RNA–Protein interactions for RNA: ENST00000505964.1

SGCA-205, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-205ENST00000505964 TSPOAP1O95153 1857 aa18.78■□□□□ 0.6
SGCA-205ENST00000505964 EEA1Q15075 1411 aa18.77■□□□□ 0.6
SGCA-205ENST00000505964 FAM69CQ0P6D2 419 aa18.75■□□□□ 0.59
SGCA-205ENST00000505964 JPH4Q96JJ6 628 aa18.75■□□□□ 0.59
SGCA-205ENST00000505964 RUSC2Q8N2Y8 1516 aa18.74■□□□□ 0.59
SGCA-205ENST00000505964 DIP2BQ9P265 1576 aa18.73■□□□□ 0.59
SGCA-205ENST00000505964 ABCC10Q5T3U5 1492 aa18.72■□□□□ 0.59
SGCA-205ENST00000505964 ADCY10Q96PN6 1610 aa18.72■□□□□ 0.59
SGCA-205ENST00000505964 KIF27Q86VH2 1401 aa18.69■□□□□ 0.58
SGCA-205ENST00000505964 KDM6BO15054 1643 aa18.68■□□□□ 0.58
SGCA-205ENST00000505964 MAPKBP1O60336 1514 aa18.68■□□□□ 0.58
SGCA-205ENST00000505964 NPM1P06748 294 aaKnown RBP eCLIP18.67■□□□□ 0.58
SGCA-205ENST00000505964 KDM4FA0A1W2PPD8 638 aa18.63■□□□□ 0.57
SGCA-205ENST00000505964 FAM9AQ8IZU1 332 aaPredicted RBP18.59■□□□□ 0.57
SGCA-205ENST00000505964 CSRNP3Q8WYN3 585 aa18.59■□□□□ 0.57
SGCA-205ENST00000505964 KIF21BO75037 1637 aa18.55■□□□□ 0.56
SGCA-205ENST00000505964 TTBK1Q5TCY1 1321 aaPredicted RBP18.54■□□□□ 0.56
SGCA-205ENST00000505964 CUL7Q14999 1698 aa18.53■□□□□ 0.56
SGCA-205ENST00000505964 KIAA0586Q9BVV6 1533 aa18.53■□□□□ 0.56
SGCA-205ENST00000505964 IGF1RP08069 1367 aa18.51■□□□□ 0.55
SGCA-205ENST00000505964 PPRC1Q5VV67 1664 aaKnown RBP18.5■□□□□ 0.55
SGCA-205ENST00000505964 ILDR1Q86SU0 546 aaPredicted RBP18.49■□□□□ 0.55
SGCA-205ENST00000505964 PRXQ9BXM0 1461 aa18.49■□□□□ 0.55
SGCA-205ENST00000505964 PTPRGP23470 1445 aa18.45■□□□□ 0.54
SGCA-205ENST00000505964 GOLGA3Q08378 1498 aa18.45■□□□□ 0.54
SGCA-205ENST00000505964 CARMIL1Q5VZK9 1371 aa18.42■□□□□ 0.54
SGCA-205ENST00000505964 ADGRL1O94910 1474 aa18.41■□□□□ 0.54
SGCA-205ENST00000505964 ABCC2Q92887 1545 aa18.41■□□□□ 0.54
SGCA-205ENST00000505964 ASXL2Q76L83 1435 aa18.4■□□□□ 0.54
SGCA-205ENST00000505964 RAPGEF2Q9Y4G8 1499 aa18.4■□□□□ 0.54
SGCA-205ENST00000505964 LOC105371045A0A1W2PR82 267 aa18.39■□□□□ 0.53
SGCA-205ENST00000505964 GLI2P10070 1586 aa18.38■□□□□ 0.53
SGCA-205ENST00000505964 TNIKQ9UKE5 1360 aa18.37■□□□□ 0.53
SGCA-205ENST00000505964 IQGAP2Q13576 1575 aa18.36■□□□□ 0.53
SGCA-205ENST00000505964 CARMIL2Q6F5E8 1435 aa18.36■□□□□ 0.53
SGCA-205ENST00000505964 PLB1Q6P1J6 1458 aa18.36■□□□□ 0.53
SGCA-205ENST00000505964 COL17A1Q9UMD9 1497 aaPredicted RBP18.33■□□□□ 0.53
SGCA-205ENST00000505964 MAP3K4Q9Y6R4 1608 aa18.33■□□□□ 0.52
SGCA-205ENST00000505964 HECW2Q9P2P5 1572 aa18.32■□□□□ 0.52
SGCA-205ENST00000505964 ZCCHC11Q5TAX3 1644 aaKnown RBP18.31■□□□□ 0.52
SGCA-205ENST00000505964 EPRSP07814 1512 aaKnown RBP18.29■□□□□ 0.52
SGCA-205ENST00000505964 CTTNBP2Q8WZ74 1663 aa18.29■□□□□ 0.52
SGCA-205ENST00000505964 UHRF1BP1LA0JNW5 1464 aa18.29■□□□□ 0.52
SGCA-205ENST00000505964 UACAQ9BZF9 1416 aa18.29■□□□□ 0.52
SGCA-205ENST00000505964 DISP1Q96F81 1524 aa18.28■□□□□ 0.52
SGCA-205ENST00000505964 UBTFP17480 764 aaKnown RBP18.27■□□□□ 0.52
SGCA-205ENST00000505964 EHMT2Q96KQ7 1210 aa18.25■□□□□ 0.51
SGCA-205ENST00000505964 KDM5BQ9UGL1 1544 aa18.24■□□□□ 0.51
SGCA-205ENST00000505964 TEX14Q8IWB6 1497 aa18.23■□□□□ 0.51
SGCA-205ENST00000505964 KIAA0556O60303 1618 aa18.2■□□□□ 0.5
SGCA-205ENST00000505964 UGGT2Q9NYU1 1516 aa18.18■□□□□ 0.5
SGCA-205ENST00000505964 CEP162Q5TB80 1403 aa18.16■□□□□ 0.5
SGCA-205ENST00000505964 WDR7Q9Y4E6 1490 aa18.15■□□□□ 0.5
SGCA-205ENST00000505964 CFAP43Q8NDM7 1665 aa18.13■□□□□ 0.49
SGCA-205ENST00000505964 CLIP1P30622 1438 aa18.09■□□□□ 0.49
SGCA-205ENST00000505964 KCNH8Q96L42 1107 aa18.09■□□□□ 0.49
SGCA-205ENST00000505964 CD109Q6YHK3 1445 aa18.08■□□□□ 0.49
SGCA-205ENST00000505964 EFCAB5A4FU69 1503 aa18.08■□□□□ 0.48
SGCA-205ENST00000505964 MAGI3Q5TCQ9 1506 aa18.05■□□□□ 0.48
SGCA-205ENST00000505964 ABCA8O94911 1581 aa18.04■□□□□ 0.48
SGCA-205ENST00000505964 SAMD9Q5K651 1589 aa18.04■□□□□ 0.48
SGCA-205ENST00000505964 ARHGAP35Q9NRY4 1499 aa18.02■□□□□ 0.48
SGCA-205ENST00000505964 ARID3CA6NKF2 412 aa17.99■□□□□ 0.47
SGCA-205ENST00000505964 RANGAP1P46060 587 aaPredicted RBP17.95■□□□□ 0.46
SGCA-205ENST00000505964 ADAMTSL3P82987 1691 aa17.94■□□□□ 0.46
SGCA-205ENST00000505964 FBXO41Q8TF61 875 aa17.94■□□□□ 0.46
SGCA-205ENST00000505964 ARAP3Q8WWN8 1544 aa17.93■□□□□ 0.46
SGCA-205ENST00000505964 VPS8Q8N3P4 1428 aa17.92■□□□□ 0.46
SGCA-205ENST00000505964 PTPRMP28827 1452 aa17.92■□□□□ 0.46
SGCA-205ENST00000505964 ABCA9Q8IUA7 1624 aa17.9■□□□□ 0.46
SGCA-205ENST00000505964 P3H3Q8IVL6 736 aa17.89■□□□□ 0.45
SGCA-205ENST00000505964 MADDQ8WXG6 1647 aa17.89■□□□□ 0.45
SGCA-205ENST00000505964 BCORL1Q5H9F3 1711 aa17.89■□□□□ 0.45
SGCA-205ENST00000505964 FHOD3Q2V2M9 1422 aa17.88■□□□□ 0.45
SGCA-205ENST00000505964 ATP10BO94823 1461 aa17.88■□□□□ 0.45
SGCA-205ENST00000505964 RAPGEF3O95398 923 aa17.87■□□□□ 0.45
SGCA-205ENST00000505964 FMN1Q68DA7 1419 aa17.86■□□□□ 0.45
SGCA-205ENST00000505964 FRMPD1Q5SYB0 1578 aa17.85■□□□□ 0.45
SGCA-205ENST00000505964 RIMS1Q86UR5 1692 aaKnown RBP17.84■□□□□ 0.45
SGCA-205ENST00000505964 PCF11O94913 1555 aaKnown RBP17.83■□□□□ 0.45
SGCA-205ENST00000505964 ARID4BQ4LE39 1312 aaPredicted RBP17.82■□□□□ 0.44
SGCA-205ENST00000505964 RAPGEF6Q8TEU7 1601 aa17.81■□□□□ 0.44
SGCA-205ENST00000505964 LMTK3Q96Q04 1460 aa17.8■□□□□ 0.44
SGCA-205ENST00000505964 FYCO1Q9BQS8 1478 aa17.79■□□□□ 0.44
SGCA-205ENST00000505964 NEO1Q92859 1461 aa17.78■□□□□ 0.44
SGCA-205ENST00000505964 CASKIN1Q8WXD9 1431 aa17.78■□□□□ 0.44
SGCA-205ENST00000505964 PHLDB1Q86UU1 1377 aa17.78■□□□□ 0.44
SGCA-205ENST00000505964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.77■□□□□ 0.44
SGCA-205ENST00000505964 HNRNPUL2Q1KMD3 747 aaKnown RBP17.77■□□□□ 0.44
SGCA-205ENST00000505964 PLPPR3Q6T4P5 718 aa17.77■□□□□ 0.44
SGCA-205ENST00000505964 RICTORQ6R327 1708 aa17.77■□□□□ 0.44
SGCA-205ENST00000505964 ARHGEF40Q8TER5 1519 aa17.76■□□□□ 0.43
SGCA-205ENST00000505964 MAP3K1Q13233 1512 aa17.75■□□□□ 0.43
SGCA-205ENST00000505964 HECW1Q76N89 1606 aa17.74■□□□□ 0.43
SGCA-205ENST00000505964 SIGLEC1Q9BZZ2 1709 aa17.74■□□□□ 0.43
SGCA-205ENST00000505964 HSPA2P54652 639 aa17.73■□□□□ 0.43
SGCA-205ENST00000505964 LRRIQ1Q96JM4 1722 aa17.72■□□□□ 0.43
SGCA-205ENST00000505964 NUP153P49790 1475 aaKnown RBP17.7■□□□□ 0.42
SGCA-205ENST00000505964 APLP2Q06481 763 aa17.69■□□□□ 0.42
SGCA-205ENST00000505964 TIAM1Q13009 1591 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms