RNA–Protein interactions for RNA: ENST00000506137.1

HTT-203, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-203ENST00000506137 CYB5RLQ6IPT4 315 aa13.31□□□□□ -0.28
HTT-203ENST00000506137 MYO15BQ96JP2 1530 aa13.29□□□□□ -0.28
HTT-203ENST00000506137 ILDR2Q71H61 639 aa13.25□□□□□ -0.29
HTT-203ENST00000506137 ERCC6L2Q5T890 1561 aa13.24□□□□□ -0.29
HTT-203ENST00000506137 SAMD1Q6SPF0 538 aaPredicted RBP13.23□□□□□ -0.29
HTT-203ENST00000506137 PUS7Q96PZ0 661 aaKnown RBP13.23□□□□□ -0.29
HTT-203ENST00000506137 NESP48681 1621 aa13.22□□□□□ -0.29
HTT-203ENST00000506137 DMRT2Q9Y5R5 561 aa13.22□□□□□ -0.29
HTT-203ENST00000506137 ZBTB22O15209 634 aa13.21□□□□□ -0.29
HTT-203ENST00000506137 NBR1Q14596 966 aa13.21□□□□□ -0.29
HTT-203ENST00000506137 ZNF326Q5BKZ1 582 aaKnown RBP13.21□□□□□ -0.29
HTT-203ENST00000506137 POTEDQ86YR6 584 aa13.21□□□□□ -0.29
HTT-203ENST00000506137 SMARCA2P51531 1590 aa13.2□□□□□ -0.3
HTT-203ENST00000506137 BCCIPQ9P287 314 aaKnown RBP eCLIP13.17□□□□□ -0.3
HTT-203ENST00000506137 PKNOX2Q96KN3 472 aa13.15□□□□□ -0.3
HTT-203ENST00000506137 ZBTB7CA1YPR0 619 aa13.13□□□□□ -0.31
HTT-203ENST00000506137 FBLN2P98095 1184 aa13.12□□□□□ -0.31
HTT-203ENST00000506137 ARAP1Q96P48 1450 aa13.1□□□□□ -0.31
HTT-203ENST00000506137 CENPBP07199 599 aaPredicted RBP13.09□□□□□ -0.31
HTT-203ENST00000506137 KIF21AQ7Z4S6 1674 aa13.08□□□□□ -0.31
HTT-203ENST00000506137 SCRIBQ14160 1630 aa13.08□□□□□ -0.32
HTT-203ENST00000506137 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.07□□□□□ -0.32
HTT-203ENST00000506137 DISP3Q9P2K9 1392 aa13.07□□□□□ -0.32
HTT-203ENST00000506137 ARID3AQ99856 593 aa13.05□□□□□ -0.32
HTT-203ENST00000506137 KDM4FA0A1W2PPD8 638 aa13.03□□□□□ -0.32
HTT-203ENST00000506137 IGSF3O75054 1194 aa12.97□□□□□ -0.33
HTT-203ENST00000506137 HECW2Q9P2P5 1572 aa12.97□□□□□ -0.33
HTT-203ENST00000506137 LAMC3Q9Y6N6 1575 aa12.96□□□□□ -0.33
HTT-203ENST00000506137 FGD1P98174 961 aa12.95□□□□□ -0.34
HTT-203ENST00000506137 NCAPD3P42695 1498 aa12.94□□□□□ -0.34
HTT-203ENST00000506137 RSPH4AQ5TD94 716 aa12.94□□□□□ -0.34
HTT-203ENST00000506137 DHX37Q8IY37 1157 aaKnown RBP12.94□□□□□ -0.34
HTT-203ENST00000506137 RNF216Q9NWF9 866 aaPredicted RBP12.94□□□□□ -0.34
HTT-203ENST00000506137 WDR62O43379 1518 aa12.93□□□□□ -0.34
HTT-203ENST00000506137 POLR3GLQ9BT43 218 aa12.93□□□□□ -0.34
HTT-203ENST00000506137 PDS5BQ9NTI5 1447 aa12.92□□□□□ -0.34
HTT-203ENST00000506137 NPM3O75607 178 aaKnown RBP12.91□□□□□ -0.34
HTT-203ENST00000506137 BBXQ8WY36 941 aaPredicted RBP12.9□□□□□ -0.34
HTT-203ENST00000506137 MRC2Q9UBG0 1479 aa12.9□□□□□ -0.34
HTT-203ENST00000506137 HOXD11P31277 338 aaPredicted RBP12.89□□□□□ -0.35
HTT-203ENST00000506137 NPM1P06748 294 aaKnown RBP eCLIP12.83□□□□□ -0.36
HTT-203ENST00000506137 PAXIP1Q6ZW49 1069 aaPredicted RBP12.83□□□□□ -0.36
HTT-203ENST00000506137 CLSTN1O94985 981 aa12.82□□□□□ -0.36
HTT-203ENST00000506137 RSF1Q96T23 1441 aaPredicted RBP12.8□□□□□ -0.36
HTT-203ENST00000506137 FOXD4L1Q9NU39 408 aa12.8□□□□□ -0.36
HTT-203ENST00000506137 SPATA31D1Q6ZQQ2 1576 aa12.78□□□□□ -0.36
HTT-203ENST00000506137 BCL11BQ9C0K0 894 aaPredicted RBP12.78□□□□□ -0.36
HTT-203ENST00000506137 DCAF8L1A6NGE4 600 aa12.77□□□□□ -0.37
HTT-203ENST00000506137 SYNJ2O15056 1496 aa12.77□□□□□ -0.37
HTT-203ENST00000506137 CFAP44Q96MT7 982 aa12.76□□□□□ -0.37
HTT-203ENST00000506137 RSPH6AQ9H0K4 717 aa12.76□□□□□ -0.37
HTT-203ENST00000506137 TICAM2Q86XR7 235 aa12.75□□□□□ -0.37
HTT-203ENST00000506137 HMGXB3Q12766 1538 aa12.72□□□□□ -0.37
HTT-203ENST00000506137 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.71□□□□□ -0.37
HTT-203ENST00000506137 PSMD1Q99460 953 aa12.69□□□□□ -0.38
HTT-203ENST00000506137 ZMYND15Q9H091 742 aa12.69□□□□□ -0.38
HTT-203ENST00000506137 ERICH6BQ5W0A0 696 aa12.67□□□□□ -0.38
HTT-203ENST00000506137 NAP1L5Q96NT1 182 aaPredicted RBP12.66□□□□□ -0.38
HTT-203ENST00000506137 TSHZ2Q9NRE2 1034 aa12.65□□□□□ -0.38
HTT-203ENST00000506137 CLSPNQ9HAW4 1339 aa12.64□□□□□ -0.39
HTT-203ENST00000506137 ZEB1P37275 1124 aaPredicted RBP12.63□□□□□ -0.39
HTT-203ENST00000506137 CC2D2BQ6DHV5 1058 aa12.63□□□□□ -0.39
HTT-203ENST00000506137 ATAD2BQ9ULI0 1458 aa12.63□□□□□ -0.39
HTT-203ENST00000506137 SPRYD3Q8NCJ5 442 aa12.61□□□□□ -0.39
HTT-203ENST00000506137 KIF13AQ9H1H9 1805 aa12.59□□□□□ -0.39
HTT-203ENST00000506137 CHD1O14646 1710 aa12.58□□□□□ -0.4
HTT-203ENST00000506137 SETQ01105 290 aaPredicted RBP12.57□□□□□ -0.4
HTT-203ENST00000506137 NECTIN2Q92692 538 aa12.57□□□□□ -0.4
HTT-203ENST00000506137 ADGRL1O94910 1474 aa12.57□□□□□ -0.4
HTT-203ENST00000506137 RAD21O60216 631 aa12.56□□□□□ -0.4
HTT-203ENST00000506137 KCTD17Q8N5Z5 321 aa12.56□□□□□ -0.4
HTT-203ENST00000506137 ANP32EQ9BTT0 268 aa12.56□□□□□ -0.4
HTT-203ENST00000506137 AAMPQ13685 434 aa12.54□□□□□ -0.4
HTT-203ENST00000506137 GLIPR1L2Q4G1C9 344 aa12.54□□□□□ -0.4
HTT-203ENST00000506137 NCLP19338 710 aaKnown RBP12.53□□□□□ -0.4
HTT-203ENST00000506137 BRPF1P55201 1214 aaPredicted RBP12.51□□□□□ -0.41
HTT-203ENST00000506137 ZNF592Q92610 1267 aa12.51□□□□□ -0.41
HTT-203ENST00000506137 CEP164Q9UPV0 1460 aa12.51□□□□□ -0.41
HTT-203ENST00000506137 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.5□□□□□ -0.41
HTT-203ENST00000506137 RGS22Q8NE09 1264 aa12.5□□□□□ -0.41
HTT-203ENST00000506137 KDM6BO15054 1643 aa12.5□□□□□ -0.41
HTT-203ENST00000506137 PTMSP20962 102 aa12.49□□□□□ -0.41
HTT-203ENST00000506137 DCAF1Q9Y4B6 1507 aa12.48□□□□□ -0.41
HTT-203ENST00000506137 ARID4BQ4LE39 1312 aaPredicted RBP12.48□□□□□ -0.41
HTT-203ENST00000506137 MYT1LQ9UL68 1186 aa12.46□□□□□ -0.41
HTT-203ENST00000506137 CADPSQ9ULU8 1353 aa12.43□□□□□ -0.42
HTT-203ENST00000506137 BAZ1BQ9UIG0 1483 aaKnown RBP12.43□□□□□ -0.42
HTT-203ENST00000506137 SMARCA4P51532 1647 aa12.42□□□□□ -0.42
HTT-203ENST00000506137 E9PSI1 815 aa12.41□□□□□ -0.42
HTT-203ENST00000506137 CERS3Q8IU89 383 aa12.41□□□□□ -0.42
HTT-203ENST00000506137 ZNF608Q9ULD9 1512 aaPredicted RBP12.41□□□□□ -0.42
HTT-203ENST00000506137 RBM25P49756 843 aaKnown RBP12.4□□□□□ -0.42
HTT-203ENST00000506137 PKD2Q13563 968 aa12.4□□□□□ -0.42
HTT-203ENST00000506137 ANO8Q9HCE9 1232 aaPredicted RBP12.4□□□□□ -0.42
HTT-203ENST00000506137 FAM177A1Q8N128 213 aaPredicted RBP12.39□□□□□ -0.43
HTT-203ENST00000506137 CCDC136Q96JN2 1154 aa12.39□□□□□ -0.43
HTT-203ENST00000506137 CANXP27824 592 aaKnown RBP12.38□□□□□ -0.43
HTT-203ENST00000506137 ZFP91Q96JP5 570 aaPredicted RBP12.38□□□□□ -0.43
HTT-203ENST00000506137 PLCD4Q9BRC7 762 aa12.38□□□□□ -0.43
HTT-203ENST00000506137 USP35Q9P2H5 1018 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms