RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 PBRM1Q86U86 1689 aa26.24■■□□□ 1.79
TRAPPC11-204ENST00000505676 AQRO60306 1485 aaKnown RBP eCLIP26.22■■□□□ 1.794e-6■■■□□ 18.2
TRAPPC11-204ENST00000505676 GRIN2BQ13224 1484 aa26.2■■□□□ 1.79
TRAPPC11-204ENST00000505676 TIAM1Q13009 1591 aa26.18■■□□□ 1.78
TRAPPC11-204ENST00000505676 ERCC6Q03468 1493 aa26.17■■□□□ 1.78
TRAPPC11-204ENST00000505676 ADAMTS12P58397 1594 aa26.16■■□□□ 1.78
TRAPPC11-204ENST00000505676 FYCO1Q9BQS8 1478 aa26.15■■□□□ 1.78
TRAPPC11-204ENST00000505676 FMN1Q68DA7 1419 aa26.15■■□□□ 1.78
TRAPPC11-204ENST00000505676 SAMD9Q5K651 1589 aa26.14■■□□□ 1.77
TRAPPC11-204ENST00000505676 CCER1Q8TC90 406 aaPredicted RBP26.13■■□□□ 1.77
TRAPPC11-204ENST00000505676 RRBP1Q9P2E9 1410 aaKnown RBP26.12■■□□□ 1.77
TRAPPC11-204ENST00000505676 CFAP43Q8NDM7 1665 aa26.11■■□□□ 1.77
TRAPPC11-204ENST00000505676 THOC2Q8NI27 1593 aaKnown RBP26.11■■□□□ 1.77
TRAPPC11-204ENST00000505676 CASKIN1Q8WXD9 1431 aa26.11■■□□□ 1.77
TRAPPC11-204ENST00000505676 PCF11O94913 1555 aaKnown RBP26.08■■□□□ 1.77
TRAPPC11-204ENST00000505676 KANK4Q5T7N3 995 aaPredicted RBP26.07■■□□□ 1.76
TRAPPC11-204ENST00000505676 FHOD3Q2V2M9 1422 aa26.05■■□□□ 1.76
TRAPPC11-204ENST00000505676 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.05■■□□□ 1.76
TRAPPC11-204ENST00000505676 LRRC9Q6ZRR7 1453 aa26.04■■□□□ 1.76
TRAPPC11-204ENST00000505676 IQGAP2Q13576 1575 aa25.99■■□□□ 1.75
TRAPPC11-204ENST00000505676 EIF4G3O43432 1585 aaKnown RBP25.97■■□□□ 1.75
TRAPPC11-204ENST00000505676 CCNB3Q8WWL7 1395 aa25.97■■□□□ 1.75
TRAPPC11-204ENST00000505676 ZNF608Q9ULD9 1512 aaPredicted RBP25.97■■□□□ 1.75
TRAPPC11-204ENST00000505676 SNAPC4Q5SXM2 1469 aa25.96■■□□□ 1.75
TRAPPC11-204ENST00000505676 MAGI1Q96QZ7 1491 aaPredicted RBP25.96■■□□□ 1.75
TRAPPC11-204ENST00000505676 HNRNPUL2Q1KMD3 747 aaKnown RBP25.92■■□□□ 1.74
TRAPPC11-204ENST00000505676 UGGT2Q9NYU1 1516 aa25.91■■□□□ 1.74
TRAPPC11-204ENST00000505676 P3H3Q8IVL6 736 aa25.9■■□□□ 1.74
TRAPPC11-204ENST00000505676 KIAA0586Q9BVV6 1533 aa25.88■■□□□ 1.73
TRAPPC11-204ENST00000505676 GRIN2AQ12879 1464 aa25.86■■□□□ 1.73
TRAPPC11-204ENST00000505676 CLSPNQ9HAW4 1339 aa25.84■■□□□ 1.73
TRAPPC11-204ENST00000505676 CCDC18Q5T9S5 1454 aa25.84■■□□□ 1.73
TRAPPC11-204ENST00000505676 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.83■■□□□ 1.73
TRAPPC11-204ENST00000505676 SYNJ2O15056 1496 aa25.82■■□□□ 1.72
TRAPPC11-204ENST00000505676 HECW1Q76N89 1606 aa25.79■■□□□ 1.72
TRAPPC11-204ENST00000505676 PHLDB1Q86UU1 1377 aa25.76■■□□□ 1.71
TRAPPC11-204ENST00000505676 EHBP1L1Q8N3D4 1523 aa25.76■■□□□ 1.71
TRAPPC11-204ENST00000505676 ATP1B4Q9UN42 357 aaPredicted RBP25.75■■□□□ 1.71
TRAPPC11-204ENST00000505676 MTUS2Q5JR59 1369 aa25.72■■□□□ 1.71
TRAPPC11-204ENST00000505676 KIAA0556O60303 1618 aa25.71■■□□□ 1.71
TRAPPC11-204ENST00000505676 SUPT6HQ7KZ85 1726 aaKnown RBP25.68■■□□□ 1.7
TRAPPC11-204ENST00000505676 NUP160Q12769 1436 aa25.67■■□□□ 1.7
TRAPPC11-204ENST00000505676 LRRIQ1Q96JM4 1722 aa25.67■■□□□ 1.7
TRAPPC11-204ENST00000505676 CHMP7Q8WUX9 453 aaPredicted RBP25.66■■□□□ 1.7
TRAPPC11-204ENST00000505676 DISP1Q96F81 1524 aa25.65■■□□□ 1.7
TRAPPC11-204ENST00000505676 CEP170Q5SW79 1584 aa25.62■■□□□ 1.69
TRAPPC11-204ENST00000505676 FGD6Q6ZV73 1430 aa25.62■■□□□ 1.69
TRAPPC11-204ENST00000505676 EPRSP07814 1512 aaKnown RBP25.62■■□□□ 1.69
TRAPPC11-204ENST00000505676 DHX57Q6P158 1386 aaKnown RBP25.62■■□□□ 1.69
TRAPPC11-204ENST00000505676 ARHGEF11O15085 1522 aa25.61■■□□□ 1.69
TRAPPC11-204ENST00000505676 NCOA2Q15596 1464 aa25.59■■□□□ 1.69
TRAPPC11-204ENST00000505676 MYOM3Q5VTT5 1437 aa25.58■■□□□ 1.69
TRAPPC11-204ENST00000505676 CARMIL2Q6F5E8 1435 aa25.57■■□□□ 1.68
TRAPPC11-204ENST00000505676 SETD5Q9C0A6 1442 aa25.56■■□□□ 1.68
TRAPPC11-204ENST00000505676 FAM50AQ14320 339 aaKnown RBP25.53■■□□□ 1.68
TRAPPC11-204ENST00000505676 RAPGEF6Q8TEU7 1601 aa25.52■■□□□ 1.68
TRAPPC11-204ENST00000505676 RAB3GAP2Q9H2M9 1393 aa25.5■■□□□ 1.67
TRAPPC11-204ENST00000505676 MAGI3Q5TCQ9 1506 aa25.48■■□□□ 1.67
TRAPPC11-204ENST00000505676 MIA2Q96PC5 1412 aa25.47■■□□□ 1.67
TRAPPC11-204ENST00000505676 TCOF1Q13428 1488 aaKnown RBP25.47■■□□□ 1.67
TRAPPC11-204ENST00000505676 ITGAEP38570 1179 aa25.45■■□□□ 1.66
TRAPPC11-204ENST00000505676 CDK11AQ9UQ88 783 aaPredicted RBP25.44■■□□□ 1.66
TRAPPC11-204ENST00000505676 NUP153P49790 1475 aaKnown RBP25.44■■□□□ 1.66
TRAPPC11-204ENST00000505676 CDK13Q14004 1512 aaKnown RBP25.43■■□□□ 1.66
TRAPPC11-204ENST00000505676 JPH4Q96JJ6 628 aa25.43■■□□□ 1.66
TRAPPC11-204ENST00000505676 PTPN23Q9H3S7 1636 aa25.43■■□□□ 1.66
TRAPPC11-204ENST00000505676 FBLN2P98095 1184 aa25.41■■□□□ 1.66
TRAPPC11-204ENST00000505676 HFM1A2PYH4 1435 aa25.37■■□□□ 1.65
TRAPPC11-204ENST00000505676 AKNAQ7Z591 1439 aa25.35■■□□□ 1.65
TRAPPC11-204ENST00000505676 ZNF316A6NFI3 1004 aaPredicted RBP25.35■■□□□ 1.65
TRAPPC11-204ENST00000505676 ACIN1Q9UKV3 1341 aaKnown RBP25.33■■□□□ 1.65
TRAPPC11-204ENST00000505676 TROQ12816 1431 aaPredicted RBP25.31■■□□□ 1.64
TRAPPC11-204ENST00000505676 ABCA8O94911 1581 aa25.3■■□□□ 1.64
TRAPPC11-204ENST00000505676 ADCY10Q96PN6 1610 aa25.29■■□□□ 1.64
TRAPPC11-204ENST00000505676 MAPKBP1O60336 1514 aa25.29■■□□□ 1.64
TRAPPC11-204ENST00000505676 CHD1O14646 1710 aa25.27■■□□□ 1.64
TRAPPC11-204ENST00000505676 PLB1Q6P1J6 1458 aa25.26■■□□□ 1.63
TRAPPC11-204ENST00000505676 SHROOM2Q13796 1616 aa25.25■■□□□ 1.63
TRAPPC11-204ENST00000505676 TIMELESSQ9UNS1 1208 aa25.25■■□□□ 1.63
TRAPPC11-204ENST00000505676 PTPRKQ15262 1439 aa25.24■■□□□ 1.63
TRAPPC11-204ENST00000505676 ITSN2Q9NZM3 1697 aa25.23■■□□□ 1.63
TRAPPC11-204ENST00000505676 NAIPQ13075 1403 aa25.22■■□□□ 1.63
TRAPPC11-204ENST00000505676 PRG4Q92954 1404 aaPredicted RBP25.22■■□□□ 1.63
TRAPPC11-204ENST00000505676 UACAQ9BZF9 1416 aa25.22■■□□□ 1.63
TRAPPC11-204ENST00000505676 GCC2Q8IWJ2 1684 aa25.21■■□□□ 1.63
TRAPPC11-204ENST00000505676 DIEXFQ68CQ4 756 aaKnown RBP25.2■■□□□ 1.62
TRAPPC11-204ENST00000505676 ROCK1Q13464 1354 aa25.17■■□□□ 1.62
TRAPPC11-204ENST00000505676 PTPRGP23470 1445 aa25.16■■□□□ 1.62
TRAPPC11-204ENST00000505676 DNMT1P26358 1616 aaKnown RBP25.15■■□□□ 1.62
TRAPPC11-204ENST00000505676 KIF14Q15058 1648 aa25.12■■□□□ 1.61
TRAPPC11-204ENST00000505676 ATP10BO94823 1461 aa25.11■■□□□ 1.61
TRAPPC11-204ENST00000505676 DAPK1P53355 1430 aa25.1■■□□□ 1.61
TRAPPC11-204ENST00000505676 PLEKHD1A6NEE1 506 aa25.1■■□□□ 1.61
TRAPPC11-204ENST00000505676 ARID3CA6NKF2 412 aa25.09■■□□□ 1.61
TRAPPC11-204ENST00000505676 GPATCH8Q9UKJ3 1502 aaKnown RBP25.08■■□□□ 1.61
TRAPPC11-204ENST00000505676 CLASP1Q7Z460 1538 aa25.06■■□□□ 1.6
TRAPPC11-204ENST00000505676 ABCC5O15440 1437 aa25.04■■□□□ 1.6
TRAPPC11-204ENST00000505676 CAMSAP2Q08AD1 1489 aa25.03■■□□□ 1.6
TRAPPC11-204ENST00000505676 ABCC10Q5T3U5 1492 aa25.02■■□□□ 1.6
TRAPPC11-204ENST00000505676 CFDP1Q9UEE9 299 aaPredicted RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms