RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 RIMBP3BA6NNM3 1639 aa14.09□□□□□ -0.15
CDC42SE2-208ENST00000505065 RIMBP3Q9UFD9 1639 aa14.09□□□□□ -0.15
CDC42SE2-208ENST00000505065 KIAA0556O60303 1618 aa14.07□□□□□ -0.16
CDC42SE2-208ENST00000505065 DISP1Q96F81 1524 aa14.06□□□□□ -0.16
CDC42SE2-208ENST00000505065 GOLGA3Q08378 1498 aa14.05□□□□□ -0.16
CDC42SE2-208ENST00000505065 EFCAB5A4FU69 1503 aa14.04□□□□□ -0.16
CDC42SE2-208ENST00000505065 ERCC6L2Q5T890 1561 aa14.03□□□□□ -0.16
CDC42SE2-208ENST00000505065 CSRNP3Q8WYN3 585 aa14.02□□□□□ -0.17
CDC42SE2-208ENST00000505065 ARHGEF11O15085 1522 aa14.01□□□□□ -0.17
CDC42SE2-208ENST00000505065 LRRIQ1Q96JM4 1722 aa13.97□□□□□ -0.17
CDC42SE2-208ENST00000505065 ABCA8O94911 1581 aa13.95□□□□□ -0.18
CDC42SE2-208ENST00000505065 ARAP1Q96P48 1450 aa13.93□□□□□ -0.18
CDC42SE2-208ENST00000505065 OSCARQ8IYS5 282 aa13.93□□□□□ -0.18
CDC42SE2-208ENST00000505065 UHRF1BP1LA0JNW5 1464 aa13.93□□□□□ -0.18
CDC42SE2-208ENST00000505065 TNIKQ9UKE5 1360 aa13.93□□□□□ -0.18
CDC42SE2-208ENST00000505065 ADCY10Q96PN6 1610 aa13.91□□□□□ -0.18
CDC42SE2-208ENST00000505065 CHMP7Q8WUX9 453 aaPredicted RBP13.9□□□□□ -0.18
CDC42SE2-208ENST00000505065 ARHGAP35Q9NRY4 1499 aa13.89□□□□□ -0.19
CDC42SE2-208ENST00000505065 DNAJC5Q9H3Z4 198 aa13.87□□□□□ -0.19
CDC42SE2-208ENST00000505065 PRG4Q92954 1404 aaPredicted RBP13.86□□□□□ -0.19
CDC42SE2-208ENST00000505065 RAPGEF6Q8TEU7 1601 aa13.85□□□□□ -0.19
CDC42SE2-208ENST00000505065 ABCC2Q92887 1545 aa13.83□□□□□ -0.2
CDC42SE2-208ENST00000505065 CFAP43Q8NDM7 1665 aa13.82□□□□□ -0.2
CDC42SE2-208ENST00000505065 ZCCHC11Q5TAX3 1644 aaKnown RBP13.81□□□□□ -0.2
CDC42SE2-208ENST00000505065 MAPKBP1O60336 1514 aa13.81□□□□□ -0.2
CDC42SE2-208ENST00000505065 KDM5BQ9UGL1 1544 aa13.81□□□□□ -0.2
CDC42SE2-208ENST00000505065 JPH4Q96JJ6 628 aa13.78□□□□□ -0.2
CDC42SE2-208ENST00000505065 CARMIL2Q6F5E8 1435 aa13.78□□□□□ -0.2
CDC42SE2-208ENST00000505065 PCF11O94913 1555 aaKnown RBP13.77□□□□□ -0.2
CDC42SE2-208ENST00000505065 KIF13AQ9H1H9 1805 aa13.77□□□□□ -0.21
CDC42SE2-208ENST00000505065 HECW1Q76N89 1606 aa13.77□□□□□ -0.21
CDC42SE2-208ENST00000505065 MAP3K1Q13233 1512 aa13.75□□□□□ -0.21
CDC42SE2-208ENST00000505065 FYCO1Q9BQS8 1478 aa13.74□□□□□ -0.21
CDC42SE2-208ENST00000505065 CEP162Q5TB80 1403 aa13.73□□□□□ -0.21
CDC42SE2-208ENST00000505065 GLI2P10070 1586 aa13.73□□□□□ -0.21
CDC42SE2-208ENST00000505065 NUP153P49790 1475 aaKnown RBP13.72□□□□□ -0.21
CDC42SE2-208ENST00000505065 CASKIN1Q8WXD9 1431 aa13.71□□□□□ -0.22
CDC42SE2-208ENST00000505065 UACAQ9BZF9 1416 aa13.7□□□□□ -0.22
CDC42SE2-208ENST00000505065 MAP3K4Q9Y6R4 1608 aa13.7□□□□□ -0.22
CDC42SE2-208ENST00000505065 PPRC1Q5VV67 1664 aaKnown RBP13.7□□□□□ -0.22
CDC42SE2-208ENST00000505065 FBLN2P98095 1184 aa13.69□□□□□ -0.22
CDC42SE2-208ENST00000505065 FMN1Q68DA7 1419 aa13.69□□□□□ -0.22
CDC42SE2-208ENST00000505065 CLIP1P30622 1438 aa13.68□□□□□ -0.22
CDC42SE2-208ENST00000505065 PLB1Q6P1J6 1458 aa13.67□□□□□ -0.22
CDC42SE2-208ENST00000505065 FHOD3Q2V2M9 1422 aa13.67□□□□□ -0.22
CDC42SE2-208ENST00000505065 DIP2BQ9P265 1576 aa13.67□□□□□ -0.22
CDC42SE2-208ENST00000505065 ABCA9Q8IUA7 1624 aa13.66□□□□□ -0.22
CDC42SE2-208ENST00000505065 PTPRGP23470 1445 aa13.65□□□□□ -0.22
CDC42SE2-208ENST00000505065 CCDC18Q5T9S5 1454 aa13.65□□□□□ -0.22
CDC42SE2-208ENST00000505065 ATP10BO94823 1461 aa13.63□□□□□ -0.23
CDC42SE2-208ENST00000505065 EPRSP07814 1512 aaKnown RBP13.63□□□□□ -0.23
CDC42SE2-208ENST00000505065 MAGI3Q5TCQ9 1506 aa13.63□□□□□ -0.23
CDC42SE2-208ENST00000505065 TIAM1Q13009 1591 aa13.62□□□□□ -0.23
CDC42SE2-208ENST00000505065 VPS8Q8N3P4 1428 aa13.62□□□□□ -0.23
CDC42SE2-208ENST00000505065 FAM9AQ8IZU1 332 aaPredicted RBP13.61□□□□□ -0.23
CDC42SE2-208ENST00000505065 ARAP3Q8WWN8 1544 aa13.6□□□□□ -0.23
CDC42SE2-208ENST00000505065 CDC42BPAQ5VT25 1732 aa13.57□□□□□ -0.24
CDC42SE2-208ENST00000505065 ABCC10Q5T3U5 1492 aa13.56□□□□□ -0.24
CDC42SE2-208ENST00000505065 WDR7Q9Y4E6 1490 aa13.55□□□□□ -0.24
CDC42SE2-208ENST00000505065 PREX2Q70Z35 1606 aa13.55□□□□□ -0.24
CDC42SE2-208ENST00000505065 CDC42BPBQ9Y5S2 1711 aa13.55□□□□□ -0.24
CDC42SE2-208ENST00000505065 CDK13Q14004 1512 aaKnown RBP13.54□□□□□ -0.24
CDC42SE2-208ENST00000505065 EHBP1L1Q8N3D4 1523 aa13.54□□□□□ -0.24
CDC42SE2-208ENST00000505065 MYO5CQ9NQX4 1742 aa13.54□□□□□ -0.24
CDC42SE2-208ENST00000505065 KIF14Q15058 1648 aa13.54□□□□□ -0.24
CDC42SE2-208ENST00000505065 TTC37Q6PGP7 1564 aa13.53□□□□□ -0.24
CDC42SE2-208ENST00000505065 LOC105371045A0A1W2PR82 267 aa13.53□□□□□ -0.24
CDC42SE2-208ENST00000505065 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.52□□□□□ -0.25
CDC42SE2-208ENST00000505065 ITSN2Q9NZM3 1697 aa13.51□□□□□ -0.25
CDC42SE2-208ENST00000505065 CFAP74Q9C0B2 1584 aa13.51□□□□□ -0.25
CDC42SE2-208ENST00000505065 SUPT6HQ7KZ85 1726 aaKnown RBP13.51□□□□□ -0.25
CDC42SE2-208ENST00000505065 ASXL2Q76L83 1435 aa13.5□□□□□ -0.25
CDC42SE2-208ENST00000505065 UBTFP17480 764 aaKnown RBP13.5□□□□□ -0.25
CDC42SE2-208ENST00000505065 TROQ12816 1431 aaPredicted RBP13.46□□□□□ -0.25
CDC42SE2-208ENST00000505065 LRRC9Q6ZRR7 1453 aa13.46□□□□□ -0.25
CDC42SE2-208ENST00000505065 RICTORQ6R327 1708 aa13.44□□□□□ -0.26
CDC42SE2-208ENST00000505065 CROCC2H7BZ55 1655 aa13.44□□□□□ -0.26
CDC42SE2-208ENST00000505065 FRMPD1Q5SYB0 1578 aa13.43□□□□□ -0.26
CDC42SE2-208ENST00000505065 CYB5RLQ6IPT4 315 aa13.39□□□□□ -0.27
CDC42SE2-208ENST00000505065 SAMD9LQ8IVG5 1584 aa13.38□□□□□ -0.27
CDC42SE2-208ENST00000505065 ZMYM4Q5VZL5 1548 aa13.38□□□□□ -0.27
CDC42SE2-208ENST00000505065 TCOF1Q13428 1488 aaKnown RBP13.37□□□□□ -0.27
CDC42SE2-208ENST00000505065 BCORL1Q5H9F3 1711 aa13.37□□□□□ -0.27
CDC42SE2-208ENST00000505065 KDM5CP41229 1560 aa13.37□□□□□ -0.27
CDC42SE2-208ENST00000505065 ABCC1P33527 1531 aa13.37□□□□□ -0.27
CDC42SE2-208ENST00000505065 NEO1Q92859 1461 aa13.36□□□□□ -0.27
CDC42SE2-208ENST00000505065 ARHGEF5Q12774 1597 aa13.36□□□□□ -0.27
CDC42SE2-208ENST00000505065 MAST1Q9Y2H9 1570 aa13.36□□□□□ -0.27
CDC42SE2-208ENST00000505065 GPATCH8Q9UKJ3 1502 aaKnown RBP13.34□□□□□ -0.27
CDC42SE2-208ENST00000505065 P3H3Q8IVL6 736 aa13.34□□□□□ -0.27
CDC42SE2-208ENST00000505065 PLCH2O75038 1416 aa13.34□□□□□ -0.27
CDC42SE2-208ENST00000505065 NCOA2Q15596 1464 aa13.33□□□□□ -0.28
CDC42SE2-208ENST00000505065 TSPOAP1O95153 1857 aa13.33□□□□□ -0.28
CDC42SE2-208ENST00000505065 INO80Q9ULG1 1556 aaPredicted RBP13.32□□□□□ -0.28
CDC42SE2-208ENST00000505065 REREQ9P2R6 1566 aa13.32□□□□□ -0.28
CDC42SE2-208ENST00000505065 PHLDB1Q86UU1 1377 aa13.31□□□□□ -0.28
CDC42SE2-208ENST00000505065 TEX14Q8IWB6 1497 aa13.3□□□□□ -0.28
CDC42SE2-208ENST00000505065 DNMT1P26358 1616 aaKnown RBP13.3□□□□□ -0.28
CDC42SE2-208ENST00000505065 MIA2Q96PC5 1412 aa13.29□□□□□ -0.28
CDC42SE2-208ENST00000505065 ADGBQ8N7X0 1667 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms