RNA–Protein interactions for RNA: ENST00000505450.5

PROM1-206, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,349 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-206ENST00000505450 DHX57Q6P158 1386 aaKnown RBP11.09□□□□□ -0.63
PROM1-206ENST00000505450 ARID4BQ4LE39 1312 aaPredicted RBP11.07□□□□□ -0.64
PROM1-206ENST00000505450 NBR1Q14596 966 aa11.06□□□□□ -0.64
PROM1-206ENST00000505450 FAM9BQ8IZU0 186 aa11.06□□□□□ -0.64
PROM1-206ENST00000505450 RTL5Q5HYW3 569 aaPredicted RBP11.05□□□□□ -0.64
PROM1-206ENST00000505450 TONSLQ96HA7 1378 aa11.04□□□□□ -0.64
PROM1-206ENST00000505450 ZNF777Q9ULD5 760 aaPredicted RBP11.03□□□□□ -0.64
PROM1-206ENST00000505450 SMARCA2P51531 1590 aa11.03□□□□□ -0.64
PROM1-206ENST00000505450 SENP3-EIF4A1A0A087X0R7 540 aa11.02□□□□□ -0.65
PROM1-206ENST00000505450 CCNB3Q8WWL7 1395 aa11.02□□□□□ -0.65
PROM1-206ENST00000505450 RAPGEF2Q9Y4G8 1499 aa11.02□□□□□ -0.65
PROM1-206ENST00000505450 TDRD9Q8NDG6 1382 aaKnown RBP10.99□□□□□ -0.65
PROM1-206ENST00000505450 EIF4G1Q04637 1599 aaKnown RBP10.99□□□□□ -0.65
PROM1-206ENST00000505450 CC2D2AQ9P2K1 1620 aa10.99□□□□□ -0.65
PROM1-206ENST00000505450 RAB3GAP2Q9H2M9 1393 aa10.98□□□□□ -0.65
PROM1-206ENST00000505450 TOP2AP11388 1531 aaKnown RBP10.98□□□□□ -0.65
PROM1-206ENST00000505450 B4GALNT3Q6L9W6 998 aa10.97□□□□□ -0.65
PROM1-206ENST00000505450 NPM2Q86SE8 214 aaKnown RBP10.96□□□□□ -0.65
PROM1-206ENST00000505450 ZNF326Q5BKZ1 582 aaKnown RBP10.96□□□□□ -0.66
PROM1-206ENST00000505450 CADPSQ9ULU8 1353 aa10.95□□□□□ -0.66
PROM1-206ENST00000505450 MRS2Q9HD23 443 aa10.95□□□□□ -0.66
PROM1-206ENST00000505450 CHIC2Q9UKJ5 165 aa10.95□□□□□ -0.66
PROM1-206ENST00000505450 SENP3Q9H4L4 574 aaPredicted RBP10.94□□□□□ -0.66
PROM1-206ENST00000505450 ANP32AP39687 249 aaKnown RBP10.93□□□□□ -0.66
PROM1-206ENST00000505450 CCER2I3L3R5 266 aa10.93□□□□□ -0.66
PROM1-206ENST00000505450 ATAD2BQ9ULI0 1458 aa10.92□□□□□ -0.66
PROM1-206ENST00000505450 MLECQ14165 292 aa10.91□□□□□ -0.66
PROM1-206ENST00000505450 PPP1R15AO75807 674 aaPredicted RBP10.9□□□□□ -0.66
PROM1-206ENST00000505450 DEKP35659 375 aaKnown RBP10.9□□□□□ -0.66
PROM1-206ENST00000505450 CCDC136Q96JN2 1154 aa10.9□□□□□ -0.66
PROM1-206ENST00000505450 NESP48681 1621 aa10.9□□□□□ -0.66
PROM1-206ENST00000505450 SETD5Q9C0A6 1442 aa10.9□□□□□ -0.67
PROM1-206ENST00000505450 PPP4R2Q9NY27 417 aa10.89□□□□□ -0.67
PROM1-206ENST00000505450 SALL2Q9Y467 1007 aaPredicted RBP10.89□□□□□ -0.67
PROM1-206ENST00000505450 RRP7BPQ9NSQ0 103 aa10.88□□□□□ -0.67
PROM1-206ENST00000505450 DAXXQ9UER7 740 aaPredicted RBP10.88□□□□□ -0.67
PROM1-206ENST00000505450 ZBTB47Q9UFB7 747 aaPredicted RBP10.87□□□□□ -0.67
PROM1-206ENST00000505450 KIF21BO75037 1637 aa10.87□□□□□ -0.67
PROM1-206ENST00000505450 SMARCA4P51532 1647 aa10.86□□□□□ -0.67
PROM1-206ENST00000505450 EIF4G2P78344 907 aaKnown RBP eCLIP10.86□□□□□ -0.67
PROM1-206ENST00000505450 KIF27Q86VH2 1401 aa10.85□□□□□ -0.67
PROM1-206ENST00000505450 MSH5O43196 834 aa10.85□□□□□ -0.67
PROM1-206ENST00000505450 RTN4Q9NQC3 1192 aaKnown RBP10.84□□□□□ -0.67
PROM1-206ENST00000505450 STAG3Q9UJ98 1225 aa10.84□□□□□ -0.67
PROM1-206ENST00000505450 NOP58Q9Y2X3 529 aaKnown RBP10.83□□□□□ -0.68
PROM1-206ENST00000505450 TIMELESSQ9UNS1 1208 aa10.82□□□□□ -0.68
PROM1-206ENST00000505450 MTUS2Q5JR59 1369 aa10.81□□□□□ -0.68
PROM1-206ENST00000505450 HSPA5P11021 654 aaKnown RBP10.81□□□□□ -0.68
PROM1-206ENST00000505450 FANCD2Q9BXW9 1451 aa10.8□□□□□ -0.68
PROM1-206ENST00000505450 FAM69CQ0P6D2 419 aa10.79□□□□□ -0.68
PROM1-206ENST00000505450 SYNJ1O43426 1573 aa10.79□□□□□ -0.68
PROM1-206ENST00000505450 CHGAP10645 457 aaKnown RBP10.78□□□□□ -0.68
PROM1-206ENST00000505450 FANCIQ9NVI1 1328 aa10.78□□□□□ -0.68
PROM1-206ENST00000505450 PLEKHD1A6NEE1 506 aa10.77□□□□□ -0.68
PROM1-206ENST00000505450 TMC1Q8TDI8 760 aa10.77□□□□□ -0.68
PROM1-206ENST00000505450 ARAP1Q96P48 1450 aa10.77□□□□□ -0.68
PROM1-206ENST00000505450 LAS1LQ9Y4W2 734 aaKnown RBP10.77□□□□□ -0.69
PROM1-206ENST00000505450 EIF5BO60841 1220 aaKnown RBP10.77□□□□□ -0.69
PROM1-206ENST00000505450 FOXD1Q16676 465 aa10.77□□□□□ -0.69
PROM1-206ENST00000505450 DNAJC5Q9H3Z4 198 aa10.75□□□□□ -0.69
PROM1-206ENST00000505450 NCAPD3P42695 1498 aa10.74□□□□□ -0.69
PROM1-206ENST00000505450 RRBP1Q9P2E9 1410 aaKnown RBP10.74□□□□□ -0.69
PROM1-206ENST00000505450 JPH4Q96JJ6 628 aa10.74□□□□□ -0.69
PROM1-206ENST00000505450 WDR97A6NE52 1622 aa10.74□□□□□ -0.69
PROM1-206ENST00000505450 CARMIL1Q5VZK9 1371 aa10.74□□□□□ -0.69
PROM1-206ENST00000505450 CUX2O14529 1486 aa10.73□□□□□ -0.69
PROM1-206ENST00000505450 BICRAQ9NZM4 1560 aa10.72□□□□□ -0.69
PROM1-206ENST00000505450 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.72□□□□□ -0.69
PROM1-206ENST00000505450 PHLDB1Q86UU1 1377 aa10.72□□□□□ -0.69
PROM1-206ENST00000505450 PLEKHG5O94827 1062 aa10.72□□□□□ -0.69
PROM1-206ENST00000505450 SLC4A1APQ9BWU0 796 aaKnown RBP10.72□□□□□ -0.69
PROM1-206ENST00000505450 CCDC184Q52MB2 194 aa10.71□□□□□ -0.69
PROM1-206ENST00000505450 AQRO60306 1485 aaKnown RBP eCLIP10.7□□□□□ -0.7
PROM1-206ENST00000505450 NEFMP07197 916 aa10.7□□□□□ -0.7
PROM1-206ENST00000505450 PAK3O75914 559 aaPredicted RBP10.7□□□□□ -0.7
PROM1-206ENST00000505450 ERICH6BQ5W0A0 696 aa10.7□□□□□ -0.7
PROM1-206ENST00000505450 KDM2AQ9Y2K7 1162 aa10.69□□□□□ -0.7
PROM1-206ENST00000505450 C14orf37Q86TY3 774 aa10.68□□□□□ -0.7
PROM1-206ENST00000505450 L3MBTL2Q969R5 705 aa10.68□□□□□ -0.7
PROM1-206ENST00000505450 FHAD1B1AJZ9 1412 aa10.68□□□□□ -0.7
PROM1-206ENST00000505450 ARHGAP35Q9NRY4 1499 aa10.68□□□□□ -0.7
PROM1-206ENST00000505450 PRKRIP1Q9H875 184 aaPredicted RBP10.67□□□□□ -0.7
PROM1-206ENST00000505450 IPO9Q96P70 1041 aaKnown RBP10.66□□□□□ -0.7
PROM1-206ENST00000505450 FHOD3Q2V2M9 1422 aa10.66□□□□□ -0.7
PROM1-206ENST00000505450 WASHC2AQ641Q2 1341 aa10.66□□□□□ -0.7
PROM1-206ENST00000505450 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.65□□□□□ -0.7
PROM1-206ENST00000505450 PRXQ9BXM0 1461 aa10.64□□□□□ -0.71
PROM1-206ENST00000505450 MPHOSPH9Q99550 1183 aa10.62□□□□□ -0.71
PROM1-206ENST00000505450 ANO8Q9HCE9 1232 aaPredicted RBP10.62□□□□□ -0.71
PROM1-206ENST00000505450 TSPY4P0CV99 314 aa10.61□□□□□ -0.71
PROM1-206ENST00000505450 TSPY10P0CW01 314 aa10.61□□□□□ -0.71
PROM1-206ENST00000505450 ARXQ96QS3 562 aa10.61□□□□□ -0.71
PROM1-206ENST00000505450 NUDCQ9Y266 331 aa10.61□□□□□ -0.71
PROM1-206ENST00000505450 ZBED9Q6R2W3 1325 aa10.61□□□□□ -0.71
PROM1-206ENST00000505450 LRRC9Q6ZRR7 1453 aa10.61□□□□□ -0.71
PROM1-206ENST00000505450 MRC2Q9UBG0 1479 aa10.61□□□□□ -0.71
PROM1-206ENST00000505450 IGF1RP08069 1367 aa10.6□□□□□ -0.71
PROM1-206ENST00000505450 RAD54L2Q9Y4B4 1467 aa10.6□□□□□ -0.71
PROM1-206ENST00000505450 CCDC18Q5T9S5 1454 aa10.6□□□□□ -0.71
PROM1-206ENST00000505450 MAPKBP1O60336 1514 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms