RNA–Protein interactions for RNA: ENST00000505881.5

CPNE4-205, Transcript of copine 4, humanhuman

TSL 4

Gene CPNE4, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-205ENST00000505881 PKD2Q13563 968 aa9.37□□□□□ -0.91
CPNE4-205ENST00000505881 CHADLQ6NUI6 762 aa9.37□□□□□ -0.91
CPNE4-205ENST00000505881 ERCC6Q03468 1493 aa9.34□□□□□ -0.91
CPNE4-205ENST00000505881 PRKAR2AP13861 404 aaKnown RBP9.34□□□□□ -0.91
CPNE4-205ENST00000505881 NUBP1P53384 320 aa9.34□□□□□ -0.91
CPNE4-205ENST00000505881 PIP4P2Q8N4L2 257 aa9.32□□□□□ -0.92
CPNE4-205ENST00000505881 NPM1P06748 294 aaKnown RBP eCLIP9.3□□□□□ -0.92
CPNE4-205ENST00000505881 CIZ1Q9ULV3 898 aaPredicted RBP9.3□□□□□ -0.92
CPNE4-205ENST00000505881 FARP1Q9Y4F1 1045 aaPredicted RBP9.3□□□□□ -0.92
CPNE4-205ENST00000505881 ECM2O94769 699 aaPredicted RBP9.28□□□□□ -0.92
CPNE4-205ENST00000505881 MYO15BQ96JP2 1530 aa9.27□□□□□ -0.93
CPNE4-205ENST00000505881 GSE1Q14687 1217 aa9.27□□□□□ -0.93
CPNE4-205ENST00000505881 RASEFQ8IZ41 740 aa9.27□□□□□ -0.93
CPNE4-205ENST00000505881 FAM212AQ96EL1 285 aa9.26□□□□□ -0.93
CPNE4-205ENST00000505881 DCAF8Q5TAQ9 597 aa9.23□□□□□ -0.93
CPNE4-205ENST00000505881 SCRIBQ14160 1630 aa9.21□□□□□ -0.93
CPNE4-205ENST00000505881 RGL2O15211 777 aa9.19□□□□□ -0.94
CPNE4-205ENST00000505881 TSPYL2Q9H2G4 693 aaPredicted RBP9.16□□□□□ -0.94
CPNE4-205ENST00000505881 POTEHQ6S545 545 aa9.13□□□□□ -0.95
CPNE4-205ENST00000505881 RNF25Q96BH1 459 aaPredicted RBP9.13□□□□□ -0.95
CPNE4-205ENST00000505881 PAK3O75914 559 aaPredicted RBP9.12□□□□□ -0.95
CPNE4-205ENST00000505881 PYGBP11216 843 aa9.12□□□□□ -0.95
CPNE4-205ENST00000505881 CHRM1P11229 460 aaPredicted RBP9.12□□□□□ -0.95
CPNE4-205ENST00000505881 CCDC61Q9Y6R9 512 aa9.1□□□□□ -0.95
CPNE4-205ENST00000505881 THOC2Q8NI27 1593 aaKnown RBP9.09□□□□□ -0.95
CPNE4-205ENST00000505881 CD44P16070 742 aaKnown RBP9.09□□□□□ -0.95
CPNE4-205ENST00000505881 NESP48681 1621 aa9.09□□□□□ -0.95
CPNE4-205ENST00000505881 RIOK3O14730 519 aaKnown RBP9.08□□□□□ -0.96
CPNE4-205ENST00000505881 C19orf67A6NJJ6 358 aa9.05□□□□□ -0.96
CPNE4-205ENST00000505881 ZRANB1Q9UGI0 708 aa9.05□□□□□ -0.96
CPNE4-205ENST00000505881 TAOK2Q9UL54 1235 aa9.03□□□□□ -0.96
CPNE4-205ENST00000505881 VGFO15240 615 aaPredicted RBP9.02□□□□□ -0.97
CPNE4-205ENST00000505881 CHGAP10645 457 aaKnown RBP9.01□□□□□ -0.97
CPNE4-205ENST00000505881 HS6ST3Q8IZP7 471 aa9.01□□□□□ -0.97
CPNE4-205ENST00000505881 SMARCA2P51531 1590 aa9□□□□□ -0.97
CPNE4-205ENST00000505881 BAZ1AQ9NRL2 1556 aaPredicted RBP9□□□□□ -0.97
CPNE4-205ENST00000505881 ZNF467Q7Z7K2 595 aaPredicted RBP9□□□□□ -0.97
CPNE4-205ENST00000505881 KIF12Q96FN5 646 aa9□□□□□ -0.97
CPNE4-205ENST00000505881 ZNF579Q8NAF0 562 aaKnown RBP8.99□□□□□ -0.97
CPNE4-205ENST00000505881 PHF12Q96QT6 1004 aa8.99□□□□□ -0.97
CPNE4-205ENST00000505881 RIMBP3CA6NJZ7 1639 aa8.98□□□□□ -0.97
CPNE4-205ENST00000505881 RIMBP3BA6NNM3 1639 aa8.98□□□□□ -0.97
CPNE4-205ENST00000505881 RIMBP3Q9UFD9 1639 aa8.98□□□□□ -0.97
CPNE4-205ENST00000505881 MAP3K13O43283 966 aa8.98□□□□□ -0.97
CPNE4-205ENST00000505881 BBXQ8WY36 941 aaPredicted RBP8.98□□□□□ -0.97
CPNE4-205ENST00000505881 SGIP1Q9BQI5 828 aa8.98□□□□□ -0.97
CPNE4-205ENST00000505881 PCDHB13Q9Y5F0 798 aa8.98□□□□□ -0.97
CPNE4-205ENST00000505881 KIF21AQ7Z4S6 1674 aa8.97□□□□□ -0.97
CPNE4-205ENST00000505881 PCDHB8Q9UN66 801 aa8.97□□□□□ -0.97
CPNE4-205ENST00000505881 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.96□□□□□ -0.98
CPNE4-205ENST00000505881 ZFP91Q96JP5 570 aaPredicted RBP8.96□□□□□ -0.98
CPNE4-205ENST00000505881 HAX1O00165 279 aa8.95□□□□□ -0.98
CPNE4-205ENST00000505881 STK25O00506 426 aa8.95□□□□□ -0.98
CPNE4-205ENST00000505881 ILDR1Q86SU0 546 aaPredicted RBP8.95□□□□□ -0.98
CPNE4-205ENST00000505881 IFNL1Q8IU54 200 aa8.95□□□□□ -0.98
CPNE4-205ENST00000505881 PLCB2Q00722 1185 aa8.94□□□□□ -0.98
CPNE4-205ENST00000505881 PDAP1Q13442 181 aaKnown RBP8.93□□□□□ -0.98
CPNE4-205ENST00000505881 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.93□□□□□ -0.98
CPNE4-205ENST00000505881 NCAPD3P42695 1498 aa8.93□□□□□ -0.98
CPNE4-205ENST00000505881 DCAF1Q9Y4B6 1507 aa8.93□□□□□ -0.98
CPNE4-205ENST00000505881 BCL11BQ9C0K0 894 aaPredicted RBP8.92□□□□□ -0.98
CPNE4-205ENST00000505881 EVX2Q03828 476 aa8.91□□□□□ -0.98
CPNE4-205ENST00000505881 STK24Q9Y6E0 443 aa8.91□□□□□ -0.98
CPNE4-205ENST00000505881 PSEN1P49768 467 aa8.9□□□□□ -0.98
CPNE4-205ENST00000505881 MS4A3Q96HJ5 214 aa8.9□□□□□ -0.98
CPNE4-205ENST00000505881 ZCCHC6Q5VYS8 1495 aaKnown RBP8.89□□□□□ -0.99
CPNE4-205ENST00000505881 NKX1-1Q15270 411 aaPredicted RBP8.87□□□□□ -0.99
CPNE4-205ENST00000505881 CYB5RLQ6IPT4 315 aa8.86□□□□□ -0.99
CPNE4-205ENST00000505881 PAXIP1Q6ZW49 1069 aaPredicted RBP8.86□□□□□ -0.99
CPNE4-205ENST00000505881 LAMC3Q9Y6N6 1575 aa8.86□□□□□ -0.99
CPNE4-205ENST00000505881 ARHGEF11O15085 1522 aa8.85□□□□□ -0.99
CPNE4-205ENST00000505881 SPRYD3Q8NCJ5 442 aa8.84□□□□□ -0.99
CPNE4-205ENST00000505881 CFAP44Q96MT7 982 aa8.84□□□□□ -0.99
CPNE4-205ENST00000505881 TRPC6Q9Y210 931 aa8.84□□□□□ -0.99
CPNE4-205ENST00000505881 ATAD2BQ9ULI0 1458 aa8.83□□□□□ -1
CPNE4-205ENST00000505881 CLCN6P51797 869 aa8.83□□□□□ -1
CPNE4-205ENST00000505881 PDS5BQ9NTI5 1447 aa8.82□□□□□ -1
CPNE4-205ENST00000505881 GALR2O43603 387 aaPredicted RBP8.82□□□□□ -1
CPNE4-205ENST00000505881 HMGXB3Q12766 1538 aa8.81□□□□□ -1
CPNE4-205ENST00000505881 HAP1P54257 671 aaPredicted RBP8.8□□□□□ -1
CPNE4-205ENST00000505881 TMEM106CQ9BVX2 250 aa8.8□□□□□ -1
CPNE4-205ENST00000505881 MRC2Q9UBG0 1479 aa8.79□□□□□ -1
CPNE4-205ENST00000505881 TIE1P35590 1138 aa8.79□□□□□ -1
CPNE4-205ENST00000505881 CABP2Q9NPB3 220 aa8.79□□□□□ -1
CPNE4-205ENST00000505881 WDR62O43379 1518 aa8.79□□□□□ -1
CPNE4-205ENST00000505881 GTPBP6O43824 516 aaPredicted RBP8.78□□□□□ -1
CPNE4-205ENST00000505881 BMP2KQ9NSY1 1161 aaPredicted RBP8.77□□□□□ -1.01
CPNE4-205ENST00000505881 TTLL13PA6NNM8 815 aa8.76□□□□□ -1.01
CPNE4-205ENST00000505881 EFCAB3Q8N7B9 438 aa8.76□□□□□ -1.01
CPNE4-205ENST00000505881 RYDENQ9NUL5 291 aaKnown RBP8.76□□□□□ -1.01
CPNE4-205ENST00000505881 MFRPQ9BY79 579 aa8.75□□□□□ -1.01
CPNE4-205ENST00000505881 GABBR2O75899 941 aa8.74□□□□□ -1.01
CPNE4-205ENST00000505881 BAZ1BQ9UIG0 1483 aaKnown RBP8.73□□□□□ -1.01
CPNE4-205ENST00000505881 SOX12O15370 315 aa8.72□□□□□ -1.01
CPNE4-205ENST00000505881 GOLGA2Q08379 1002 aa8.72□□□□□ -1.01
CPNE4-205ENST00000505881 ARAP1Q96P48 1450 aa8.71□□□□□ -1.01
CPNE4-205ENST00000505881 DAXXQ9UER7 740 aaPredicted RBP8.71□□□□□ -1.02
CPNE4-205ENST00000505881 FBXO22Q8NEZ5 403 aa8.7□□□□□ -1.02
CPNE4-205ENST00000505881 TSHZ2Q9NRE2 1034 aa8.7□□□□□ -1.02
CPNE4-205ENST00000505881 PHF8Q9UPP1 1060 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms