RNA–Protein interactions for RNA: ENST00000502955.5

DDR1-247, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-247ENST00000502955 RUSC2Q8N2Y8 1516 aa24.49■■□□□ 1.51
DDR1-247ENST00000502955 MAPKBP1O60336 1514 aa24.37■■□□□ 1.49
DDR1-247ENST00000502955 ABCC10Q5T3U5 1492 aa24.36■■□□□ 1.49
DDR1-247ENST00000502955 KIAA0586Q9BVV6 1533 aa24.35■■□□□ 1.49
DDR1-247ENST00000502955 ADCY10Q96PN6 1610 aa24.32■■□□□ 1.48
DDR1-247ENST00000502955 IGF1RP08069 1367 aa24.32■■□□□ 1.48
DDR1-247ENST00000502955 CUL7Q14999 1698 aa24.32■■□□□ 1.48
DDR1-247ENST00000502955 KIF27Q86VH2 1401 aa24.3■■□□□ 1.48
DDR1-247ENST00000502955 NPM1P06748 294 aaKnown RBP eCLIP24.3■■□□□ 1.48
DDR1-247ENST00000502955 DIP2BQ9P265 1576 aa24.29■■□□□ 1.48
DDR1-247ENST00000502955 FAM69CQ0P6D2 419 aa24.28■■□□□ 1.48
DDR1-247ENST00000502955 CARMIL1Q5VZK9 1371 aa24.14■■□□□ 1.45
DDR1-247ENST00000502955 PTPRGP23470 1445 aa24.12■■□□□ 1.45
DDR1-247ENST00000502955 KDM6BO15054 1643 aa24.11■■□□□ 1.45
DDR1-247ENST00000502955 CARMIL2Q6F5E8 1435 aa24.09■■□□□ 1.45
DDR1-247ENST00000502955 TNIKQ9UKE5 1360 aa24.08■■□□□ 1.45
DDR1-247ENST00000502955 ABCC2Q92887 1545 aa24.07■■□□□ 1.44
DDR1-247ENST00000502955 IQGAP2Q13576 1575 aa24.06■■□□□ 1.44
DDR1-247ENST00000502955 TSPOAP1O95153 1857 aa24.06■■□□□ 1.44
DDR1-247ENST00000502955 UHRF1BP1LA0JNW5 1464 aa24.02■■□□□ 1.44
DDR1-247ENST00000502955 PLB1Q6P1J6 1458 aa24■■□□□ 1.43
DDR1-247ENST00000502955 GLI2P10070 1586 aa23.99■■□□□ 1.43
DDR1-247ENST00000502955 ASXL2Q76L83 1435 aa23.99■■□□□ 1.43
DDR1-247ENST00000502955 DISP1Q96F81 1524 aa23.98■■□□□ 1.43
DDR1-247ENST00000502955 KDM4FA0A1W2PPD8 638 aa23.97■■□□□ 1.43
DDR1-247ENST00000502955 UACAQ9BZF9 1416 aa23.95■■□□□ 1.42
DDR1-247ENST00000502955 PPRC1Q5VV67 1664 aaKnown RBP23.94■■□□□ 1.42
DDR1-247ENST00000502955 TTBK1Q5TCY1 1321 aaPredicted RBP23.93■■□□□ 1.42
DDR1-247ENST00000502955 UGGT2Q9NYU1 1516 aa23.93■■□□□ 1.42
DDR1-247ENST00000502955 RAPGEF2Q9Y4G8 1499 aa23.91■■□□□ 1.42
DDR1-247ENST00000502955 KDM5BQ9UGL1 1544 aa23.9■■□□□ 1.42
DDR1-247ENST00000502955 EPRSP07814 1512 aaKnown RBP23.85■■□□□ 1.41
DDR1-247ENST00000502955 KIAA0556O60303 1618 aa23.85■■□□□ 1.41
DDR1-247ENST00000502955 MAP3K4Q9Y6R4 1608 aa23.84■■□□□ 1.41
DDR1-247ENST00000502955 ZCCHC11Q5TAX3 1644 aaKnown RBP23.82■■□□□ 1.4
DDR1-247ENST00000502955 TEX14Q8IWB6 1497 aa23.78■■□□□ 1.4
DDR1-247ENST00000502955 COL17A1Q9UMD9 1497 aaPredicted RBP23.77■■□□□ 1.4
DDR1-247ENST00000502955 CTTNBP2Q8WZ74 1663 aa23.73■■□□□ 1.39
DDR1-247ENST00000502955 WDR7Q9Y4E6 1490 aa23.73■■□□□ 1.39
DDR1-247ENST00000502955 ADGRL1O94910 1474 aa23.72■■□□□ 1.39
DDR1-247ENST00000502955 GOLGA3Q08378 1498 aa23.69■■□□□ 1.38
DDR1-247ENST00000502955 ABCA8O94911 1581 aa23.65■■□□□ 1.38
DDR1-247ENST00000502955 CFAP43Q8NDM7 1665 aa23.63■■□□□ 1.37
DDR1-247ENST00000502955 MAGI3Q5TCQ9 1506 aa23.63■■□□□ 1.37
DDR1-247ENST00000502955 PRXQ9BXM0 1461 aa23.62■■□□□ 1.37
DDR1-247ENST00000502955 CD109Q6YHK3 1445 aa23.59■■□□□ 1.37
DDR1-247ENST00000502955 KCNH8Q96L42 1107 aa23.51■■□□□ 1.35
DDR1-247ENST00000502955 HECW2Q9P2P5 1572 aa23.48■■□□□ 1.35
DDR1-247ENST00000502955 ARAP3Q8WWN8 1544 aa23.46■■□□□ 1.35
DDR1-247ENST00000502955 ILDR1Q86SU0 546 aaPredicted RBP23.45■■□□□ 1.34
DDR1-247ENST00000502955 ATP10BO94823 1461 aa23.43■■□□□ 1.34
DDR1-247ENST00000502955 FAM9AQ8IZU1 332 aaPredicted RBP23.43■■□□□ 1.34
DDR1-247ENST00000502955 SAMD9Q5K651 1589 aa23.4■■□□□ 1.34
DDR1-247ENST00000502955 ABCA9Q8IUA7 1624 aa23.4■■□□□ 1.34
DDR1-247ENST00000502955 PHLDB1Q86UU1 1377 aa23.4■■□□□ 1.34
DDR1-247ENST00000502955 KIF21BO75037 1637 aa23.37■■□□□ 1.33
DDR1-247ENST00000502955 P3H3Q8IVL6 736 aa23.34■■□□□ 1.33
DDR1-247ENST00000502955 RAPGEF6Q8TEU7 1601 aa23.33■■□□□ 1.33
DDR1-247ENST00000502955 CSRNP3Q8WYN3 585 aa23.32■■□□□ 1.32
DDR1-247ENST00000502955 NEO1Q92859 1461 aa23.31■■□□□ 1.32
DDR1-247ENST00000502955 ARID3CA6NKF2 412 aa23.31■■□□□ 1.32
DDR1-247ENST00000502955 ADAMTSL3P82987 1691 aa23.25■■□□□ 1.31
DDR1-247ENST00000502955 NUP153P49790 1475 aaKnown RBP23.25■■□□□ 1.31
DDR1-247ENST00000502955 EEA1Q15075 1411 aa23.24■■□□□ 1.31
DDR1-247ENST00000502955 FRMPD1Q5SYB0 1578 aa23.23■■□□□ 1.31
DDR1-247ENST00000502955 RAPGEF3O95398 923 aa23.22■■□□□ 1.31
DDR1-247ENST00000502955 PTPRMP28827 1452 aa23.21■■□□□ 1.31
DDR1-247ENST00000502955 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.18■■□□□ 1.3
DDR1-247ENST00000502955 HNRNPUL2Q1KMD3 747 aaKnown RBP23.18■■□□□ 1.3
DDR1-247ENST00000502955 BCORL1Q5H9F3 1711 aa23.17■■□□□ 1.3
DDR1-247ENST00000502955 FHOD3Q2V2M9 1422 aa23.16■■□□□ 1.3
DDR1-247ENST00000502955 PLEKHD1A6NEE1 506 aa23.12■■□□□ 1.29
DDR1-247ENST00000502955 RICTORQ6R327 1708 aa23.12■■□□□ 1.29
DDR1-247ENST00000502955 EFCAB5A4FU69 1503 aa23.12■■□□□ 1.29
DDR1-247ENST00000502955 ARHGEF40Q8TER5 1519 aa23.12■■□□□ 1.29
DDR1-247ENST00000502955 CFAP74Q9C0B2 1584 aa23.11■■□□□ 1.29
DDR1-247ENST00000502955 MADDQ8WXG6 1647 aa23.1■■□□□ 1.29
DDR1-247ENST00000502955 DENND4BO75064 1496 aaPredicted RBP23.1■■□□□ 1.29
DDR1-247ENST00000502955 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.09■■□□□ 1.296e-7■■■■□ 21.9
DDR1-247ENST00000502955 AKNAQ7Z591 1439 aa23.08■■□□□ 1.29
DDR1-247ENST00000502955 FANCAO15360 1455 aa23.08■■□□□ 1.29
DDR1-247ENST00000502955 RANGAP1P46060 587 aaPredicted RBP23.06■■□□□ 1.28
DDR1-247ENST00000502955 ARID4BQ4LE39 1312 aaPredicted RBP23.06■■□□□ 1.28
DDR1-247ENST00000502955 PCF11O94913 1555 aaKnown RBP23.06■■□□□ 1.28
DDR1-247ENST00000502955 ZMYM4Q5VZL5 1548 aa23.05■■□□□ 1.28
DDR1-247ENST00000502955 TTC37Q6PGP7 1564 aa23.05■■□□□ 1.28
DDR1-247ENST00000502955 LMTK3Q96Q04 1460 aa23.03■■□□□ 1.28
DDR1-247ENST00000502955 FBXO41Q8TF61 875 aa23.02■■□□□ 1.28
DDR1-247ENST00000502955 MAGI2Q86UL8 1455 aa23■■□□□ 1.27
DDR1-247ENST00000502955 RIMS1Q86UR5 1692 aaKnown RBP23■■□□□ 1.27
DDR1-247ENST00000502955 ZFYVE16Q7Z3T8 1539 aa22.98■■□□□ 1.27
DDR1-247ENST00000502955 POGZQ7Z3K3 1410 aa22.97■■□□□ 1.27
DDR1-247ENST00000502955 CDK13Q14004 1512 aaKnown RBP22.97■■□□□ 1.27
DDR1-247ENST00000502955 PLCH2O75038 1416 aa22.96■■□□□ 1.27
DDR1-247ENST00000502955 SIGLEC1Q9BZZ2 1709 aa22.95■■□□□ 1.26
DDR1-247ENST00000502955 YEATS2Q9ULM3 1422 aa22.94■■□□□ 1.26
DDR1-247ENST00000502955 HECW1Q76N89 1606 aa22.93■■□□□ 1.26
DDR1-247ENST00000502955 FMN1Q68DA7 1419 aa22.91■■□□□ 1.26
DDR1-247ENST00000502955 SCAPERQ9BY12 1400 aa22.9■■□□□ 1.26
DDR1-247ENST00000502955 MYO5CQ9NQX4 1742 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms