RNA–Protein interactions for RNA: ENST00000507118.5

SMAD5-202, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-202ENST00000507118 KIF13AQ9H1H9 1805 aa40.35■■■■■ 4.05
SMAD5-202ENST00000507118 KIF27Q86VH2 1401 aa40.32■■■■■ 4.04
SMAD5-202ENST00000507118 KIAA0586Q9BVV6 1533 aa40.3■■■■■ 4.04
SMAD5-202ENST00000507118 CUL7Q14999 1698 aa40.29■■■■■ 4.04
SMAD5-202ENST00000507118 MAPKBP1O60336 1514 aa40.2■■■■■ 4.03
SMAD5-202ENST00000507118 ADCY10Q96PN6 1610 aa40.16■■■■■ 4.02
SMAD5-202ENST00000507118 ABCC10Q5T3U5 1492 aa40.16■■■■■ 4.02
SMAD5-202ENST00000507118 AEBP2Q6ZN18 517 aaPredicted RBP40.14■■■■■ 4.02
SMAD5-202ENST00000507118 NPM1P06748 294 aaKnown RBP eCLIP40.06■■■■■ 4
SMAD5-202ENST00000507118 DIP2BQ9P265 1576 aa40.05■■■■■ 4
SMAD5-202ENST00000507118 CARMIL1Q5VZK9 1371 aa40.04■■■■■ 4
SMAD5-202ENST00000507118 FAM69CQ0P6D2 419 aa40.01■■■■■ 4
SMAD5-202ENST00000507118 PTPRGP23470 1445 aa39.9■■■■□ 3.98
SMAD5-202ENST00000507118 IQGAP2Q13576 1575 aa39.85■■■■□ 3.97
SMAD5-202ENST00000507118 CARMIL2Q6F5E8 1435 aa39.84■■■■□ 3.97
SMAD5-202ENST00000507118 TNIKQ9UKE5 1360 aa39.84■■■■□ 3.97
SMAD5-202ENST00000507118 ABCC2Q92887 1545 aa39.77■■■■□ 3.96
SMAD5-202ENST00000507118 DISP1Q96F81 1524 aa39.72■■■■□ 3.95
SMAD5-202ENST00000507118 UHRF1BP1LA0JNW5 1464 aa39.72■■■■□ 3.95
SMAD5-202ENST00000507118 KDM6BO15054 1643 aa39.69■■■■□ 3.94
SMAD5-202ENST00000507118 RAPGEF2Q9Y4G8 1499 aa39.68■■■■□ 3.94
SMAD5-202ENST00000507118 UGGT2Q9NYU1 1516 aa39.65■■■■□ 3.94
SMAD5-202ENST00000507118 TSPOAP1O95153 1857 aa39.64■■■■□ 3.94
SMAD5-202ENST00000507118 PLB1Q6P1J6 1458 aa39.62■■■■□ 3.93
SMAD5-202ENST00000507118 UACAQ9BZF9 1416 aa39.62■■■■□ 3.93
SMAD5-202ENST00000507118 GLI2P10070 1586 aa39.61■■■■□ 3.93
SMAD5-202ENST00000507118 ASXL2Q76L83 1435 aa39.61■■■■□ 3.93
SMAD5-202ENST00000507118 TTBK1Q5TCY1 1321 aaPredicted RBP39.58■■■■□ 3.93
SMAD5-202ENST00000507118 KDM5BQ9UGL1 1544 aa39.54■■■■□ 3.92
SMAD5-202ENST00000507118 PPRC1Q5VV67 1664 aaKnown RBP39.51■■■■□ 3.92
SMAD5-202ENST00000507118 KIAA0556O60303 1618 aa39.51■■■■□ 3.92
SMAD5-202ENST00000507118 EPRSP07814 1512 aaKnown RBP39.4■■■■□ 3.9
SMAD5-202ENST00000507118 KDM4FA0A1W2PPD8 638 aa39.39■■■■□ 3.9
SMAD5-202ENST00000507118 ZCCHC11Q5TAX3 1644 aaKnown RBP39.38■■■■□ 3.89
SMAD5-202ENST00000507118 MAP3K4Q9Y6R4 1608 aa39.36■■■■□ 3.89
SMAD5-202ENST00000507118 CTTNBP2Q8WZ74 1663 aa39.35■■■■□ 3.89
SMAD5-202ENST00000507118 PRXQ9BXM0 1461 aa39.29■■■■□ 3.88
SMAD5-202ENST00000507118 GOLGA3Q08378 1498 aa39.25■■■■□ 3.87
SMAD5-202ENST00000507118 COL17A1Q9UMD9 1497 aaPredicted RBP39.24■■■■□ 3.87
SMAD5-202ENST00000507118 TEX14Q8IWB6 1497 aa39.22■■■■□ 3.87
SMAD5-202ENST00000507118 WDR7Q9Y4E6 1490 aa39.22■■■■□ 3.87
SMAD5-202ENST00000507118 ABCA8O94911 1581 aa39.19■■■■□ 3.86
SMAD5-202ENST00000507118 ADGRL1O94910 1474 aa39.03■■■■□ 3.84
SMAD5-202ENST00000507118 MAGI3Q5TCQ9 1506 aa39.03■■■■□ 3.84
SMAD5-202ENST00000507118 CFAP43Q8NDM7 1665 aa39.02■■■■□ 3.84
SMAD5-202ENST00000507118 CD109Q6YHK3 1445 aa38.97■■■■□ 3.83
SMAD5-202ENST00000507118 KCNH8Q96L42 1107 aa38.85■■■■□ 3.81
SMAD5-202ENST00000507118 SAMD9Q5K651 1589 aa38.85■■■■□ 3.81
SMAD5-202ENST00000507118 ATP10BO94823 1461 aa38.83■■■■□ 3.81
SMAD5-202ENST00000507118 CSRNP3Q8WYN3 585 aa38.82■■■■□ 3.8
SMAD5-202ENST00000507118 ARAP3Q8WWN8 1544 aa38.73■■■■□ 3.79
SMAD5-202ENST00000507118 P3H3Q8IVL6 736 aa38.73■■■■□ 3.79
SMAD5-202ENST00000507118 FAM9AQ8IZU1 332 aaPredicted RBP38.73■■■■□ 3.79
SMAD5-202ENST00000507118 ABCA9Q8IUA7 1624 aa38.71■■■■□ 3.79
SMAD5-202ENST00000507118 EEA1Q15075 1411 aa38.7■■■■□ 3.79
SMAD5-202ENST00000507118 RAPGEF6Q8TEU7 1601 aa38.68■■■■□ 3.78
SMAD5-202ENST00000507118 PHLDB1Q86UU1 1377 aa38.63■■■■□ 3.77
SMAD5-202ENST00000507118 ARID3CA6NKF2 412 aa38.63■■■■□ 3.77
SMAD5-202ENST00000507118 NUP153P49790 1475 aaKnown RBP38.57■■■■□ 3.76
SMAD5-202ENST00000507118 HECW2Q9P2P5 1572 aa38.56■■■■□ 3.76
SMAD5-202ENST00000507118 KIF21BO75037 1637 aa38.54■■■■□ 3.76
SMAD5-202ENST00000507118 NEO1Q92859 1461 aa38.53■■■■□ 3.76
SMAD5-202ENST00000507118 FHOD3Q2V2M9 1422 aa38.47■■■■□ 3.75
SMAD5-202ENST00000507118 EFCAB5A4FU69 1503 aa38.4■■■■□ 3.74
SMAD5-202ENST00000507118 FRMPD1Q5SYB0 1578 aa38.39■■■■□ 3.74
SMAD5-202ENST00000507118 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.37■■■■□ 3.73
SMAD5-202ENST00000507118 HNRNPUL2Q1KMD3 747 aaKnown RBP38.37■■■■□ 3.73
SMAD5-202ENST00000507118 RAPGEF3O95398 923 aa38.36■■■■□ 3.73
SMAD5-202ENST00000507118 ADAMTSL3P82987 1691 aa38.33■■■■□ 3.73
SMAD5-202ENST00000507118 ILDR1Q86SU0 546 aaPredicted RBP38.31■■■■□ 3.72
SMAD5-202ENST00000507118 RANGAP1P46060 587 aaPredicted RBP38.29■■■■□ 3.72
SMAD5-202ENST00000507118 PLEKHD1A6NEE1 506 aa38.28■■■■□ 3.72
SMAD5-202ENST00000507118 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.24■■■■□ 3.71
SMAD5-202ENST00000507118 PTPRMP28827 1452 aa38.22■■■■□ 3.71
SMAD5-202ENST00000507118 RICTORQ6R327 1708 aa38.21■■■■□ 3.71
SMAD5-202ENST00000507118 BCORL1Q5H9F3 1711 aa38.21■■■■□ 3.71
SMAD5-202ENST00000507118 CFAP74Q9C0B2 1584 aa38.19■■■■□ 3.7
SMAD5-202ENST00000507118 DENND4BO75064 1496 aaPredicted RBP38.19■■■■□ 3.7
SMAD5-202ENST00000507118 AKNAQ7Z591 1439 aa38.19■■■■□ 3.7
SMAD5-202ENST00000507118 ARHGEF40Q8TER5 1519 aa38.18■■■■□ 3.7
SMAD5-202ENST00000507118 FANCAO15360 1455 aa38.18■■■■□ 3.7
SMAD5-202ENST00000507118 TTC37Q6PGP7 1564 aa38.18■■■■□ 3.7
SMAD5-202ENST00000507118 CDK13Q14004 1512 aaKnown RBP38.12■■■■□ 3.69
SMAD5-202ENST00000507118 ZMYM4Q5VZL5 1548 aa38.12■■■■□ 3.69
SMAD5-202ENST00000507118 MADDQ8WXG6 1647 aa38.09■■■■□ 3.69
SMAD5-202ENST00000507118 FMN1Q68DA7 1419 aa38.03■■■■□ 3.68
SMAD5-202ENST00000507118 ARHGAP35Q9NRY4 1499 aa38.02■■■■□ 3.68
SMAD5-202ENST00000507118 ARID4BQ4LE39 1312 aaPredicted RBP38.01■■■■□ 3.68
SMAD5-202ENST00000507118 PLCH2O75038 1416 aa38.01■■■■□ 3.68
SMAD5-202ENST00000507118 MAGI2Q86UL8 1455 aa38■■■■□ 3.67
SMAD5-202ENST00000507118 HECW1Q76N89 1606 aa37.99■■■■□ 3.67
SMAD5-202ENST00000507118 ZFYVE16Q7Z3T8 1539 aa37.96■■■■□ 3.67
SMAD5-202ENST00000507118 YEATS2Q9ULM3 1422 aa37.95■■■■□ 3.67
SMAD5-202ENST00000507118 UBTFP17480 764 aaKnown RBP37.94■■■■□ 3.66
SMAD5-202ENST00000507118 PCF11O94913 1555 aaKnown RBP37.93■■■■□ 3.66
SMAD5-202ENST00000507118 SIGLEC1Q9BZZ2 1709 aa37.93■■■■□ 3.66
SMAD5-202ENST00000507118 CHIC1Q5VXU3 224 aa37.92■■■■□ 3.66
SMAD5-202ENST00000507118 POGZQ7Z3K3 1410 aa37.92■■■■□ 3.66
SMAD5-202ENST00000507118 RIMS1Q86UR5 1692 aaKnown RBP37.91■■■■□ 3.66
SMAD5-202ENST00000507118 LMTK3Q96Q04 1460 aa37.9■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms