RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 RANGAP1P46060 587 aaPredicted RBP14.87□□□□□ -0.03
COL1A1-210ENST00000504289 GRIN2BQ13224 1484 aa14.87□□□□□ -0.03
COL1A1-210ENST00000504289 ERCC6Q03468 1493 aa14.86□□□□□ -0.03
COL1A1-210ENST00000504289 FMN1Q68DA7 1419 aa14.84□□□□□ -0.03
COL1A1-210ENST00000504289 PBRM1Q86U86 1689 aa14.84□□□□□ -0.03
COL1A1-210ENST00000504289 FYCO1Q9BQS8 1478 aa14.83□□□□□ -0.03
COL1A1-210ENST00000504289 TIAM1Q13009 1591 aa14.83□□□□□ -0.04
COL1A1-210ENST00000504289 CASKIN1Q8WXD9 1431 aa14.83□□□□□ -0.04
COL1A1-210ENST00000504289 RRBP1Q9P2E9 1410 aaKnown RBP14.83□□□□□ -0.04
COL1A1-210ENST00000504289 ADAMTS12P58397 1594 aa14.81□□□□□ -0.04
COL1A1-210ENST00000504289 SAMD9Q5K651 1589 aa14.81□□□□□ -0.04
COL1A1-210ENST00000504289 CCER1Q8TC90 406 aaPredicted RBP14.8□□□□□ -0.04
COL1A1-210ENST00000504289 THOC2Q8NI27 1593 aaKnown RBP14.78□□□□□ -0.04
COL1A1-210ENST00000504289 CFAP43Q8NDM7 1665 aa14.77□□□□□ -0.04
COL1A1-210ENST00000504289 TTBK1Q5TCY1 1321 aaPredicted RBP14.77□□□□□ -0.04
COL1A1-210ENST00000504289 KANK4Q5T7N3 995 aaPredicted RBP14.77□□□□□ -0.05
COL1A1-210ENST00000504289 LRRC9Q6ZRR7 1453 aa14.76□□□□□ -0.05
COL1A1-210ENST00000504289 PCF11O94913 1555 aaKnown RBP14.74□□□□□ -0.05
COL1A1-210ENST00000504289 MAGI1Q96QZ7 1491 aaPredicted RBP14.74□□□□□ -0.05
COL1A1-210ENST00000504289 FHOD3Q2V2M9 1422 aa14.74□□□□□ -0.05
COL1A1-210ENST00000504289 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.73□□□□□ -0.05
COL1A1-210ENST00000504289 IQGAP2Q13576 1575 aa14.73□□□□□ -0.05
COL1A1-210ENST00000504289 CCNB3Q8WWL7 1395 aa14.73□□□□□ -0.05
COL1A1-210ENST00000504289 CLSPNQ9HAW4 1339 aa14.71□□□□□ -0.05
COL1A1-210ENST00000504289 SNAPC4Q5SXM2 1469 aa14.71□□□□□ -0.05
COL1A1-210ENST00000504289 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.71□□□□□ -0.06
COL1A1-210ENST00000504289 KIAA0586Q9BVV6 1533 aa14.71□□□□□ -0.06
COL1A1-210ENST00000504289 UGGT2Q9NYU1 1516 aa14.71□□□□□ -0.06
COL1A1-210ENST00000504289 ZNF608Q9ULD9 1512 aaPredicted RBP14.71□□□□□ -0.06
COL1A1-210ENST00000504289 EIF4G3O43432 1585 aaKnown RBP14.69□□□□□ -0.06
COL1A1-210ENST00000504289 HNRNPUL2Q1KMD3 747 aaKnown RBP14.67□□□□□ -0.06
COL1A1-210ENST00000504289 GRIN2AQ12879 1464 aa14.66□□□□□ -0.06
COL1A1-210ENST00000504289 CCDC18Q5T9S5 1454 aa14.66□□□□□ -0.06
COL1A1-210ENST00000504289 SYNJ2O15056 1496 aa14.65□□□□□ -0.06
COL1A1-210ENST00000504289 P3H3Q8IVL6 736 aa14.65□□□□□ -0.06
COL1A1-210ENST00000504289 HECW1Q76N89 1606 aa14.6□□□□□ -0.07
COL1A1-210ENST00000504289 PHLDB1Q86UU1 1377 aa14.6□□□□□ -0.07
COL1A1-210ENST00000504289 EHBP1L1Q8N3D4 1523 aa14.59□□□□□ -0.07
COL1A1-210ENST00000504289 MTUS2Q5JR59 1369 aa14.59□□□□□ -0.07
COL1A1-210ENST00000504289 NUP160Q12769 1436 aa14.58□□□□□ -0.08
COL1A1-210ENST00000504289 CHMP7Q8WUX9 453 aaPredicted RBP14.56□□□□□ -0.08
COL1A1-210ENST00000504289 KIAA0556O60303 1618 aa14.55□□□□□ -0.08
COL1A1-210ENST00000504289 ATP1B4Q9UN42 357 aaPredicted RBP14.55□□□□□ -0.08
COL1A1-210ENST00000504289 DISP1Q96F81 1524 aa14.55□□□□□ -0.08
COL1A1-210ENST00000504289 SUPT6HQ7KZ85 1726 aaKnown RBP14.54□□□□□ -0.08
COL1A1-210ENST00000504289 ARHGEF11O15085 1522 aa14.53□□□□□ -0.08
COL1A1-210ENST00000504289 FGD6Q6ZV73 1430 aa14.53□□□□□ -0.08
COL1A1-210ENST00000504289 EPRSP07814 1512 aaKnown RBP14.52□□□□□ -0.08
COL1A1-210ENST00000504289 CARMIL2Q6F5E8 1435 aa14.52□□□□□ -0.08
COL1A1-210ENST00000504289 DHX57Q6P158 1386 aaKnown RBP14.52□□□□□ -0.08
COL1A1-210ENST00000504289 MYOM3Q5VTT5 1437 aa14.51□□□□□ -0.09
COL1A1-210ENST00000504289 LRRIQ1Q96JM4 1722 aa14.51□□□□□ -0.09
COL1A1-210ENST00000504289 CEP170Q5SW79 1584 aa14.51□□□□□ -0.09
COL1A1-210ENST00000504289 NCOA2Q15596 1464 aa14.5□□□□□ -0.09
COL1A1-210ENST00000504289 SETD5Q9C0A6 1442 aa14.5□□□□□ -0.09
COL1A1-210ENST00000504289 MIA2Q96PC5 1412 aa14.48□□□□□ -0.09
COL1A1-210ENST00000504289 ACIN1Q9UKV3 1341 aaKnown RBP14.47□□□□□ -0.09
COL1A1-210ENST00000504289 CDK11AQ9UQ88 783 aaPredicted RBP14.47□□□□□ -0.09
COL1A1-210ENST00000504289 TCOF1Q13428 1488 aaKnown RBP14.45□□□□□ -0.1
COL1A1-210ENST00000504289 RAPGEF6Q8TEU7 1601 aa14.45□□□□□ -0.1
COL1A1-210ENST00000504289 FAM50AQ14320 339 aaKnown RBP14.45□□□□□ -0.1
COL1A1-210ENST00000504289 RAB3GAP2Q9H2M9 1393 aa14.45□□□□□ -0.1
COL1A1-210ENST00000504289 JPH4Q96JJ6 628 aa14.44□□□□□ -0.1
COL1A1-210ENST00000504289 NUP153P49790 1475 aaKnown RBP14.42□□□□□ -0.1
COL1A1-210ENST00000504289 MAGI3Q5TCQ9 1506 aa14.41□□□□□ -0.1
COL1A1-210ENST00000504289 AKNAQ7Z591 1439 aa14.41□□□□□ -0.1
COL1A1-210ENST00000504289 TIMELESSQ9UNS1 1208 aa14.4□□□□□ -0.1
COL1A1-210ENST00000504289 HFM1A2PYH4 1435 aa14.4□□□□□ -0.1
COL1A1-210ENST00000504289 PTPN23Q9H3S7 1636 aa14.39□□□□□ -0.11
COL1A1-210ENST00000504289 ZNF316A6NFI3 1004 aaPredicted RBP14.38□□□□□ -0.11
COL1A1-210ENST00000504289 ITGAEP38570 1179 aa14.38□□□□□ -0.11
COL1A1-210ENST00000504289 FBLN2P98095 1184 aa14.38□□□□□ -0.11
COL1A1-210ENST00000504289 CDK13Q14004 1512 aaKnown RBP14.37□□□□□ -0.11
COL1A1-210ENST00000504289 TROQ12816 1431 aaPredicted RBP14.36□□□□□ -0.11
COL1A1-210ENST00000504289 ABCA8O94911 1581 aa14.35□□□□□ -0.11
COL1A1-210ENST00000504289 ADCY10Q96PN6 1610 aa14.33□□□□□ -0.11
COL1A1-210ENST00000504289 SHROOM2Q13796 1616 aa14.33□□□□□ -0.12
COL1A1-210ENST00000504289 MAPKBP1O60336 1514 aa14.31□□□□□ -0.12
COL1A1-210ENST00000504289 ROCK1Q13464 1354 aa14.31□□□□□ -0.12
COL1A1-210ENST00000504289 NAIPQ13075 1403 aa14.31□□□□□ -0.12
COL1A1-210ENST00000504289 UACAQ9BZF9 1416 aa14.31□□□□□ -0.12
COL1A1-210ENST00000504289 PLB1Q6P1J6 1458 aa14.31□□□□□ -0.12
COL1A1-210ENST00000504289 PTPRKQ15262 1439 aa14.3□□□□□ -0.12
COL1A1-210ENST00000504289 PRG4Q92954 1404 aaPredicted RBP14.3□□□□□ -0.12
COL1A1-210ENST00000504289 CHD1O14646 1710 aa14.29□□□□□ -0.12
COL1A1-210ENST00000504289 PTPRGP23470 1445 aa14.29□□□□□ -0.12
COL1A1-210ENST00000504289 ITSN2Q9NZM3 1697 aa14.29□□□□□ -0.12
COL1A1-210ENST00000504289 DIEXFQ68CQ4 756 aaKnown RBP14.28□□□□□ -0.12
COL1A1-210ENST00000504289 GCC2Q8IWJ2 1684 aa14.27□□□□□ -0.12
COL1A1-210ENST00000504289 PLEKHD1A6NEE1 506 aa14.26□□□□□ -0.13
COL1A1-210ENST00000504289 DNMT1P26358 1616 aaKnown RBP14.25□□□□□ -0.13
COL1A1-210ENST00000504289 ATP10BO94823 1461 aa14.25□□□□□ -0.13
COL1A1-210ENST00000504289 OSCARQ8IYS5 282 aa14.24□□□□□ -0.13
COL1A1-210ENST00000504289 GPATCH8Q9UKJ3 1502 aaKnown RBP14.23□□□□□ -0.13
COL1A1-210ENST00000504289 DAPK1P53355 1430 aa14.23□□□□□ -0.13
COL1A1-210ENST00000504289 KIF14Q15058 1648 aa14.22□□□□□ -0.13
COL1A1-210ENST00000504289 CLASP1Q7Z460 1538 aa14.21□□□□□ -0.13
COL1A1-210ENST00000504289 ABCC10Q5T3U5 1492 aa14.2□□□□□ -0.14
COL1A1-210ENST00000504289 CFDP1Q9UEE9 299 aaPredicted RBP14.2□□□□□ -0.14
COL1A1-210ENST00000504289 ABCC5O15440 1437 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms