RNA–Protein interactions for RNA: ENST00000504224.5

RNF4-205, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-205ENST00000504224 IGF1RP08069 1367 aa37.54■■■■□ 3.6
RNF4-205ENST00000504224 CUL7Q14999 1698 aa37.43■■■■□ 3.58
RNF4-205ENST00000504224 KIAA0586Q9BVV6 1533 aa37.41■■■■□ 3.58
RNF4-205ENST00000504224 NPM1P06748 294 aaKnown RBP eCLIP37.39■■■■□ 3.58
RNF4-205ENST00000504224 AEBP2Q6ZN18 517 aaPredicted RBP37.35■■■■□ 3.57
RNF4-205ENST00000504224 CARMIL1Q5VZK9 1371 aa37.32■■■■□ 3.57
RNF4-205ENST00000504224 KIF13AQ9H1H9 1805 aa37.27■■■■□ 3.56
RNF4-205ENST00000504224 FAM69CQ0P6D2 419 aa37.25■■■■□ 3.55
RNF4-205ENST00000504224 ADCY10Q96PN6 1610 aa37.23■■■■□ 3.55
RNF4-205ENST00000504224 TTBK1Q5TCY1 1321 aaPredicted RBP37.2■■■■□ 3.55
RNF4-205ENST00000504224 ABCC10Q5T3U5 1492 aa37.19■■■■□ 3.54
RNF4-205ENST00000504224 MAPKBP1O60336 1514 aa37.17■■■■□ 3.54
RNF4-205ENST00000504224 PTPRGP23470 1445 aa37.14■■■■□ 3.54
RNF4-205ENST00000504224 CARMIL2Q6F5E8 1435 aa37.1■■■■□ 3.53
RNF4-205ENST00000504224 DIP2BQ9P265 1576 aa37.07■■■■□ 3.52
RNF4-205ENST00000504224 TNIKQ9UKE5 1360 aa37.04■■■■□ 3.52
RNF4-205ENST00000504224 IQGAP2Q13576 1575 aa37.04■■■■□ 3.52
RNF4-205ENST00000504224 RAPGEF2Q9Y4G8 1499 aa36.95■■■■□ 3.51
RNF4-205ENST00000504224 ABCC2Q92887 1545 aa36.9■■■■□ 3.5
RNF4-205ENST00000504224 DISP1Q96F81 1524 aa36.86■■■■□ 3.49
RNF4-205ENST00000504224 TSPOAP1O95153 1857 aa36.84■■■■□ 3.49
RNF4-205ENST00000504224 UACAQ9BZF9 1416 aa36.83■■■■□ 3.49
RNF4-205ENST00000504224 ASXL2Q76L83 1435 aa36.81■■■■□ 3.48
RNF4-205ENST00000504224 KDM6BO15054 1643 aa36.8■■■■□ 3.48
RNF4-205ENST00000504224 UHRF1BP1LA0JNW5 1464 aa36.8■■■■□ 3.48
RNF4-205ENST00000504224 UGGT2Q9NYU1 1516 aa36.8■■■■□ 3.48
RNF4-205ENST00000504224 PLB1Q6P1J6 1458 aa36.77■■■■□ 3.48
RNF4-205ENST00000504224 KIAA0556O60303 1618 aa36.7■■■■□ 3.47
RNF4-205ENST00000504224 GLI2P10070 1586 aa36.63■■■■□ 3.45
RNF4-205ENST00000504224 KDM5BQ9UGL1 1544 aa36.63■■■■□ 3.45
RNF4-205ENST00000504224 CTTNBP2Q8WZ74 1663 aa36.59■■■■□ 3.45
RNF4-205ENST00000504224 ZCCHC11Q5TAX3 1644 aaKnown RBP36.56■■■■□ 3.44
RNF4-205ENST00000504224 EPRSP07814 1512 aaKnown RBP36.55■■■■□ 3.44
RNF4-205ENST00000504224 GOLGA3Q08378 1498 aa36.54■■■■□ 3.44
RNF4-205ENST00000504224 PPRC1Q5VV67 1664 aaKnown RBP36.52■■■■□ 3.44
RNF4-205ENST00000504224 PRXQ9BXM0 1461 aa36.52■■■■□ 3.44
RNF4-205ENST00000504224 KDM4FA0A1W2PPD8 638 aa36.48■■■■□ 3.43
RNF4-205ENST00000504224 MAP3K4Q9Y6R4 1608 aa36.43■■■■□ 3.42
RNF4-205ENST00000504224 WDR7Q9Y4E6 1490 aa36.43■■■■□ 3.42
RNF4-205ENST00000504224 TEX14Q8IWB6 1497 aa36.4■■■■□ 3.42
RNF4-205ENST00000504224 ABCA8O94911 1581 aa36.36■■■■□ 3.41
RNF4-205ENST00000504224 KCNH8Q96L42 1107 aa36.34■■■■□ 3.41
RNF4-205ENST00000504224 COL17A1Q9UMD9 1497 aaPredicted RBP36.34■■■■□ 3.41
RNF4-205ENST00000504224 P3H3Q8IVL6 736 aa36.33■■■■□ 3.41
RNF4-205ENST00000504224 FAM9AQ8IZU1 332 aaPredicted RBP36.32■■■■□ 3.4
RNF4-205ENST00000504224 CSRNP3Q8WYN3 585 aa36.31■■■■□ 3.4
RNF4-205ENST00000504224 ARID3CA6NKF2 412 aa36.26■■■■□ 3.4
RNF4-205ENST00000504224 CD109Q6YHK3 1445 aa36.24■■■■□ 3.39
RNF4-205ENST00000504224 ADGRL1O94910 1474 aa36.18■■■■□ 3.38
RNF4-205ENST00000504224 MAGI3Q5TCQ9 1506 aa36.15■■■■□ 3.38
RNF4-205ENST00000504224 CFAP43Q8NDM7 1665 aa36.15■■■■□ 3.38
RNF4-205ENST00000504224 RANGAP1P46060 587 aaPredicted RBP36.11■■■■□ 3.37
RNF4-205ENST00000504224 ATP10BO94823 1461 aa36.1■■■■□ 3.37
RNF4-205ENST00000504224 EEA1Q15075 1411 aa36.08■■■■□ 3.37
RNF4-205ENST00000504224 SAMD9Q5K651 1589 aa36.06■■■■□ 3.36
RNF4-205ENST00000504224 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.02■■■■□ 3.36
RNF4-205ENST00000504224 HNRNPUL2Q1KMD3 747 aaKnown RBP36.02■■■■□ 3.36
RNF4-205ENST00000504224 RAPGEF6Q8TEU7 1601 aa35.97■■■■□ 3.35
RNF4-205ENST00000504224 FHOD3Q2V2M9 1422 aa35.92■■■■□ 3.34
RNF4-205ENST00000504224 ABCA9Q8IUA7 1624 aa35.86■■■■□ 3.33
RNF4-205ENST00000504224 ARAP3Q8WWN8 1544 aa35.86■■■■□ 3.33
RNF4-205ENST00000504224 NUP153P49790 1475 aaKnown RBP35.86■■■■□ 3.33
RNF4-205ENST00000504224 PHLDB1Q86UU1 1377 aa35.8■■■■□ 3.32
RNF4-205ENST00000504224 KIF21BO75037 1637 aa35.78■■■■□ 3.32
RNF4-205ENST00000504224 EHMT2Q96KQ7 1210 aa35.77■■■■□ 3.32
RNF4-205ENST00000504224 PLEKHD1A6NEE1 506 aa35.76■■■■□ 3.32
RNF4-205ENST00000504224 RAPGEF3O95398 923 aa35.75■■■■□ 3.31
RNF4-205ENST00000504224 NEO1Q92859 1461 aa35.73■■■■□ 3.31
RNF4-205ENST00000504224 EFCAB5A4FU69 1503 aa35.73■■■■□ 3.31
RNF4-205ENST00000504224 UBTFP17480 764 aaKnown RBP35.68■■■■□ 3.3
RNF4-205ENST00000504224 HECW2Q9P2P5 1572 aa35.67■■■■□ 3.3
RNF4-205ENST00000504224 CHIC1Q5VXU3 224 aa35.58■■■■□ 3.29
RNF4-205ENST00000504224 ATP1B4Q9UN42 357 aaPredicted RBP35.57■■■■□ 3.28
RNF4-205ENST00000504224 FRMPD1Q5SYB0 1578 aa35.55■■■■□ 3.28
RNF4-205ENST00000504224 ARID4BQ4LE39 1312 aaPredicted RBP35.55■■■■□ 3.28
RNF4-205ENST00000504224 CDK13Q14004 1512 aaKnown RBP35.54■■■■□ 3.28
RNF4-205ENST00000504224 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.53■■■■□ 3.28
RNF4-205ENST00000504224 AKNAQ7Z591 1439 aa35.52■■■■□ 3.28
RNF4-205ENST00000504224 FANCAO15360 1455 aa35.52■■■■□ 3.28
RNF4-205ENST00000504224 DENND4BO75064 1496 aaPredicted RBP35.52■■■■□ 3.28
RNF4-205ENST00000504224 TTC37Q6PGP7 1564 aa35.48■■■■□ 3.27
RNF4-205ENST00000504224 CFAP74Q9C0B2 1584 aa35.47■■■■□ 3.27
RNF4-205ENST00000504224 FMN1Q68DA7 1419 aa35.46■■■■□ 3.27
RNF4-205ENST00000504224 ILDR1Q86SU0 546 aaPredicted RBP35.45■■■■□ 3.27
RNF4-205ENST00000504224 ADAMTSL3P82987 1691 aa35.44■■■■□ 3.26
RNF4-205ENST00000504224 PTPRMP28827 1452 aa35.43■■■■□ 3.26
RNF4-205ENST00000504224 ARHGAP35Q9NRY4 1499 aa35.42■■■■□ 3.26
RNF4-205ENST00000504224 RICTORQ6R327 1708 aa35.4■■■■□ 3.26
RNF4-205ENST00000504224 HECW1Q76N89 1606 aa35.39■■■■□ 3.26
RNF4-205ENST00000504224 ARHGEF40Q8TER5 1519 aa35.39■■■■□ 3.26
RNF4-205ENST00000504224 BCORL1Q5H9F3 1711 aa35.37■■■■□ 3.25
RNF4-205ENST00000504224 CDK11AQ9UQ88 783 aaPredicted RBP35.36■■■■□ 3.25
RNF4-205ENST00000504224 PLCH2O75038 1416 aa35.33■■■■□ 3.25
RNF4-205ENST00000504224 MADDQ8WXG6 1647 aa35.32■■■■□ 3.25
RNF4-205ENST00000504224 SCAPERQ9BY12 1400 aa35.29■■■■□ 3.24
RNF4-205ENST00000504224 ZMYM4Q5VZL5 1548 aa35.28■■■■□ 3.24
RNF4-205ENST00000504224 ZFYVE16Q7Z3T8 1539 aa35.28■■■■□ 3.24
RNF4-205ENST00000504224 YEATS2Q9ULM3 1422 aa35.27■■■■□ 3.24
RNF4-205ENST00000504224 EFCAB2Q5VUJ9 269 aa35.25■■■■□ 3.23
RNF4-205ENST00000504224 POGZQ7Z3K3 1410 aa35.23■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms