RNA–Protein interactions for RNA: ENST00000503000.1

ZFYVE28-202, Transcript of zinc finger FYVE-type containing 28, humanhuman

TSL 1 (best) BASIC

Gene ZFYVE28, Length 1,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28-202ENST00000503000 PBRM1Q86U86 1689 aa35.15■■■■□ 3.22
ZFYVE28-202ENST00000503000 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.12■■■■□ 3.21
ZFYVE28-202ENST00000503000 CCER1Q8TC90 406 aaPredicted RBP35.12■■■■□ 3.21
ZFYVE28-202ENST00000503000 KANK4Q5T7N3 995 aaPredicted RBP35.1■■■■□ 3.21
ZFYVE28-202ENST00000503000 ERCC6Q03468 1493 aa35.08■■■■□ 3.21
ZFYVE28-202ENST00000503000 AQRO60306 1485 aaKnown RBP eCLIP35.04■■■■□ 3.21e-6■■□□□ 11.4
ZFYVE28-202ENST00000503000 GRIN2BQ13224 1484 aa35.04■■■■□ 3.2
ZFYVE28-202ENST00000503000 TIAM1Q13009 1591 aa35.03■■■■□ 3.2
ZFYVE28-202ENST00000503000 ADAMTS12P58397 1594 aa34.99■■■■□ 3.19
ZFYVE28-202ENST00000503000 FHOD3Q2V2M9 1422 aa34.98■■■■□ 3.19
ZFYVE28-202ENST00000503000 THOC2Q8NI27 1593 aaKnown RBP34.96■■■■□ 3.19
ZFYVE28-202ENST00000503000 P3H3Q8IVL6 736 aa34.95■■■■□ 3.19
ZFYVE28-202ENST00000503000 PCF11O94913 1555 aaKnown RBP34.95■■■■□ 3.19
ZFYVE28-202ENST00000503000 SAMD9Q5K651 1589 aa34.95■■■■□ 3.19
ZFYVE28-202ENST00000503000 FYCO1Q9BQS8 1478 aa34.94■■■■□ 3.18
ZFYVE28-202ENST00000503000 HNRNPUL2Q1KMD3 747 aaKnown RBP34.94■■■■□ 3.18
ZFYVE28-202ENST00000503000 RRBP1Q9P2E9 1410 aaKnown RBP34.94■■■■□ 3.18
ZFYVE28-202ENST00000503000 FMN1Q68DA7 1419 aa34.93■■■■□ 3.18
ZFYVE28-202ENST00000503000 CASKIN1Q8WXD9 1431 aa34.92■■■■□ 3.18
ZFYVE28-202ENST00000503000 CFAP43Q8NDM7 1665 aa34.91■■■■□ 3.18
ZFYVE28-202ENST00000503000 ZNF608Q9ULD9 1512 aaPredicted RBP34.9■■■■□ 3.18
ZFYVE28-202ENST00000503000 LRRC9Q6ZRR7 1453 aa34.88■■■■□ 3.17
ZFYVE28-202ENST00000503000 EIF4G3O43432 1585 aaKnown RBP34.8■■■■□ 3.16
ZFYVE28-202ENST00000503000 CCNB3Q8WWL7 1395 aa34.77■■■■□ 3.16
ZFYVE28-202ENST00000503000 IQGAP2Q13576 1575 aa34.77■■■■□ 3.16
ZFYVE28-202ENST00000503000 SNAPC4Q5SXM2 1469 aa34.76■■■■□ 3.15
ZFYVE28-202ENST00000503000 ATP1B4Q9UN42 357 aaPredicted RBP34.71■■■■□ 3.15
ZFYVE28-202ENST00000503000 MAGI1Q96QZ7 1491 aaPredicted RBP34.67■■■■□ 3.14
ZFYVE28-202ENST00000503000 UGGT2Q9NYU1 1516 aa34.63■■■■□ 3.13
ZFYVE28-202ENST00000503000 KIAA0586Q9BVV6 1533 aa34.62■■■■□ 3.13
ZFYVE28-202ENST00000503000 GRIN2AQ12879 1464 aa34.62■■■■□ 3.13
ZFYVE28-202ENST00000503000 PHLDB1Q86UU1 1377 aa34.58■■■■□ 3.13
ZFYVE28-202ENST00000503000 SYNJ2O15056 1496 aa34.53■■■■□ 3.12
ZFYVE28-202ENST00000503000 LRRIQ1Q96JM4 1722 aa34.5■■■■□ 3.11
ZFYVE28-202ENST00000503000 CCDC18Q5T9S5 1454 aa34.49■■■■□ 3.11
ZFYVE28-202ENST00000503000 MTUS2Q5JR59 1369 aa34.47■■■■□ 3.11
ZFYVE28-202ENST00000503000 HECW1Q76N89 1606 aa34.46■■■■□ 3.11
ZFYVE28-202ENST00000503000 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.45■■■■□ 3.119e-7■■■■■ 28.8
ZFYVE28-202ENST00000503000 CLSPNQ9HAW4 1339 aa34.45■■■■□ 3.11
ZFYVE28-202ENST00000503000 CHMP7Q8WUX9 453 aaPredicted RBP34.45■■■■□ 3.11
ZFYVE28-202ENST00000503000 KIAA0556O60303 1618 aa34.4■■■■□ 3.1
ZFYVE28-202ENST00000503000 EHBP1L1Q8N3D4 1523 aa34.4■■■■□ 3.1
ZFYVE28-202ENST00000503000 DISP1Q96F81 1524 aa34.38■■■■□ 3.09
ZFYVE28-202ENST00000503000 CEP170Q5SW79 1584 aa34.36■■■■□ 3.09
ZFYVE28-202ENST00000503000 DHX57Q6P158 1386 aaKnown RBP34.35■■■■□ 3.09
ZFYVE28-202ENST00000503000 SUPT6HQ7KZ85 1726 aaKnown RBP34.34■■■■□ 3.09
ZFYVE28-202ENST00000503000 ITGAEP38570 1179 aa34.33■■■■□ 3.09
ZFYVE28-202ENST00000503000 FAM50AQ14320 339 aaKnown RBP34.33■■■■□ 3.09
ZFYVE28-202ENST00000503000 NUP160Q12769 1436 aa34.33■■■■□ 3.09
ZFYVE28-202ENST00000503000 EPRSP07814 1512 aaKnown RBP34.31■■■■□ 3.08
ZFYVE28-202ENST00000503000 FGD6Q6ZV73 1430 aa34.31■■■■□ 3.08
ZFYVE28-202ENST00000503000 NCOA2Q15596 1464 aa34.29■■■■□ 3.08
ZFYVE28-202ENST00000503000 FBLN2P98095 1184 aa34.25■■■■□ 3.07
ZFYVE28-202ENST00000503000 SETD5Q9C0A6 1442 aa34.24■■■■□ 3.07
ZFYVE28-202ENST00000503000 ARHGEF11O15085 1522 aa34.24■■■■□ 3.07
ZFYVE28-202ENST00000503000 MYOM3Q5VTT5 1437 aa34.24■■■■□ 3.07
ZFYVE28-202ENST00000503000 MAGI3Q5TCQ9 1506 aa34.21■■■■□ 3.07
ZFYVE28-202ENST00000503000 RAB3GAP2Q9H2M9 1393 aa34.21■■■■□ 3.07
ZFYVE28-202ENST00000503000 CARMIL2Q6F5E8 1435 aa34.18■■■■□ 3.06
ZFYVE28-202ENST00000503000 RAPGEF6Q8TEU7 1601 aa34.17■■■■□ 3.06
ZFYVE28-202ENST00000503000 CDK13Q14004 1512 aaKnown RBP34.15■■■■□ 3.06
ZFYVE28-202ENST00000503000 JPH4Q96JJ6 628 aa34.14■■■■□ 3.06
ZFYVE28-202ENST00000503000 NUP153P49790 1475 aaKnown RBP34.09■■■■□ 3.05
ZFYVE28-202ENST00000503000 PTPN23Q9H3S7 1636 aa34.06■■■■□ 3.04
ZFYVE28-202ENST00000503000 TCOF1Q13428 1488 aaKnown RBP34.03■■■■□ 3.04
ZFYVE28-202ENST00000503000 CDK11AQ9UQ88 783 aaPredicted RBP34.03■■■■□ 3.04
ZFYVE28-202ENST00000503000 MIA2Q96PC5 1412 aa34.01■■■■□ 3.04
ZFYVE28-202ENST00000503000 ZNF316A6NFI3 1004 aaPredicted RBP33.99■■■■□ 3.03
ZFYVE28-202ENST00000503000 HFM1A2PYH4 1435 aa33.93■■■■□ 3.02
ZFYVE28-202ENST00000503000 PLB1Q6P1J6 1458 aa33.93■■■■□ 3.02
ZFYVE28-202ENST00000503000 ARID3CA6NKF2 412 aa33.93■■■■□ 3.02
ZFYVE28-202ENST00000503000 PTPRKQ15262 1439 aa33.92■■■■□ 3.02
ZFYVE28-202ENST00000503000 CHD1O14646 1710 aa33.92■■■■□ 3.02
ZFYVE28-202ENST00000503000 MAPKBP1O60336 1514 aa33.91■■■■□ 3.02
ZFYVE28-202ENST00000503000 ABCA8O94911 1581 aa33.86■■■■□ 3.01
ZFYVE28-202ENST00000503000 TROQ12816 1431 aaPredicted RBP33.86■■■■□ 3.01
ZFYVE28-202ENST00000503000 DIEXFQ68CQ4 756 aaKnown RBP33.86■■■■□ 3.01
ZFYVE28-202ENST00000503000 PRG4Q92954 1404 aaPredicted RBP33.82■■■■□ 3
ZFYVE28-202ENST00000503000 NAIPQ13075 1403 aa33.8■■■■□ 3
ZFYVE28-202ENST00000503000 AKNAQ7Z591 1439 aa33.79■■■■□ 3
ZFYVE28-202ENST00000503000 ADCY10Q96PN6 1610 aa33.78■■■■□ 3
ZFYVE28-202ENST00000503000 SHROOM2Q13796 1616 aa33.76■■■□□ 2.99
ZFYVE28-202ENST00000503000 UACAQ9BZF9 1416 aa33.73■■■□□ 2.99
ZFYVE28-202ENST00000503000 PTPRGP23470 1445 aa33.72■■■□□ 2.99
ZFYVE28-202ENST00000503000 GCC2Q8IWJ2 1684 aa33.71■■■□□ 2.99
ZFYVE28-202ENST00000503000 ITSN2Q9NZM3 1697 aa33.7■■■□□ 2.99
ZFYVE28-202ENST00000503000 ATP10BO94823 1461 aa33.68■■■□□ 2.98
ZFYVE28-202ENST00000503000 TIMELESSQ9UNS1 1208 aa33.68■■■□□ 2.98
ZFYVE28-202ENST00000503000 PLEKHD1A6NEE1 506 aa33.65■■■□□ 2.98
ZFYVE28-202ENST00000503000 DNMT1P26358 1616 aaKnown RBP33.64■■■□□ 2.98
ZFYVE28-202ENST00000503000 DAPK1P53355 1430 aa33.62■■■□□ 2.97
ZFYVE28-202ENST00000503000 ACIN1Q9UKV3 1341 aaKnown RBP33.62■■■□□ 2.97
ZFYVE28-202ENST00000503000 KIF14Q15058 1648 aa33.62■■■□□ 2.97
ZFYVE28-202ENST00000503000 ROCK1Q13464 1354 aa33.61■■■□□ 2.97
ZFYVE28-202ENST00000503000 GPATCH8Q9UKJ3 1502 aaKnown RBP33.61■■■□□ 2.97
ZFYVE28-202ENST00000503000 CHIC2Q9UKJ5 165 aa33.59■■■□□ 2.97
ZFYVE28-202ENST00000503000 RRP7BPQ9NSQ0 103 aa33.58■■■□□ 2.97
ZFYVE28-202ENST00000503000 CFDP1Q9UEE9 299 aaPredicted RBP33.57■■■□□ 2.96
ZFYVE28-202ENST00000503000 ABCC5O15440 1437 aa33.57■■■□□ 2.96
ZFYVE28-202ENST00000503000 CAMSAP2Q08AD1 1489 aa33.53■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms