RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 IGF1RP08069 1367 aa25.41■■□□□ 1.66
SEC24D-208ENST00000506622 CUL7Q14999 1698 aa25.37■■□□□ 1.65
SEC24D-208ENST00000506622 KIAA0586Q9BVV6 1533 aa25.34■■□□□ 1.65
SEC24D-208ENST00000506622 NPM1P06748 294 aaKnown RBP eCLIP25.34■■□□□ 1.65
SEC24D-208ENST00000506622 AEBP2Q6ZN18 517 aaPredicted RBP25.3■■□□□ 1.64
SEC24D-208ENST00000506622 KIF13AQ9H1H9 1805 aa25.3■■□□□ 1.64
SEC24D-208ENST00000506622 CARMIL1Q5VZK9 1371 aa25.26■■□□□ 1.63
SEC24D-208ENST00000506622 FAM69CQ0P6D2 419 aa25.22■■□□□ 1.63
SEC24D-208ENST00000506622 ADCY10Q96PN6 1610 aa25.2■■□□□ 1.62
SEC24D-208ENST00000506622 ABCC10Q5T3U5 1492 aa25.19■■□□□ 1.62
SEC24D-208ENST00000506622 MAPKBP1O60336 1514 aa25.18■■□□□ 1.62
SEC24D-208ENST00000506622 PTPRGP23470 1445 aa25.14■■□□□ 1.62
SEC24D-208ENST00000506622 CARMIL2Q6F5E8 1435 aa25.13■■□□□ 1.61
SEC24D-208ENST00000506622 TTBK1Q5TCY1 1321 aaPredicted RBP25.13■■□□□ 1.61
SEC24D-208ENST00000506622 DIP2BQ9P265 1576 aa25.1■■□□□ 1.61
SEC24D-208ENST00000506622 IQGAP2Q13576 1575 aa25.08■■□□□ 1.61
SEC24D-208ENST00000506622 TNIKQ9UKE5 1360 aa25.08■■□□□ 1.61
SEC24D-208ENST00000506622 RAPGEF2Q9Y4G8 1499 aa25.02■■□□□ 1.6
SEC24D-208ENST00000506622 TSPOAP1O95153 1857 aa25■■□□□ 1.59
SEC24D-208ENST00000506622 ABCC2Q92887 1545 aa24.98■■□□□ 1.59
SEC24D-208ENST00000506622 DISP1Q96F81 1524 aa24.95■■□□□ 1.58
SEC24D-208ENST00000506622 UACAQ9BZF9 1416 aa24.93■■□□□ 1.58
SEC24D-208ENST00000506622 KDM6BO15054 1643 aa24.92■■□□□ 1.58
SEC24D-208ENST00000506622 UHRF1BP1LA0JNW5 1464 aa24.92■■□□□ 1.58
SEC24D-208ENST00000506622 UGGT2Q9NYU1 1516 aa24.92■■□□□ 1.58
SEC24D-208ENST00000506622 PLB1Q6P1J6 1458 aa24.91■■□□□ 1.58
SEC24D-208ENST00000506622 ASXL2Q76L83 1435 aa24.91■■□□□ 1.58
SEC24D-208ENST00000506622 KIAA0556O60303 1618 aa24.85■■□□□ 1.57
SEC24D-208ENST00000506622 GLI2P10070 1586 aa24.83■■□□□ 1.56
SEC24D-208ENST00000506622 CTTNBP2Q8WZ74 1663 aa24.82■■□□□ 1.56
SEC24D-208ENST00000506622 KDM5BQ9UGL1 1544 aa24.81■■□□□ 1.56
SEC24D-208ENST00000506622 ZCCHC11Q5TAX3 1644 aaKnown RBP24.76■■□□□ 1.55
SEC24D-208ENST00000506622 GOLGA3Q08378 1498 aa24.75■■□□□ 1.55
SEC24D-208ENST00000506622 EPRSP07814 1512 aaKnown RBP24.75■■□□□ 1.55
SEC24D-208ENST00000506622 PPRC1Q5VV67 1664 aaKnown RBP24.74■■□□□ 1.55
SEC24D-208ENST00000506622 PRXQ9BXM0 1461 aa24.73■■□□□ 1.55
SEC24D-208ENST00000506622 KDM4FA0A1W2PPD8 638 aa24.69■■□□□ 1.54
SEC24D-208ENST00000506622 MAP3K4Q9Y6R4 1608 aa24.68■■□□□ 1.54
SEC24D-208ENST00000506622 FAM9AQ8IZU1 332 aaPredicted RBP24.66■■□□□ 1.54
SEC24D-208ENST00000506622 TEX14Q8IWB6 1497 aa24.66■■□□□ 1.54
SEC24D-208ENST00000506622 WDR7Q9Y4E6 1490 aa24.65■■□□□ 1.54
SEC24D-208ENST00000506622 ABCA8O94911 1581 aa24.62■■□□□ 1.53
SEC24D-208ENST00000506622 CSRNP3Q8WYN3 585 aa24.6■■□□□ 1.53
SEC24D-208ENST00000506622 KCNH8Q96L42 1107 aa24.6■■□□□ 1.53
SEC24D-208ENST00000506622 COL17A1Q9UMD9 1497 aaPredicted RBP24.59■■□□□ 1.53
SEC24D-208ENST00000506622 P3H3Q8IVL6 736 aa24.56■■□□□ 1.52
SEC24D-208ENST00000506622 CD109Q6YHK3 1445 aa24.54■■□□□ 1.52
SEC24D-208ENST00000506622 CFAP43Q8NDM7 1665 aa24.52■■□□□ 1.52
SEC24D-208ENST00000506622 MAGI3Q5TCQ9 1506 aa24.49■■□□□ 1.51
SEC24D-208ENST00000506622 ARID3CA6NKF2 412 aa24.48■■□□□ 1.51
SEC24D-208ENST00000506622 ADGRL1O94910 1474 aa24.47■■□□□ 1.51
SEC24D-208ENST00000506622 EEA1Q15075 1411 aa24.45■■□□□ 1.5
SEC24D-208ENST00000506622 ATP10BO94823 1461 aa24.43■■□□□ 1.5
SEC24D-208ENST00000506622 SAMD9Q5K651 1589 aa24.43■■□□□ 1.5
SEC24D-208ENST00000506622 RANGAP1P46060 587 aaPredicted RBP24.39■■□□□ 1.5
SEC24D-208ENST00000506622 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.38■■□□□ 1.49
SEC24D-208ENST00000506622 HNRNPUL2Q1KMD3 747 aaKnown RBP24.38■■□□□ 1.49
SEC24D-208ENST00000506622 RAPGEF6Q8TEU7 1601 aa24.36■■□□□ 1.49
SEC24D-208ENST00000506622 ABCA9Q8IUA7 1624 aa24.31■■□□□ 1.48
SEC24D-208ENST00000506622 ARAP3Q8WWN8 1544 aa24.3■■□□□ 1.48
SEC24D-208ENST00000506622 PHLDB1Q86UU1 1377 aa24.29■■□□□ 1.48
SEC24D-208ENST00000506622 FHOD3Q2V2M9 1422 aa24.28■■□□□ 1.48
SEC24D-208ENST00000506622 NUP153P49790 1475 aaKnown RBP24.26■■□□□ 1.47
SEC24D-208ENST00000506622 PLEKHD1A6NEE1 506 aa24.23■■□□□ 1.47
SEC24D-208ENST00000506622 KIF21BO75037 1637 aa24.23■■□□□ 1.47
SEC24D-208ENST00000506622 NEO1Q92859 1461 aa24.21■■□□□ 1.47
SEC24D-208ENST00000506622 EFCAB5A4FU69 1503 aa24.2■■□□□ 1.46
SEC24D-208ENST00000506622 RAPGEF3O95398 923 aa24.19■■□□□ 1.46
SEC24D-208ENST00000506622 UBTFP17480 764 aaKnown RBP24.14■■□□□ 1.46
SEC24D-208ENST00000506622 HECW2Q9P2P5 1572 aa24.14■■□□□ 1.46
SEC24D-208ENST00000506622 EHMT2Q96KQ7 1210 aa24.13■■□□□ 1.45
SEC24D-208ENST00000506622 CHIC1Q5VXU3 224 aa24.08■■□□□ 1.44
SEC24D-208ENST00000506622 ARID4BQ4LE39 1312 aaPredicted RBP24.07■■□□□ 1.44
SEC24D-208ENST00000506622 ATP1B4Q9UN42 357 aaPredicted RBP24.06■■□□□ 1.44
SEC24D-208ENST00000506622 AKNAQ7Z591 1439 aa24.06■■□□□ 1.44
SEC24D-208ENST00000506622 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.06■■□□□ 1.44
SEC24D-208ENST00000506622 FANCAO15360 1455 aa24.05■■□□□ 1.44
SEC24D-208ENST00000506622 DENND4BO75064 1496 aaPredicted RBP24.05■■□□□ 1.44
SEC24D-208ENST00000506622 FRMPD1Q5SYB0 1578 aa24.05■■□□□ 1.44
SEC24D-208ENST00000506622 CFAP74Q9C0B2 1584 aa24.04■■□□□ 1.44
SEC24D-208ENST00000506622 CDK13Q14004 1512 aaKnown RBP24.02■■□□□ 1.44
SEC24D-208ENST00000506622 ADAMTSL3P82987 1691 aa24.02■■□□□ 1.44
SEC24D-208ENST00000506622 FMN1Q68DA7 1419 aa24.01■■□□□ 1.43
SEC24D-208ENST00000506622 TTC37Q6PGP7 1564 aa24.01■■□□□ 1.43
SEC24D-208ENST00000506622 ILDR1Q86SU0 546 aaPredicted RBP24■■□□□ 1.43
SEC24D-208ENST00000506622 RICTORQ6R327 1708 aa24■■□□□ 1.43
SEC24D-208ENST00000506622 PTPRMP28827 1452 aa23.99■■□□□ 1.43
SEC24D-208ENST00000506622 BCORL1Q5H9F3 1711 aa23.98■■□□□ 1.43
SEC24D-208ENST00000506622 CDK11AQ9UQ88 783 aaPredicted RBP23.97■■□□□ 1.43
SEC24D-208ENST00000506622 HECW1Q76N89 1606 aa23.96■■□□□ 1.43
SEC24D-208ENST00000506622 ARHGAP35Q9NRY4 1499 aa23.96■■□□□ 1.43
SEC24D-208ENST00000506622 ARHGEF40Q8TER5 1519 aa23.94■■□□□ 1.42
SEC24D-208ENST00000506622 PLCH2O75038 1416 aa23.93■■□□□ 1.42
SEC24D-208ENST00000506622 MADDQ8WXG6 1647 aa23.91■■□□□ 1.42
SEC24D-208ENST00000506622 ZMYM4Q5VZL5 1548 aa23.89■■□□□ 1.42
SEC24D-208ENST00000506622 EFCAB2Q5VUJ9 269 aa23.89■■□□□ 1.42
SEC24D-208ENST00000506622 SCAPERQ9BY12 1400 aa23.89■■□□□ 1.42
SEC24D-208ENST00000506622 MAGI2Q86UL8 1455 aa23.88■■□□□ 1.41
SEC24D-208ENST00000506622 ZFYVE16Q7Z3T8 1539 aa23.88■■□□□ 1.41
SEC24D-208ENST00000506622 POGZQ7Z3K3 1410 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms