RNA–Protein interactions for RNA: ENST00000505016.2

MATR3-234, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-234ENST00000505016 TOP2BQ02880 1626 aa21.82■■□□□ 1.08
MATR3-234ENST00000505016 BIVM-ERCC5R4GMW8 1640 aa21.82■■□□□ 1.08
MATR3-234ENST00000505016 TRHP20396 242 aaPredicted RBP21.73■■□□□ 1.07
MATR3-234ENST00000505016 GRIN2AQ12879 1464 aa21.72■■□□□ 1.07
MATR3-234ENST00000505016 ADAMTS12P58397 1594 aa21.72■■□□□ 1.07
MATR3-234ENST00000505016 CEP170Q5SW79 1584 aa21.65■■□□□ 1.06
MATR3-234ENST00000505016 FHAD1B1AJZ9 1412 aa21.65■■□□□ 1.06
MATR3-234ENST00000505016 NUP160Q12769 1436 aa21.65■■□□□ 1.06
MATR3-234ENST00000505016 ERICH3Q5RHP9 1530 aa21.65■■□□□ 1.06
MATR3-234ENST00000505016 ERCC6L2Q5T890 1561 aa21.63■■□□□ 1.05
MATR3-234ENST00000505016 SHROOM2Q13796 1616 aa21.55■■□□□ 1.04
MATR3-234ENST00000505016 CNKSR2Q8WXI2 1034 aa21.54■■□□□ 1.04
MATR3-234ENST00000505016 PRG4Q92954 1404 aaPredicted RBP21.44■■□□□ 1.02
MATR3-234ENST00000505016 RUSC2Q8N2Y8 1516 aa21.42■■□□□ 1.02
MATR3-234ENST00000505016 JPH4Q96JJ6 628 aa21.42■■□□□ 1.02
MATR3-234ENST00000505016 IGF1RP08069 1367 aa21.39■■□□□ 1.02
MATR3-234ENST00000505016 KIF27Q86VH2 1401 aa21.38■■□□□ 1.01
MATR3-234ENST00000505016 CUL7Q14999 1698 aa21.34■■□□□ 1.01
MATR3-234ENST00000505016 NCBP3Q53F19 620 aaKnown RBP21.32■■□□□ 1
MATR3-234ENST00000505016 KIAA0586Q9BVV6 1533 aa21.29■■□□□ 1
MATR3-234ENST00000505016 HOXD11P31277 338 aaPredicted RBP21.27■■□□□ 1
MATR3-234ENST00000505016 CARMIL1Q5VZK9 1371 aa21.24■□□□□ 0.99
MATR3-234ENST00000505016 KIF13AQ9H1H9 1805 aa21.22■□□□□ 0.99
MATR3-234ENST00000505016 RNF216Q9NWF9 866 aaPredicted RBP21.22■□□□□ 0.99
MATR3-234ENST00000505016 KCNA4P22459 653 aa21.21■□□□□ 0.99
MATR3-234ENST00000505016 ADCY10Q96PN6 1610 aa21.2■□□□□ 0.98
MATR3-234ENST00000505016 NPM1P06748 294 aaKnown RBP eCLIP21.16■□□□□ 0.98
MATR3-234ENST00000505016 MAPKBP1O60336 1514 aa21.15■□□□□ 0.98
MATR3-234ENST00000505016 NPM3O75607 178 aaKnown RBP21.14■□□□□ 0.97
MATR3-234ENST00000505016 ABCC10Q5T3U5 1492 aa21.13■□□□□ 0.97
MATR3-234ENST00000505016 FAM69CQ0P6D2 419 aa21.11■□□□□ 0.97
MATR3-234ENST00000505016 IQGAP2Q13576 1575 aa21.1■□□□□ 0.97
MATR3-234ENST00000505016 PTPRGP23470 1445 aa21.1■□□□□ 0.97
MATR3-234ENST00000505016 DIP2BQ9P265 1576 aa21.09■□□□□ 0.97
MATR3-234ENST00000505016 TTBK1Q5TCY1 1321 aaPredicted RBP21.07■□□□□ 0.96
MATR3-234ENST00000505016 CARMIL2Q6F5E8 1435 aa21.07■□□□□ 0.96
MATR3-234ENST00000505016 TNIKQ9UKE5 1360 aa21.06■□□□□ 0.96
MATR3-234ENST00000505016 RAPGEF2Q9Y4G8 1499 aa21.05■□□□□ 0.96
MATR3-234ENST00000505016 DISP1Q96F81 1524 aa21.02■□□□□ 0.96
MATR3-234ENST00000505016 ABCC2Q92887 1545 aa20.99■□□□□ 0.95
MATR3-234ENST00000505016 UGGT2Q9NYU1 1516 aa20.97■□□□□ 0.95
MATR3-234ENST00000505016 UHRF1BP1LA0JNW5 1464 aa20.95■□□□□ 0.94
MATR3-234ENST00000505016 UACAQ9BZF9 1416 aa20.94■□□□□ 0.94
MATR3-234ENST00000505016 TSPOAP1O95153 1857 aa20.93■□□□□ 0.94
MATR3-234ENST00000505016 ASXL2Q76L83 1435 aa20.92■□□□□ 0.94
MATR3-234ENST00000505016 KIAA0556O60303 1618 aa20.92■□□□□ 0.94
MATR3-234ENST00000505016 KDM6BO15054 1643 aa20.89■□□□□ 0.93
MATR3-234ENST00000505016 PLB1Q6P1J6 1458 aa20.88■□□□□ 0.93
MATR3-234ENST00000505016 DCAF8L1A6NGE4 600 aa20.88■□□□□ 0.93
MATR3-234ENST00000505016 CTTNBP2Q8WZ74 1663 aa20.88■□□□□ 0.93
MATR3-234ENST00000505016 KDM5BQ9UGL1 1544 aa20.86■□□□□ 0.93
MATR3-234ENST00000505016 PRXQ9BXM0 1461 aa20.85■□□□□ 0.93
MATR3-234ENST00000505016 GLI2P10070 1586 aa20.85■□□□□ 0.93
MATR3-234ENST00000505016 ZCCHC11Q5TAX3 1644 aaKnown RBP20.82■□□□□ 0.92
MATR3-234ENST00000505016 PPRC1Q5VV67 1664 aaKnown RBP20.82■□□□□ 0.92
MATR3-234ENST00000505016 EPRSP07814 1512 aaKnown RBP20.79■□□□□ 0.92
MATR3-234ENST00000505016 GOLGA3Q08378 1498 aa20.78■□□□□ 0.92
MATR3-234ENST00000505016 MAP3K4Q9Y6R4 1608 aa20.75■□□□□ 0.91
MATR3-234ENST00000505016 ABCA8O94911 1581 aa20.73■□□□□ 0.91
MATR3-234ENST00000505016 WDR7Q9Y4E6 1490 aa20.71■□□□□ 0.91
MATR3-234ENST00000505016 KDM4FA0A1W2PPD8 638 aa20.69■□□□□ 0.9
MATR3-234ENST00000505016 COL17A1Q9UMD9 1497 aaPredicted RBP20.69■□□□□ 0.9
MATR3-234ENST00000505016 CSRNP3Q8WYN3 585 aa20.68■□□□□ 0.9
MATR3-234ENST00000505016 TEX14Q8IWB6 1497 aa20.65■□□□□ 0.9
MATR3-234ENST00000505016 P3H3Q8IVL6 736 aa20.65■□□□□ 0.9
MATR3-234ENST00000505016 KCNH8Q96L42 1107 aa20.61■□□□□ 0.89
MATR3-234ENST00000505016 SAMD9Q5K651 1589 aa20.59■□□□□ 0.89
MATR3-234ENST00000505016 CD109Q6YHK3 1445 aa20.59■□□□□ 0.89
MATR3-234ENST00000505016 ARID3CA6NKF2 412 aa20.58■□□□□ 0.89
MATR3-234ENST00000505016 CFAP43Q8NDM7 1665 aa20.58■□□□□ 0.88
MATR3-234ENST00000505016 EEA1Q15075 1411 aa20.57■□□□□ 0.88
MATR3-234ENST00000505016 ATP10BO94823 1461 aa20.56■□□□□ 0.88
MATR3-234ENST00000505016 MAGI3Q5TCQ9 1506 aa20.56■□□□□ 0.88
MATR3-234ENST00000505016 FAM9AQ8IZU1 332 aaPredicted RBP20.54■□□□□ 0.88
MATR3-234ENST00000505016 ADGRL1O94910 1474 aa20.52■□□□□ 0.88
MATR3-234ENST00000505016 RAPGEF6Q8TEU7 1601 aa20.5■□□□□ 0.87
MATR3-234ENST00000505016 RANGAP1P46060 587 aaPredicted RBP20.5■□□□□ 0.87
MATR3-234ENST00000505016 FHOD3Q2V2M9 1422 aa20.46■□□□□ 0.87
MATR3-234ENST00000505016 NUP153P49790 1475 aaKnown RBP20.44■□□□□ 0.86
MATR3-234ENST00000505016 KIF21BO75037 1637 aa20.44■□□□□ 0.86
MATR3-234ENST00000505016 ABCA9Q8IUA7 1624 aa20.44■□□□□ 0.86
MATR3-234ENST00000505016 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.41■□□□□ 0.86
MATR3-234ENST00000505016 HNRNPUL2Q1KMD3 747 aaKnown RBP20.41■□□□□ 0.86
MATR3-234ENST00000505016 ARAP3Q8WWN8 1544 aa20.41■□□□□ 0.86
MATR3-234ENST00000505016 EFCAB5A4FU69 1503 aa20.37■□□□□ 0.85
MATR3-234ENST00000505016 EHMT2Q96KQ7 1210 aa20.33■□□□□ 0.85
MATR3-234ENST00000505016 PHLDB1Q86UU1 1377 aa20.33■□□□□ 0.84
MATR3-234ENST00000505016 NEO1Q92859 1461 aa20.32■□□□□ 0.84
MATR3-234ENST00000505016 RAPGEF3O95398 923 aa20.31■□□□□ 0.84
MATR3-234ENST00000505016 PLEKHD1A6NEE1 506 aa20.3■□□□□ 0.84
MATR3-234ENST00000505016 UBTFP17480 764 aaKnown RBP20.28■□□□□ 0.84
MATR3-234ENST00000505016 RNF39Q9H2S5 420 aa20.28■□□□□ 0.84
MATR3-234ENST00000505016 FRMPD1Q5SYB0 1578 aa20.26■□□□□ 0.83
MATR3-234ENST00000505016 CDK13Q14004 1512 aaKnown RBP20.25■□□□□ 0.83
MATR3-234ENST00000505016 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.25■□□□□ 0.832e-7■□□□□ 10.6
MATR3-234ENST00000505016 HECW2Q9P2P5 1572 aa20.24■□□□□ 0.83
MATR3-234ENST00000505016 TTC37Q6PGP7 1564 aa20.22■□□□□ 0.83
MATR3-234ENST00000505016 ARHGAP35Q9NRY4 1499 aa20.22■□□□□ 0.83
MATR3-234ENST00000505016 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.21■□□□□ 0.838e-8■■□□□ 13.5
MATR3-234ENST00000505016 AKNAQ7Z591 1439 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms