RNA–Protein interactions for RNA: ENST00000506205.1

PDPN-207, Transcript of podoplanin, humanhuman

TSL 4

Gene PDPN, Length 476 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-207ENST00000506205 PRG4Q92954 1404 aaPredicted RBP18.36■□□□□ 0.53
PDPN-207ENST00000506205 ERCC6L2Q5T890 1561 aa18.34■□□□□ 0.53
PDPN-207ENST00000506205 RUSC2Q8N2Y8 1516 aa18.33■□□□□ 0.53
PDPN-207ENST00000506205 RAPGEF2Q9Y4G8 1499 aa18.29■□□□□ 0.52
PDPN-207ENST00000506205 TRHP20396 242 aaPredicted RBP18.27■□□□□ 0.52
PDPN-207ENST00000506205 CSRNP3Q8WYN3 585 aa18.2■□□□□ 0.5
PDPN-207ENST00000506205 PRXQ9BXM0 1461 aa18.2■□□□□ 0.5
PDPN-207ENST00000506205 CARMIL2Q6F5E8 1435 aa18.19■□□□□ 0.5
PDPN-207ENST00000506205 IQGAP2Q13576 1575 aa18.16■□□□□ 0.5
PDPN-207ENST00000506205 PTPRGP23470 1445 aa18.15■□□□□ 0.5
PDPN-207ENST00000506205 EEA1Q15075 1411 aa18.15■□□□□ 0.5
PDPN-207ENST00000506205 NPM1P06748 294 aaKnown RBP eCLIP18.15■□□□□ 0.5
PDPN-207ENST00000506205 TNIKQ9UKE5 1360 aa18.15■□□□□ 0.5
PDPN-207ENST00000506205 CHIC1Q5VXU3 224 aa18.14■□□□□ 0.49
PDPN-207ENST00000506205 UGGT2Q9NYU1 1516 aa18.1■□□□□ 0.49
PDPN-207ENST00000506205 DISP1Q96F81 1524 aa18.09■□□□□ 0.49
PDPN-207ENST00000506205 TTBK1Q5TCY1 1321 aaPredicted RBP18.04■□□□□ 0.48
PDPN-207ENST00000506205 FAM9AQ8IZU1 332 aaPredicted RBP18.03■□□□□ 0.48
PDPN-207ENST00000506205 GOLGA3Q08378 1498 aa18.01■□□□□ 0.47
PDPN-207ENST00000506205 UACAQ9BZF9 1416 aa18.01■□□□□ 0.47
PDPN-207ENST00000506205 ADCY10Q96PN6 1610 aa18.01■□□□□ 0.47
PDPN-207ENST00000506205 UHRF1BP1LA0JNW5 1464 aa18■□□□□ 0.47
PDPN-207ENST00000506205 MAPKBP1O60336 1514 aa17.99■□□□□ 0.47
PDPN-207ENST00000506205 KIAA0556O60303 1618 aa17.98■□□□□ 0.47
PDPN-207ENST00000506205 ABCC2Q92887 1545 aa17.97■□□□□ 0.47
PDPN-207ENST00000506205 ABCC10Q5T3U5 1492 aa17.96■□□□□ 0.47
PDPN-207ENST00000506205 FAM69CQ0P6D2 419 aa17.96■□□□□ 0.47
PDPN-207ENST00000506205 CTTNBP2Q8WZ74 1663 aa17.95■□□□□ 0.46
PDPN-207ENST00000506205 KDM5BQ9UGL1 1544 aa17.9■□□□□ 0.46
PDPN-207ENST00000506205 PLB1Q6P1J6 1458 aa17.89■□□□□ 0.45
PDPN-207ENST00000506205 P3H3Q8IVL6 736 aa17.88■□□□□ 0.45
PDPN-207ENST00000506205 KIF21BO75037 1637 aa17.87■□□□□ 0.45
PDPN-207ENST00000506205 ASXL2Q76L83 1435 aa17.87■□□□□ 0.45
PDPN-207ENST00000506205 UBTFP17480 764 aaKnown RBP17.84■□□□□ 0.45
PDPN-207ENST00000506205 DIP2BQ9P265 1576 aa17.83■□□□□ 0.45
PDPN-207ENST00000506205 ABCA8O94911 1581 aa17.83■□□□□ 0.44
PDPN-207ENST00000506205 KIF13AQ9H1H9 1805 aa17.81■□□□□ 0.44
PDPN-207ENST00000506205 SAMD9Q5K651 1589 aa17.8■□□□□ 0.44
PDPN-207ENST00000506205 RANGAP1P46060 587 aaPredicted RBP17.8■□□□□ 0.44
PDPN-207ENST00000506205 GLI2P10070 1586 aa17.78■□□□□ 0.44
PDPN-207ENST00000506205 EHMT2Q96KQ7 1210 aa17.76■□□□□ 0.43
PDPN-207ENST00000506205 EPRSP07814 1512 aaKnown RBP17.76■□□□□ 0.43
PDPN-207ENST00000506205 ZCCHC11Q5TAX3 1644 aaKnown RBP17.76■□□□□ 0.43
PDPN-207ENST00000506205 ATP10BO94823 1461 aa17.74■□□□□ 0.43
PDPN-207ENST00000506205 WDR7Q9Y4E6 1490 aa17.74■□□□□ 0.43
PDPN-207ENST00000506205 EFCAB5A4FU69 1503 aa17.73■□□□□ 0.43
PDPN-207ENST00000506205 FHOD3Q2V2M9 1422 aa17.72■□□□□ 0.43
PDPN-207ENST00000506205 KCNH8Q96L42 1107 aa17.71■□□□□ 0.43
PDPN-207ENST00000506205 ARID3CA6NKF2 412 aa17.68■□□□□ 0.42
PDPN-207ENST00000506205 RAPGEF6Q8TEU7 1601 aa17.66■□□□□ 0.42
PDPN-207ENST00000506205 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.66■□□□□ 0.42
PDPN-207ENST00000506205 HNRNPUL2Q1KMD3 747 aaKnown RBP17.66■□□□□ 0.42
PDPN-207ENST00000506205 NUP153P49790 1475 aaKnown RBP17.65■□□□□ 0.42
PDPN-207ENST00000506205 CD109Q6YHK3 1445 aa17.64■□□□□ 0.41
PDPN-207ENST00000506205 TEX14Q8IWB6 1497 aa17.63■□□□□ 0.41
PDPN-207ENST00000506205 ARHGAP35Q9NRY4 1499 aa17.63■□□□□ 0.41
PDPN-207ENST00000506205 PLEKHD1A6NEE1 506 aa17.63■□□□□ 0.41
PDPN-207ENST00000506205 FMN1Q68DA7 1419 aa17.63■□□□□ 0.41
PDPN-207ENST00000506205 MAP3K4Q9Y6R4 1608 aa17.62■□□□□ 0.41
PDPN-207ENST00000506205 MAGI3Q5TCQ9 1506 aa17.6■□□□□ 0.41
PDPN-207ENST00000506205 KDM6BO15054 1643 aa17.59■□□□□ 0.41
PDPN-207ENST00000506205 PPRC1Q5VV67 1664 aaKnown RBP17.58■□□□□ 0.4
PDPN-207ENST00000506205 TSPOAP1O95153 1857 aa17.57■□□□□ 0.4
PDPN-207ENST00000506205 COL17A1Q9UMD9 1497 aaPredicted RBP17.55■□□□□ 0.4
PDPN-207ENST00000506205 ATP1B4Q9UN42 357 aaPredicted RBP17.54■□□□□ 0.4
PDPN-207ENST00000506205 CFAP43Q8NDM7 1665 aa17.54■□□□□ 0.4
PDPN-207ENST00000506205 PHLDB1Q86UU1 1377 aa17.53■□□□□ 0.4
PDPN-207ENST00000506205 CDK11AQ9UQ88 783 aaPredicted RBP17.53■□□□□ 0.4
PDPN-207ENST00000506205 ABCA9Q8IUA7 1624 aa17.5■□□□□ 0.39
PDPN-207ENST00000506205 CLIP1P30622 1438 aa17.49■□□□□ 0.39
PDPN-207ENST00000506205 AEBP2Q6ZN18 517 aaPredicted RBP17.47■□□□□ 0.39
PDPN-207ENST00000506205 CDK13Q14004 1512 aaKnown RBP17.47■□□□□ 0.39
PDPN-207ENST00000506205 HECW1Q76N89 1606 aa17.46■□□□□ 0.39
PDPN-207ENST00000506205 ARAP3Q8WWN8 1544 aa17.46■□□□□ 0.39
PDPN-207ENST00000506205 CASKIN1Q8WXD9 1431 aa17.46■□□□□ 0.39
PDPN-207ENST00000506205 NEO1Q92859 1461 aa17.44■□□□□ 0.38
PDPN-207ENST00000506205 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.41■□□□□ 0.38
PDPN-207ENST00000506205 TROQ12816 1431 aaPredicted RBP17.39■□□□□ 0.38
PDPN-207ENST00000506205 LOC105371045A0A1W2PR82 267 aa17.39■□□□□ 0.37
PDPN-207ENST00000506205 PLCH2O75038 1416 aa17.38■□□□□ 0.37
PDPN-207ENST00000506205 CCDC18Q5T9S5 1454 aa17.38■□□□□ 0.37
PDPN-207ENST00000506205 KDM4FA0A1W2PPD8 638 aa17.38■□□□□ 0.37
PDPN-207ENST00000506205 FYCO1Q9BQS8 1478 aa17.37■□□□□ 0.37
PDPN-207ENST00000506205 RAPGEF3O95398 923 aa17.37■□□□□ 0.37
PDPN-207ENST00000506205 CEP162Q5TB80 1403 aa17.36■□□□□ 0.37
PDPN-207ENST00000506205 AKNAQ7Z591 1439 aa17.36■□□□□ 0.37
PDPN-207ENST00000506205 FANCAO15360 1455 aa17.36■□□□□ 0.37
PDPN-207ENST00000506205 EFCAB2Q5VUJ9 269 aa17.35■□□□□ 0.37
PDPN-207ENST00000506205 PCF11O94913 1555 aaKnown RBP17.33■□□□□ 0.37
PDPN-207ENST00000506205 TTC37Q6PGP7 1564 aa17.32■□□□□ 0.36
PDPN-207ENST00000506205 DENND4BO75064 1496 aaPredicted RBP17.31■□□□□ 0.36
PDPN-207ENST00000506205 CFAP74Q9C0B2 1584 aa17.28■□□□□ 0.36
PDPN-207ENST00000506205 KIF14Q15058 1648 aa17.28■□□□□ 0.36
PDPN-207ENST00000506205 SCAPERQ9BY12 1400 aa17.27■□□□□ 0.35
PDPN-207ENST00000506205 LRRIQ1Q96JM4 1722 aa17.27■□□□□ 0.35
PDPN-207ENST00000506205 ADGRL1O94910 1474 aa17.25■□□□□ 0.35
PDPN-207ENST00000506205 MAGI2Q86UL8 1455 aa17.23■□□□□ 0.35
PDPN-207ENST00000506205 FRMPD1Q5SYB0 1578 aa17.23■□□□□ 0.35
PDPN-207ENST00000506205 MTUS2Q5JR59 1369 aa17.22■□□□□ 0.35
PDPN-207ENST00000506205 ARHGAP5Q13017 1502 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms