RNA–Protein interactions for RNA: ENST00000503084.1

TNPO1-202, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 623 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-202ENST00000503084 ADGRL1O94910 1474 aa21.65■■□□□ 1.06
TNPO1-202ENST00000503084 PRG4Q92954 1404 aaPredicted RBP21.63■■□□□ 1.05
TNPO1-202ENST00000503084 TSPOAP1O95153 1857 aa21.62■■□□□ 1.05
TNPO1-202ENST00000503084 ADCY10Q96PN6 1610 aa21.58■■□□□ 1.05
TNPO1-202ENST00000503084 FHAD1B1AJZ9 1412 aa21.55■■□□□ 1.04
TNPO1-202ENST00000503084 NPM1P06748 294 aaKnown RBP eCLIP21.54■■□□□ 1.04
TNPO1-202ENST00000503084 FBXO41Q8TF61 875 aa21.48■■□□□ 1.03
TNPO1-202ENST00000503084 JPH4Q96JJ6 628 aa21.46■■□□□ 1.03
TNPO1-202ENST00000503084 RUSC2Q8N2Y8 1516 aa21.45■■□□□ 1.02
TNPO1-202ENST00000503084 PPRC1Q5VV67 1664 aaKnown RBP21.41■■□□□ 1.02
TNPO1-202ENST00000503084 ERICH3Q5RHP9 1530 aa21.4■■□□□ 1.02
TNPO1-202ENST00000503084 WRNQ14191 1432 aaPredicted RBP eCLIP21.39■■□□□ 1.02
TNPO1-202ENST00000503084 COL17A1Q9UMD9 1497 aaPredicted RBP21.32■■□□□ 1
TNPO1-202ENST00000503084 LMTK3Q96Q04 1460 aa21.28■■□□□ 1
TNPO1-202ENST00000503084 GLI2P10070 1586 aa21.27■■□□□ 1
TNPO1-202ENST00000503084 BIVM-ERCC5R4GMW8 1640 aa21.24■□□□□ 0.99
TNPO1-202ENST00000503084 TOP2BQ02880 1626 aa21.22■□□□□ 0.99
TNPO1-202ENST00000503084 ASXL2Q76L83 1435 aa21.22■□□□□ 0.99
TNPO1-202ENST00000503084 ABCC2Q92887 1545 aa21.2■□□□□ 0.98
TNPO1-202ENST00000503084 PLB1Q6P1J6 1458 aa21.2■□□□□ 0.98
TNPO1-202ENST00000503084 MAP3K4Q9Y6R4 1608 aa21.15■□□□□ 0.98
TNPO1-202ENST00000503084 KIAA0586Q9BVV6 1533 aa21.14■□□□□ 0.98
TNPO1-202ENST00000503084 PTPRGP23470 1445 aa21.13■□□□□ 0.97
TNPO1-202ENST00000503084 CUL7Q14999 1698 aa21.13■□□□□ 0.97
TNPO1-202ENST00000503084 TEX14Q8IWB6 1497 aa21.13■□□□□ 0.97
TNPO1-202ENST00000503084 EPRSP07814 1512 aaKnown RBP21.1■□□□□ 0.97
TNPO1-202ENST00000503084 TTBK1Q5TCY1 1321 aaPredicted RBP21.08■□□□□ 0.97
TNPO1-202ENST00000503084 SOCS7O14512 581 aa21.03■□□□□ 0.96
TNPO1-202ENST00000503084 ILDR2Q71H61 639 aa21.03■□□□□ 0.96
TNPO1-202ENST00000503084 KIF21BO75037 1637 aa21.03■□□□□ 0.96
TNPO1-202ENST00000503084 UHRF1BP1LA0JNW5 1464 aa21.02■□□□□ 0.96
TNPO1-202ENST00000503084 TNIKQ9UKE5 1360 aa21.01■□□□□ 0.95
TNPO1-202ENST00000503084 UACAQ9BZF9 1416 aa20.95■□□□□ 0.95
TNPO1-202ENST00000503084 KDM5BQ9UGL1 1544 aa20.95■□□□□ 0.94
TNPO1-202ENST00000503084 CARMIL2Q6F5E8 1435 aa20.95■□□□□ 0.94
TNPO1-202ENST00000503084 DISP3Q9P2K9 1392 aa20.94■□□□□ 0.94
TNPO1-202ENST00000503084 PTPRMP28827 1452 aa20.94■□□□□ 0.94
TNPO1-202ENST00000503084 PCF11O94913 1555 aaKnown RBP20.93■□□□□ 0.94
TNPO1-202ENST00000503084 ZCCHC11Q5TAX3 1644 aaKnown RBP20.93■□□□□ 0.94
TNPO1-202ENST00000503084 ADAMTSL3P82987 1691 aa20.89■□□□□ 0.93
TNPO1-202ENST00000503084 CHIC1Q5VXU3 224 aa20.87■□□□□ 0.93
TNPO1-202ENST00000503084 WDR7Q9Y4E6 1490 aa20.87■□□□□ 0.93
TNPO1-202ENST00000503084 IGF1RP08069 1367 aa20.85■□□□□ 0.93
TNPO1-202ENST00000503084 MAGI3Q5TCQ9 1506 aa20.85■□□□□ 0.93
TNPO1-202ENST00000503084 IQGAP2Q13576 1575 aa20.85■□□□□ 0.93
TNPO1-202ENST00000503084 DISP1Q96F81 1524 aa20.83■□□□□ 0.92
TNPO1-202ENST00000503084 CFAP43Q8NDM7 1665 aa20.81■□□□□ 0.92
TNPO1-202ENST00000503084 CD109Q6YHK3 1445 aa20.8■□□□□ 0.92
TNPO1-202ENST00000503084 SPATA31D1Q6ZQQ2 1576 aa20.78■□□□□ 0.92
TNPO1-202ENST00000503084 CERKQ8TCT0 537 aa20.77■□□□□ 0.92
TNPO1-202ENST00000503084 MADDQ8WXG6 1647 aa20.77■□□□□ 0.92
TNPO1-202ENST00000503084 KIF27Q86VH2 1401 aa20.74■□□□□ 0.91
TNPO1-202ENST00000503084 BCORL1Q5H9F3 1711 aa20.73■□□□□ 0.91
TNPO1-202ENST00000503084 ARAP3Q8WWN8 1544 aa20.71■□□□□ 0.91
TNPO1-202ENST00000503084 HSPA2P54652 639 aa20.7■□□□□ 0.9
TNPO1-202ENST00000503084 CARMIL1Q5VZK9 1371 aa20.69■□□□□ 0.9
TNPO1-202ENST00000503084 KIAA0556O60303 1618 aa20.68■□□□□ 0.9
TNPO1-202ENST00000503084 UGGT2Q9NYU1 1516 aa20.67■□□□□ 0.9
TNPO1-202ENST00000503084 RIMS1Q86UR5 1692 aaKnown RBP20.65■□□□□ 0.9
TNPO1-202ENST00000503084 KCNH8Q96L42 1107 aa20.63■□□□□ 0.89
TNPO1-202ENST00000503084 ARID4BQ4LE39 1312 aaPredicted RBP20.57■□□□□ 0.88
TNPO1-202ENST00000503084 FRMPD1Q5SYB0 1578 aa20.57■□□□□ 0.88
TNPO1-202ENST00000503084 ABCA8O94911 1581 aa20.55■□□□□ 0.88
TNPO1-202ENST00000503084 RAPGEF3O95398 923 aa20.54■□□□□ 0.88
TNPO1-202ENST00000503084 SUPT5HO00267 1087 aaKnown RBP20.53■□□□□ 0.88
TNPO1-202ENST00000503084 ARHGEF40Q8TER5 1519 aa20.53■□□□□ 0.88
TNPO1-202ENST00000503084 PLPPR3Q6T4P5 718 aa20.5■□□□□ 0.87
TNPO1-202ENST00000503084 PHLDB1Q86UU1 1377 aa20.48■□□□□ 0.87
TNPO1-202ENST00000503084 ABCA9Q8IUA7 1624 aa20.48■□□□□ 0.87
TNPO1-202ENST00000503084 NEO1Q92859 1461 aa20.45■□□□□ 0.86
TNPO1-202ENST00000503084 SIGLEC1Q9BZZ2 1709 aa20.4■□□□□ 0.86
TNPO1-202ENST00000503084 RAPGEF2Q9Y4G8 1499 aa20.4■□□□□ 0.86
TNPO1-202ENST00000503084 TTC37Q6PGP7 1564 aa20.38■□□□□ 0.85
TNPO1-202ENST00000503084 FANCAO15360 1455 aa20.37■□□□□ 0.85
TNPO1-202ENST00000503084 ARID3CA6NKF2 412 aa20.37■□□□□ 0.85
TNPO1-202ENST00000503084 POGZQ7Z3K3 1410 aa20.36■□□□□ 0.85
TNPO1-202ENST00000503084 YEATS2Q9ULM3 1422 aa20.36■□□□□ 0.85
TNPO1-202ENST00000503084 FER1L4A9Z1Z3 1794 aa20.36■□□□□ 0.85
TNPO1-202ENST00000503084 STRCQ7RTU9 1775 aa20.36■□□□□ 0.85
TNPO1-202ENST00000503084 PREX1Q8TCU6 1659 aa20.36■□□□□ 0.85
TNPO1-202ENST00000503084 GOLGA3Q08378 1498 aa20.36■□□□□ 0.85
TNPO1-202ENST00000503084 RICTORQ6R327 1708 aa20.36■□□□□ 0.85
TNPO1-202ENST00000503084 CTTNBP2Q8WZ74 1663 aa20.33■□□□□ 0.85
TNPO1-202ENST00000503084 ATP10BO94823 1461 aa20.33■□□□□ 0.85
TNPO1-202ENST00000503084 AKNAQ7Z591 1439 aa20.31■□□□□ 0.84
TNPO1-202ENST00000503084 DENND4BO75064 1496 aaPredicted RBP20.3■□□□□ 0.84
TNPO1-202ENST00000503084 ZMYM4Q5VZL5 1548 aa20.28■□□□□ 0.84
TNPO1-202ENST00000503084 FHOD3Q2V2M9 1422 aa20.27■□□□□ 0.84
TNPO1-202ENST00000503084 ZFYVE16Q7Z3T8 1539 aa20.27■□□□□ 0.84
TNPO1-202ENST00000503084 DMRT2Q9Y5R5 561 aa20.27■□□□□ 0.84
TNPO1-202ENST00000503084 LTBP4Q8N2S1 1624 aa20.27■□□□□ 0.83
TNPO1-202ENST00000503084 MLECQ14165 292 aa20.26■□□□□ 0.83
TNPO1-202ENST00000503084 EFCAB5A4FU69 1503 aa20.25■□□□□ 0.83
TNPO1-202ENST00000503084 IQSEC2Q5JU85 1478 aa20.24■□□□□ 0.83
TNPO1-202ENST00000503084 ARHGEF12Q9NZN5 1544 aa20.24■□□□□ 0.83
TNPO1-202ENST00000503084 PTPRTO14522 1441 aa20.22■□□□□ 0.83
TNPO1-202ENST00000503084 UHRF1BP1Q6BDS2 1440 aa20.19■□□□□ 0.82
TNPO1-202ENST00000503084 CFAP74Q9C0B2 1584 aa20.19■□□□□ 0.82
TNPO1-202ENST00000503084 CEBPAP49715 358 aaPredicted RBP20.17■□□□□ 0.82
TNPO1-202ENST00000503084 MAGI2Q86UL8 1455 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms