RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 RUSC2Q8N2Y8 1516 aa33.48■■■□□ 2.95
SNX25-204ENST00000506896 KIAA0586Q9BVV6 1533 aa33.42■■■□□ 2.94
SNX25-204ENST00000506896 CHIC1Q5VXU3 224 aa33.41■■■□□ 2.94
SNX25-204ENST00000506896 PRG4Q92954 1404 aaPredicted RBP33.41■■■□□ 2.94
SNX25-204ENST00000506896 EEA1Q15075 1411 aa33.26■■■□□ 2.91
SNX25-204ENST00000506896 RAPGEF2Q9Y4G8 1499 aa33.25■■■□□ 2.91
SNX25-204ENST00000506896 TRHP20396 242 aaPredicted RBP33.22■■■□□ 2.91
SNX25-204ENST00000506896 CSRNP3Q8WYN3 585 aa33.15■■■□□ 2.9
SNX25-204ENST00000506896 PRXQ9BXM0 1461 aa33.14■■■□□ 2.9
SNX25-204ENST00000506896 IQGAP2Q13576 1575 aa33.13■■■□□ 2.89
SNX25-204ENST00000506896 CARMIL2Q6F5E8 1435 aa33.02■■■□□ 2.88
SNX25-204ENST00000506896 UGGT2Q9NYU1 1516 aa32.98■■■□□ 2.87
SNX25-204ENST00000506896 PTPRGP23470 1445 aa32.98■■■□□ 2.87
SNX25-204ENST00000506896 FAM9AQ8IZU1 332 aaPredicted RBP32.98■■■□□ 2.87
SNX25-204ENST00000506896 DISP1Q96F81 1524 aa32.97■■■□□ 2.87
SNX25-204ENST00000506896 TNIKQ9UKE5 1360 aa32.97■■■□□ 2.87
SNX25-204ENST00000506896 ADCY10Q96PN6 1610 aa32.95■■■□□ 2.87
SNX25-204ENST00000506896 CTTNBP2Q8WZ74 1663 aa32.94■■■□□ 2.86
SNX25-204ENST00000506896 NPM1P06748 294 aaKnown RBP eCLIP32.88■■■□□ 2.85
SNX25-204ENST00000506896 KIF21BO75037 1637 aa32.85■■■□□ 2.85
SNX25-204ENST00000506896 TTBK1Q5TCY1 1321 aaPredicted RBP32.83■■■□□ 2.85
SNX25-204ENST00000506896 KIAA0556O60303 1618 aa32.83■■■□□ 2.85
SNX25-204ENST00000506896 MAPKBP1O60336 1514 aa32.82■■■□□ 2.84
SNX25-204ENST00000506896 KIF13AQ9H1H9 1805 aa32.79■■■□□ 2.84
SNX25-204ENST00000506896 UHRF1BP1LA0JNW5 1464 aa32.75■■■□□ 2.83
SNX25-204ENST00000506896 UACAQ9BZF9 1416 aa32.75■■■□□ 2.83
SNX25-204ENST00000506896 GOLGA3Q08378 1498 aa32.74■■■□□ 2.83
SNX25-204ENST00000506896 ABCC10Q5T3U5 1492 aa32.73■■■□□ 2.83
SNX25-204ENST00000506896 ABCC2Q92887 1545 aa32.72■■■□□ 2.83
SNX25-204ENST00000506896 FAM69CQ0P6D2 419 aa32.66■■■□□ 2.82
SNX25-204ENST00000506896 DIP2BQ9P265 1576 aa32.64■■■□□ 2.82
SNX25-204ENST00000506896 KDM5BQ9UGL1 1544 aa32.61■■■□□ 2.81
SNX25-204ENST00000506896 UBTFP17480 764 aaKnown RBP32.56■■■□□ 2.8
SNX25-204ENST00000506896 PLB1Q6P1J6 1458 aa32.55■■■□□ 2.8
SNX25-204ENST00000506896 ASXL2Q76L83 1435 aa32.55■■■□□ 2.8
SNX25-204ENST00000506896 ABCA8O94911 1581 aa32.53■■■□□ 2.8
SNX25-204ENST00000506896 SAMD9Q5K651 1589 aa32.53■■■□□ 2.8
SNX25-204ENST00000506896 ZCCHC11Q5TAX3 1644 aaKnown RBP32.51■■■□□ 2.79
SNX25-204ENST00000506896 P3H3Q8IVL6 736 aa32.5■■■□□ 2.79
SNX25-204ENST00000506896 EHMT2Q96KQ7 1210 aa32.49■■■□□ 2.79
SNX25-204ENST00000506896 GLI2P10070 1586 aa32.43■■■□□ 2.78
SNX25-204ENST00000506896 EFCAB5A4FU69 1503 aa32.41■■■□□ 2.78
SNX25-204ENST00000506896 TSPOAP1O95153 1857 aa32.39■■■□□ 2.78
SNX25-204ENST00000506896 RANGAP1P46060 587 aaPredicted RBP32.38■■■□□ 2.77
SNX25-204ENST00000506896 EPRSP07814 1512 aaKnown RBP32.36■■■□□ 2.77
SNX25-204ENST00000506896 WDR7Q9Y4E6 1490 aa32.31■■■□□ 2.76
SNX25-204ENST00000506896 FHOD3Q2V2M9 1422 aa32.29■■■□□ 2.76
SNX25-204ENST00000506896 ATP10BO94823 1461 aa32.28■■■□□ 2.76
SNX25-204ENST00000506896 PPRC1Q5VV67 1664 aaKnown RBP32.27■■■□□ 2.76
SNX25-204ENST00000506896 RAPGEF6Q8TEU7 1601 aa32.26■■■□□ 2.76
SNX25-204ENST00000506896 MAP3K4Q9Y6R4 1608 aa32.25■■■□□ 2.75
SNX25-204ENST00000506896 ARHGAP35Q9NRY4 1499 aa32.21■■■□□ 2.75
SNX25-204ENST00000506896 ARID3CA6NKF2 412 aa32.18■■■□□ 2.74
SNX25-204ENST00000506896 KDM6BO15054 1643 aa32.18■■■□□ 2.74
SNX25-204ENST00000506896 KCNH8Q96L42 1107 aa32.17■■■□□ 2.74
SNX25-204ENST00000506896 NUP153P49790 1475 aaKnown RBP32.16■■■□□ 2.74
SNX25-204ENST00000506896 FMN1Q68DA7 1419 aa32.11■■■□□ 2.73
SNX25-204ENST00000506896 CFAP43Q8NDM7 1665 aa32.1■■■□□ 2.73
SNX25-204ENST00000506896 TEX14Q8IWB6 1497 aa32.08■■■□□ 2.73
SNX25-204ENST00000506896 CLIP1P30622 1438 aa32.08■■■□□ 2.73
SNX25-204ENST00000506896 CD109Q6YHK3 1445 aa32.07■■■□□ 2.72
SNX25-204ENST00000506896 MAGI3Q5TCQ9 1506 aa32.05■■■□□ 2.72
SNX25-204ENST00000506896 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.03■■■□□ 2.72
SNX25-204ENST00000506896 HNRNPUL2Q1KMD3 747 aaKnown RBP32.03■■■□□ 2.72
SNX25-204ENST00000506896 COL17A1Q9UMD9 1497 aaPredicted RBP32.03■■■□□ 2.72
SNX25-204ENST00000506896 LOC105371045A0A1W2PR82 267 aa32■■■□□ 2.71
SNX25-204ENST00000506896 ABCA9Q8IUA7 1624 aa31.97■■■□□ 2.71
SNX25-204ENST00000506896 CEP162Q5TB80 1403 aa31.95■■■□□ 2.71
SNX25-204ENST00000506896 PLEKHD1A6NEE1 506 aa31.94■■■□□ 2.7
SNX25-204ENST00000506896 HECW1Q76N89 1606 aa31.92■■■□□ 2.7
SNX25-204ENST00000506896 CDK13Q14004 1512 aaKnown RBP31.88■■■□□ 2.69
SNX25-204ENST00000506896 CASKIN1Q8WXD9 1431 aa31.84■■■□□ 2.69
SNX25-204ENST00000506896 ATP1B4Q9UN42 357 aaPredicted RBP31.84■■■□□ 2.69
SNX25-204ENST00000506896 PCF11O94913 1555 aaKnown RBP31.8■■■□□ 2.68
SNX25-204ENST00000506896 FYCO1Q9BQS8 1478 aa31.79■■■□□ 2.68
SNX25-204ENST00000506896 ARAP3Q8WWN8 1544 aa31.79■■■□□ 2.68
SNX25-204ENST00000506896 PHLDB1Q86UU1 1377 aa31.79■■■□□ 2.68
SNX25-204ENST00000506896 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.77■■■□□ 2.68
SNX25-204ENST00000506896 AEBP2Q6ZN18 517 aaPredicted RBP31.77■■■□□ 2.68
SNX25-204ENST00000506896 LRRIQ1Q96JM4 1722 aa31.76■■■□□ 2.67
SNX25-204ENST00000506896 CCDC18Q5T9S5 1454 aa31.74■■■□□ 2.67
SNX25-204ENST00000506896 NEO1Q92859 1461 aa31.74■■■□□ 2.67
SNX25-204ENST00000506896 CDK11AQ9UQ88 783 aaPredicted RBP31.73■■■□□ 2.67
SNX25-204ENST00000506896 TTC37Q6PGP7 1564 aa31.69■■■□□ 2.66
SNX25-204ENST00000506896 KDM4FA0A1W2PPD8 638 aa31.68■■■□□ 2.66
SNX25-204ENST00000506896 TROQ12816 1431 aaPredicted RBP31.63■■■□□ 2.65
SNX25-204ENST00000506896 RAPGEF3O95398 923 aa31.6■■■□□ 2.65
SNX25-204ENST00000506896 FANCAO15360 1455 aa31.59■■■□□ 2.65
SNX25-204ENST00000506896 PLCH2O75038 1416 aa31.59■■■□□ 2.65
SNX25-204ENST00000506896 AKNAQ7Z591 1439 aa31.59■■■□□ 2.65
SNX25-204ENST00000506896 VPS8Q8N3P4 1428 aa31.58■■■□□ 2.65
SNX25-204ENST00000506896 KIF14Q15058 1648 aa31.57■■■□□ 2.64
SNX25-204ENST00000506896 CFAP74Q9C0B2 1584 aa31.56■■■□□ 2.64
SNX25-204ENST00000506896 FRMPD1Q5SYB0 1578 aa31.53■■■□□ 2.64
SNX25-204ENST00000506896 MYO5CQ9NQX4 1742 aa31.51■■■□□ 2.63
SNX25-204ENST00000506896 DENND4BO75064 1496 aaPredicted RBP31.5■■■□□ 2.63
SNX25-204ENST00000506896 ADGRL1O94910 1474 aa31.49■■■□□ 2.63
SNX25-204ENST00000506896 RICTORQ6R327 1708 aa31.49■■■□□ 2.63
SNX25-204ENST00000506896 EFCAB2Q5VUJ9 269 aa31.46■■■□□ 2.63
SNX25-204ENST00000506896 SCAPERQ9BY12 1400 aa31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms