RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 NPM1P06748 294 aaKnown RBP eCLIP14.56□□□□□ -0.08
SNF8-204ENST00000506104 JPH4Q96JJ6 628 aa14.56□□□□□ -0.08
SNF8-204ENST00000506104 TTBK1Q5TCY1 1321 aaPredicted RBP14.56□□□□□ -0.08
SNF8-204ENST00000506104 FAM69CQ0P6D2 419 aa14.51□□□□□ -0.09
SNF8-204ENST00000506104 TSPOAP1O95153 1857 aa14.5□□□□□ -0.09
SNF8-204ENST00000506104 RUSC2Q8N2Y8 1516 aa14.49□□□□□ -0.09
SNF8-204ENST00000506104 ADCY10Q96PN6 1610 aa14.42□□□□□ -0.1
SNF8-204ENST00000506104 KIF27Q86VH2 1401 aa14.41□□□□□ -0.1
SNF8-204ENST00000506104 CUL7Q14999 1698 aa14.4□□□□□ -0.1
SNF8-204ENST00000506104 ABCC10Q5T3U5 1492 aa14.39□□□□□ -0.11
SNF8-204ENST00000506104 DIP2BQ9P265 1576 aa14.39□□□□□ -0.11
SNF8-204ENST00000506104 KIAA0586Q9BVV6 1533 aa14.38□□□□□ -0.11
SNF8-204ENST00000506104 KDM6BO15054 1643 aa14.37□□□□□ -0.11
SNF8-204ENST00000506104 IGF1RP08069 1367 aa14.37□□□□□ -0.11
SNF8-204ENST00000506104 MAPKBP1O60336 1514 aa14.36□□□□□ -0.11
SNF8-204ENST00000506104 PTPRGP23470 1445 aa14.34□□□□□ -0.11
SNF8-204ENST00000506104 CARMIL1Q5VZK9 1371 aa14.33□□□□□ -0.12
SNF8-204ENST00000506104 CARMIL2Q6F5E8 1435 aa14.32□□□□□ -0.12
SNF8-204ENST00000506104 IQGAP2Q13576 1575 aa14.28□□□□□ -0.12
SNF8-204ENST00000506104 TNIKQ9UKE5 1360 aa14.28□□□□□ -0.12
SNF8-204ENST00000506104 ASXL2Q76L83 1435 aa14.24□□□□□ -0.13
SNF8-204ENST00000506104 ABCC2Q92887 1545 aa14.24□□□□□ -0.13
SNF8-204ENST00000506104 KDM4FA0A1W2PPD8 638 aa14.23□□□□□ -0.13
SNF8-204ENST00000506104 PLB1Q6P1J6 1458 aa14.2□□□□□ -0.14
SNF8-204ENST00000506104 UACAQ9BZF9 1416 aa14.2□□□□□ -0.14
SNF8-204ENST00000506104 PPRC1Q5VV67 1664 aaKnown RBP14.18□□□□□ -0.14
SNF8-204ENST00000506104 RAPGEF2Q9Y4G8 1499 aa14.18□□□□□ -0.14
SNF8-204ENST00000506104 ZCCHC11Q5TAX3 1644 aaKnown RBP14.17□□□□□ -0.14
SNF8-204ENST00000506104 DISP1Q96F81 1524 aa14.16□□□□□ -0.14
SNF8-204ENST00000506104 GLI2P10070 1586 aa14.15□□□□□ -0.14
SNF8-204ENST00000506104 KIAA0556O60303 1618 aa14.15□□□□□ -0.14
SNF8-204ENST00000506104 CTTNBP2Q8WZ74 1663 aa14.14□□□□□ -0.15
SNF8-204ENST00000506104 UHRF1BP1LA0JNW5 1464 aa14.14□□□□□ -0.15
SNF8-204ENST00000506104 KCNH8Q96L42 1107 aa14.14□□□□□ -0.15
SNF8-204ENST00000506104 ADGRL1O94910 1474 aa14.12□□□□□ -0.15
SNF8-204ENST00000506104 EPRSP07814 1512 aaKnown RBP14.12□□□□□ -0.15
SNF8-204ENST00000506104 ARID3CA6NKF2 412 aa14.12□□□□□ -0.15
SNF8-204ENST00000506104 MAP3K4Q9Y6R4 1608 aa14.12□□□□□ -0.15
SNF8-204ENST00000506104 UGGT2Q9NYU1 1516 aa14.11□□□□□ -0.15
SNF8-204ENST00000506104 TEX14Q8IWB6 1497 aa14.11□□□□□ -0.15
SNF8-204ENST00000506104 KDM5BQ9UGL1 1544 aa14.1□□□□□ -0.15
SNF8-204ENST00000506104 P3H3Q8IVL6 736 aa14.07□□□□□ -0.16
SNF8-204ENST00000506104 FAM9AQ8IZU1 332 aaPredicted RBP14.07□□□□□ -0.16
SNF8-204ENST00000506104 COL17A1Q9UMD9 1497 aaPredicted RBP14.06□□□□□ -0.16
SNF8-204ENST00000506104 WDR7Q9Y4E6 1490 aa14.06□□□□□ -0.16
SNF8-204ENST00000506104 GOLGA3Q08378 1498 aa14.05□□□□□ -0.16
SNF8-204ENST00000506104 RANGAP1P46060 587 aaPredicted RBP14.04□□□□□ -0.16
SNF8-204ENST00000506104 ILDR1Q86SU0 546 aaPredicted RBP14.03□□□□□ -0.16
SNF8-204ENST00000506104 CD109Q6YHK3 1445 aa14.02□□□□□ -0.16
SNF8-204ENST00000506104 CFAP43Q8NDM7 1665 aa14.01□□□□□ -0.17
SNF8-204ENST00000506104 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.01□□□□□ -0.17
SNF8-204ENST00000506104 HNRNPUL2Q1KMD3 747 aaKnown RBP14.01□□□□□ -0.17
SNF8-204ENST00000506104 HECW2Q9P2P5 1572 aa13.99□□□□□ -0.17
SNF8-204ENST00000506104 ABCA8O94911 1581 aa13.98□□□□□ -0.17
SNF8-204ENST00000506104 KIF21BO75037 1637 aa13.97□□□□□ -0.17
SNF8-204ENST00000506104 MAGI3Q5TCQ9 1506 aa13.93□□□□□ -0.18
SNF8-204ENST00000506104 PRXQ9BXM0 1461 aa13.91□□□□□ -0.18
SNF8-204ENST00000506104 ARID4BQ4LE39 1312 aaPredicted RBP13.9□□□□□ -0.19
SNF8-204ENST00000506104 PLPPR3Q6T4P5 718 aa13.89□□□□□ -0.19
SNF8-204ENST00000506104 EHMT2Q96KQ7 1210 aa13.89□□□□□ -0.19
SNF8-204ENST00000506104 ATP10BO94823 1461 aa13.88□□□□□ -0.19
SNF8-204ENST00000506104 RAPGEF6Q8TEU7 1601 aa13.88□□□□□ -0.19
SNF8-204ENST00000506104 RAPGEF3O95398 923 aa13.87□□□□□ -0.19
SNF8-204ENST00000506104 CSRNP3Q8WYN3 585 aa13.87□□□□□ -0.19
SNF8-204ENST00000506104 ABCA9Q8IUA7 1624 aa13.84□□□□□ -0.19
SNF8-204ENST00000506104 ARAP3Q8WWN8 1544 aa13.83□□□□□ -0.2
SNF8-204ENST00000506104 ATP1B4Q9UN42 357 aaPredicted RBP13.82□□□□□ -0.2
SNF8-204ENST00000506104 SAMD9Q5K651 1589 aa13.82□□□□□ -0.2
SNF8-204ENST00000506104 FHOD3Q2V2M9 1422 aa13.81□□□□□ -0.2
SNF8-204ENST00000506104 PLEKHD1A6NEE1 506 aa13.8□□□□□ -0.2
SNF8-204ENST00000506104 PTPRMP28827 1452 aa13.78□□□□□ -0.2
SNF8-204ENST00000506104 ADAMTSL3P82987 1691 aa13.77□□□□□ -0.21
SNF8-204ENST00000506104 BCORL1Q5H9F3 1711 aa13.77□□□□□ -0.21
SNF8-204ENST00000506104 RIMS1Q86UR5 1692 aaKnown RBP13.77□□□□□ -0.21
SNF8-204ENST00000506104 PHLDB1Q86UU1 1377 aa13.77□□□□□ -0.21
SNF8-204ENST00000506104 MADDQ8WXG6 1647 aa13.77□□□□□ -0.21
SNF8-204ENST00000506104 NEO1Q92859 1461 aa13.77□□□□□ -0.21
SNF8-204ENST00000506104 NUP153P49790 1475 aaKnown RBP13.76□□□□□ -0.21
SNF8-204ENST00000506104 MLECQ14165 292 aa13.75□□□□□ -0.21
SNF8-204ENST00000506104 FRMPD1Q5SYB0 1578 aa13.75□□□□□ -0.21
SNF8-204ENST00000506104 DENND4BO75064 1496 aaPredicted RBP13.73□□□□□ -0.21
SNF8-204ENST00000506104 CFAP74Q9C0B2 1584 aa13.72□□□□□ -0.21
SNF8-204ENST00000506104 UBTFP17480 764 aaKnown RBP13.72□□□□□ -0.21
SNF8-204ENST00000506104 FANCAO15360 1455 aa13.72□□□□□ -0.21
SNF8-204ENST00000506104 EEA1Q15075 1411 aa13.72□□□□□ -0.21
SNF8-204ENST00000506104 AKNAQ7Z591 1439 aa13.72□□□□□ -0.21
SNF8-204ENST00000506104 RICTORQ6R327 1708 aa13.71□□□□□ -0.21
SNF8-204ENST00000506104 MYT1LQ9UL68 1186 aa13.71□□□□□ -0.21
SNF8-204ENST00000506104 TTC37Q6PGP7 1564 aa13.71□□□□□ -0.22
SNF8-204ENST00000506104 ARHGEF40Q8TER5 1519 aa13.7□□□□□ -0.22
SNF8-204ENST00000506104 CDK13Q14004 1512 aaKnown RBP13.69□□□□□ -0.22
SNF8-204ENST00000506104 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.69□□□□□ -0.22
SNF8-204ENST00000506104 FBXO41Q8TF61 875 aa13.69□□□□□ -0.22
SNF8-204ENST00000506104 PCF11O94913 1555 aaKnown RBP13.68□□□□□ -0.22
SNF8-204ENST00000506104 HSPA2P54652 639 aa13.68□□□□□ -0.22
SNF8-204ENST00000506104 POGZQ7Z3K3 1410 aa13.67□□□□□ -0.22
SNF8-204ENST00000506104 EFCAB5A4FU69 1503 aa13.67□□□□□ -0.22
SNF8-204ENST00000506104 ZFYVE16Q7Z3T8 1539 aa13.67□□□□□ -0.22
SNF8-204ENST00000506104 FER1L4A9Z1Z3 1794 aa13.66□□□□□ -0.22
SNF8-204ENST00000506104 MYO5CQ9NQX4 1742 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms