RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 RUSC2Q8N2Y8 1516 aa28.13■■■□□ 2.09
SCLT1-204ENST00000503215 CARMIL1Q5VZK9 1371 aa28.09■■■□□ 2.09
SCLT1-204ENST00000503215 CUL7Q14999 1698 aa28.07■■■□□ 2.08
SCLT1-204ENST00000503215 KIAA0586Q9BVV6 1533 aa28.05■■■□□ 2.08
SCLT1-204ENST00000503215 TTBK1Q5TCY1 1321 aaPredicted RBP27.84■■■□□ 2.05
SCLT1-204ENST00000503215 ADCY10Q96PN6 1610 aa27.81■■■□□ 2.04
SCLT1-204ENST00000503215 RAPGEF2Q9Y4G8 1499 aa27.81■■■□□ 2.04
SCLT1-204ENST00000503215 PTPRGP23470 1445 aa27.79■■■□□ 2.04
SCLT1-204ENST00000503215 NPM1P06748 294 aaKnown RBP eCLIP27.78■■■□□ 2.04
SCLT1-204ENST00000503215 IQGAP2Q13576 1575 aa27.77■■■□□ 2.04
SCLT1-204ENST00000503215 TNIKQ9UKE5 1360 aa27.73■■■□□ 2.03
SCLT1-204ENST00000503215 CARMIL2Q6F5E8 1435 aa27.73■■■□□ 2.03
SCLT1-204ENST00000503215 KIF13AQ9H1H9 1805 aa27.73■■■□□ 2.03
SCLT1-204ENST00000503215 FAM69CQ0P6D2 419 aa27.71■■■□□ 2.03
SCLT1-204ENST00000503215 DISP1Q96F81 1524 aa27.7■■■□□ 2.02
SCLT1-204ENST00000503215 ABCC10Q5T3U5 1492 aa27.68■■■□□ 2.02
SCLT1-204ENST00000503215 MAPKBP1O60336 1514 aa27.68■■■□□ 2.02
SCLT1-204ENST00000503215 UGGT2Q9NYU1 1516 aa27.63■■■□□ 2.01
SCLT1-204ENST00000503215 PRXQ9BXM0 1461 aa27.61■■■□□ 2.01
SCLT1-204ENST00000503215 DIP2BQ9P265 1576 aa27.59■■■□□ 2.01
SCLT1-204ENST00000503215 ABCC2Q92887 1545 aa27.57■■■□□ 2
SCLT1-204ENST00000503215 UACAQ9BZF9 1416 aa27.56■■■□□ 2
SCLT1-204ENST00000503215 KIAA0556O60303 1618 aa27.53■■■□□ 2
SCLT1-204ENST00000503215 UHRF1BP1LA0JNW5 1464 aa27.52■■■□□ 2
SCLT1-204ENST00000503215 CSRNP3Q8WYN3 585 aa27.49■■□□□ 1.99
SCLT1-204ENST00000503215 ASXL2Q76L83 1435 aa27.49■■□□□ 1.99
SCLT1-204ENST00000503215 CTTNBP2Q8WZ74 1663 aa27.49■■□□□ 1.99
SCLT1-204ENST00000503215 KDM5BQ9UGL1 1544 aa27.42■■□□□ 1.98
SCLT1-204ENST00000503215 TSPOAP1O95153 1857 aa27.42■■□□□ 1.98
SCLT1-204ENST00000503215 PLB1Q6P1J6 1458 aa27.41■■□□□ 1.98
SCLT1-204ENST00000503215 FAM9AQ8IZU1 332 aaPredicted RBP27.39■■□□□ 1.98
SCLT1-204ENST00000503215 GOLGA3Q08378 1498 aa27.39■■□□□ 1.98
SCLT1-204ENST00000503215 P3H3Q8IVL6 736 aa27.37■■□□□ 1.97
SCLT1-204ENST00000503215 ZCCHC11Q5TAX3 1644 aaKnown RBP27.34■■□□□ 1.97
SCLT1-204ENST00000503215 AEBP2Q6ZN18 517 aaPredicted RBP27.33■■□□□ 1.97
SCLT1-204ENST00000503215 GLI2P10070 1586 aa27.31■■□□□ 1.96
SCLT1-204ENST00000503215 EPRSP07814 1512 aaKnown RBP27.3■■□□□ 1.96
SCLT1-204ENST00000503215 ABCA8O94911 1581 aa27.3■■□□□ 1.96
SCLT1-204ENST00000503215 EEA1Q15075 1411 aa27.29■■□□□ 1.96
SCLT1-204ENST00000503215 KDM6BO15054 1643 aa27.27■■□□□ 1.96
SCLT1-204ENST00000503215 PPRC1Q5VV67 1664 aaKnown RBP27.26■■□□□ 1.95
SCLT1-204ENST00000503215 ARID3CA6NKF2 412 aa27.24■■□□□ 1.95
SCLT1-204ENST00000503215 RANGAP1P46060 587 aaPredicted RBP27.24■■□□□ 1.95
SCLT1-204ENST00000503215 CHIC1Q5VXU3 224 aa27.24■■□□□ 1.95
SCLT1-204ENST00000503215 WDR7Q9Y4E6 1490 aa27.22■■□□□ 1.95
SCLT1-204ENST00000503215 KCNH8Q96L42 1107 aa27.2■■□□□ 1.94
SCLT1-204ENST00000503215 MAP3K4Q9Y6R4 1608 aa27.17■■□□□ 1.94
SCLT1-204ENST00000503215 SAMD9Q5K651 1589 aa27.17■■□□□ 1.94
SCLT1-204ENST00000503215 COL17A1Q9UMD9 1497 aaPredicted RBP27.16■■□□□ 1.94
SCLT1-204ENST00000503215 EHMT2Q96KQ7 1210 aa27.14■■□□□ 1.94
SCLT1-204ENST00000503215 ATP10BO94823 1461 aa27.12■■□□□ 1.93
SCLT1-204ENST00000503215 FHOD3Q2V2M9 1422 aa27.08■■□□□ 1.93
SCLT1-204ENST00000503215 KIF21BO75037 1637 aa27.07■■□□□ 1.92
SCLT1-204ENST00000503215 KDM4FA0A1W2PPD8 638 aa27.07■■□□□ 1.92
SCLT1-204ENST00000503215 CD109Q6YHK3 1445 aa27.06■■□□□ 1.92
SCLT1-204ENST00000503215 TEX14Q8IWB6 1497 aa27.05■■□□□ 1.92
SCLT1-204ENST00000503215 RAPGEF6Q8TEU7 1601 aa27.01■■□□□ 1.92
SCLT1-204ENST00000503215 MAGI3Q5TCQ9 1506 aa26.99■■□□□ 1.91
SCLT1-204ENST00000503215 UBTFP17480 764 aaKnown RBP26.98■■□□□ 1.91
SCLT1-204ENST00000503215 NUP153P49790 1475 aaKnown RBP26.98■■□□□ 1.91
SCLT1-204ENST00000503215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.97■■□□□ 1.91
SCLT1-204ENST00000503215 HNRNPUL2Q1KMD3 747 aaKnown RBP26.97■■□□□ 1.91
SCLT1-204ENST00000503215 CFAP43Q8NDM7 1665 aa26.96■■□□□ 1.91
SCLT1-204ENST00000503215 EFCAB5A4FU69 1503 aa26.89■■□□□ 1.9
SCLT1-204ENST00000503215 ABCA9Q8IUA7 1624 aa26.84■■□□□ 1.89
SCLT1-204ENST00000503215 PLEKHD1A6NEE1 506 aa26.82■■□□□ 1.88
SCLT1-204ENST00000503215 ADGRL1O94910 1474 aa26.8■■□□□ 1.88
SCLT1-204ENST00000503215 ARHGAP35Q9NRY4 1499 aa26.8■■□□□ 1.88
SCLT1-204ENST00000503215 ARAP3Q8WWN8 1544 aa26.78■■□□□ 1.88
SCLT1-204ENST00000503215 CDK13Q14004 1512 aaKnown RBP26.76■■□□□ 1.87
SCLT1-204ENST00000503215 ATP1B4Q9UN42 357 aaPredicted RBP26.75■■□□□ 1.87
SCLT1-204ENST00000503215 RAPGEF3O95398 923 aa26.74■■□□□ 1.87
SCLT1-204ENST00000503215 PHLDB1Q86UU1 1377 aa26.7■■□□□ 1.86
SCLT1-204ENST00000503215 NEO1Q92859 1461 aa26.68■■□□□ 1.86
SCLT1-204ENST00000503215 FMN1Q68DA7 1419 aa26.68■■□□□ 1.86
SCLT1-204ENST00000503215 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.67■■□□□ 1.867e-7■■□□□ 14.3
SCLT1-204ENST00000503215 TTC37Q6PGP7 1564 aa26.63■■□□□ 1.85
SCLT1-204ENST00000503215 FRMPD1Q5SYB0 1578 aa26.6■■□□□ 1.85
SCLT1-204ENST00000503215 HECW1Q76N89 1606 aa26.59■■□□□ 1.85
SCLT1-204ENST00000503215 AKNAQ7Z591 1439 aa26.59■■□□□ 1.85
SCLT1-204ENST00000503215 FANCAO15360 1455 aa26.58■■□□□ 1.85
SCLT1-204ENST00000503215 DENND4BO75064 1496 aaPredicted RBP26.53■■□□□ 1.84
SCLT1-204ENST00000503215 CDK11AQ9UQ88 783 aaPredicted RBP26.52■■□□□ 1.84
SCLT1-204ENST00000503215 LRRIQ1Q96JM4 1722 aa26.51■■□□□ 1.83
SCLT1-204ENST00000503215 PLCH2O75038 1416 aa26.51■■□□□ 1.83
SCLT1-204ENST00000503215 KIF14Q15058 1648 aa26.49■■□□□ 1.83
SCLT1-204ENST00000503215 TROQ12816 1431 aaPredicted RBP26.48■■□□□ 1.83
SCLT1-204ENST00000503215 RICTORQ6R327 1708 aa26.47■■□□□ 1.83
SCLT1-204ENST00000503215 CASKIN1Q8WXD9 1431 aa26.47■■□□□ 1.83
SCLT1-204ENST00000503215 PCF11O94913 1555 aaKnown RBP26.46■■□□□ 1.83
SCLT1-204ENST00000503215 CLIP1P30622 1438 aa26.45■■□□□ 1.82
SCLT1-204ENST00000503215 CFAP74Q9C0B2 1584 aa26.45■■□□□ 1.82
SCLT1-204ENST00000503215 SCAPERQ9BY12 1400 aa26.43■■□□□ 1.82
SCLT1-204ENST00000503215 ARID4BQ4LE39 1312 aaPredicted RBP26.43■■□□□ 1.82
SCLT1-204ENST00000503215 EFCAB2Q5VUJ9 269 aa26.42■■□□□ 1.82
SCLT1-204ENST00000503215 YEATS2Q9ULM3 1422 aa26.41■■□□□ 1.82
SCLT1-204ENST00000503215 ARHGEF40Q8TER5 1519 aa26.39■■□□□ 1.82
SCLT1-204ENST00000503215 ADAMTSL3P82987 1691 aa26.38■■□□□ 1.81
SCLT1-204ENST00000503215 POGZQ7Z3K3 1410 aa26.37■■□□□ 1.81
SCLT1-204ENST00000503215 ZMYM4Q5VZL5 1548 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms