PTPN13-207ENST00000508063 PHLDB1Q86UU1 1377 aa18.28■□□□□ 0.52
PTPN13-207ENST00000508063 PLEKHD1A6NEE1 506 aa18.26■□□□□ 0.51
PTPN13-207ENST00000508063 EHMT2Q96KQ7 1210 aa18.24■□□□□ 0.51
PTPN13-207ENST00000508063 ARAP3Q8WWN8 1544 aa18.23■□□□□ 0.51
PTPN13-207ENST00000508063 ADGRL1O94910 1474 aa18.22■□□□□ 0.51
PTPN13-207ENST00000508063 FMN1Q68DA7 1419 aa18.2■□□□□ 0.5
PTPN13-207ENST00000508063 NEO1Q92859 1461 aa18.2■□□□□ 0.5
PTPN13-207ENST00000508063 ARHGAP35Q9NRY4 1499 aa18.16■□□□□ 0.5
PTPN13-207ENST00000508063 HECW1Q76N89 1606 aa18.14■□□□□ 0.49
PTPN13-207ENST00000508063 ATP1B4Q9UN42 357 aaPredicted RBP18.14■□□□□ 0.49
PTPN13-207ENST00000508063 CDK11AQ9UQ88 783 aaPredicted RBP18.13■□□□□ 0.49
PTPN13-207ENST00000508063 CFAP74Q9C0B2 1584 aa18.13■□□□□ 0.49
PTPN13-207ENST00000508063 CDK13Q14004 1512 aaKnown RBP18.12■□□□□ 0.49
PTPN13-207ENST00000508063 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.11■□□□□ 0.49
PTPN13-207ENST00000508063 RAPGEF3O95398 923 aa18.1■□□□□ 0.49
PTPN13-207ENST00000508063 FANCAO15360 1455 aa18.08■□□□□ 0.49
PTPN13-207ENST00000508063 AKNAQ7Z591 1439 aa18.07■□□□□ 0.48
PTPN13-207ENST00000508063 TTC37Q6PGP7 1564 aa18.07■□□□□ 0.48
PTPN13-207ENST00000508063 DENND4BO75064 1496 aaPredicted RBP18.07■□□□□ 0.48
PTPN13-207ENST00000508063 FRMPD1Q5SYB0 1578 aa18.04■□□□□ 0.48
PTPN13-207ENST00000508063 PLCH2O75038 1416 aa18.03■□□□□ 0.48
PTPN13-207ENST00000508063 CLIP1P30622 1438 aa18.03■□□□□ 0.48
PTPN13-207ENST00000508063 RICTORQ6R327 1708 aa18.02■□□□□ 0.48
PTPN13-207ENST00000508063 KIF14Q15058 1648 aa18.01■□□□□ 0.47
PTPN13-207ENST00000508063 TROQ12816 1431 aaPredicted RBP18■□□□□ 0.47
PTPN13-207ENST00000508063 MYO5CQ9NQX4 1742 aa18■□□□□ 0.47
PTPN13-207ENST00000508063 CASKIN1Q8WXD9 1431 aa17.99■□□□□ 0.47
PTPN13-207ENST00000508063 EFCAB2Q5VUJ9 269 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms