RNA–Protein interactions for RNA: ENST00000498550.5

PDS5B-209, Transcript of PDS5 cohesin associated factor B, humanhuman

TSL 1 (best)

Gene PDS5B, Length 4,238 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5B-209ENST00000498550 CNKSR2Q8WXI2 1034 aa6.93□□□□□ -1.3
PDS5B-209ENST00000498550 CSRNP3Q8WYN3 585 aa6.9□□□□□ -1.3
PDS5B-209ENST00000498550 SIGLEC1Q9BZZ2 1709 aa6.89□□□□□ -1.31
PDS5B-209ENST00000498550 POLA1P09884 1462 aaPredicted RBP6.88□□□□□ -1.31
PDS5B-209ENST00000498550 ABCC10Q5T3U5 1492 aa6.85□□□□□ -1.31
PDS5B-209ENST00000498550 HECW2Q9P2P5 1572 aa6.85□□□□□ -1.31
PDS5B-209ENST00000498550 ATF5Q9Y2D1 282 aaPredicted RBP6.84□□□□□ -1.31
PDS5B-209ENST00000498550 ABCA10Q8WWZ4 1543 aa6.84□□□□□ -1.31
PDS5B-209ENST00000498550 KDM5BQ9UGL1 1544 aa6.84□□□□□ -1.31
PDS5B-209ENST00000498550 SYNJ2O15056 1496 aa6.84□□□□□ -1.31
PDS5B-209ENST00000498550 CUX1P39880 1505 aa6.84□□□□□ -1.31
PDS5B-209ENST00000498550 FRMPD1Q5SYB0 1578 aa6.81□□□□□ -1.32
PDS5B-209ENST00000498550 FER1L4A9Z1Z3 1794 aa6.78□□□□□ -1.32
PDS5B-209ENST00000498550 OSCARQ8IYS5 282 aa6.78□□□□□ -1.32
PDS5B-209ENST00000498550 ERICH3Q5RHP9 1530 aa6.78□□□□□ -1.32
PDS5B-209ENST00000498550 TOP2BQ02880 1626 aa6.78□□□□□ -1.32
PDS5B-209ENST00000498550 STRCQ7RTU9 1775 aa6.78□□□□□ -1.32
PDS5B-209ENST00000498550 UHRF1BP1LA0JNW5 1464 aa6.77□□□□□ -1.33
PDS5B-209ENST00000498550 CCDC88BA6NC98 1476 aa6.76□□□□□ -1.33
PDS5B-209ENST00000498550 SNAPC4Q5SXM2 1469 aa6.75□□□□□ -1.33
PDS5B-209ENST00000498550 BCORL1Q5H9F3 1711 aa6.74□□□□□ -1.33
PDS5B-209ENST00000498550 CFAP43Q8NDM7 1665 aa6.74□□□□□ -1.33
PDS5B-209ENST00000498550 GAPVD1Q14C86 1478 aa6.74□□□□□ -1.33
PDS5B-209ENST00000498550 KIAA0586Q9BVV6 1533 aa6.73□□□□□ -1.33
PDS5B-209ENST00000498550 RNF39Q9H2S5 420 aa6.73□□□□□ -1.33
PDS5B-209ENST00000498550 GRIN2AQ12879 1464 aa6.71□□□□□ -1.33
PDS5B-209ENST00000498550 GRIN2BQ13224 1484 aa6.71□□□□□ -1.34
PDS5B-209ENST00000498550 KDM4FA0A1W2PPD8 638 aa6.71□□□□□ -1.34
PDS5B-209ENST00000498550 RICTORQ6R327 1708 aa6.7□□□□□ -1.34
PDS5B-209ENST00000498550 ABCC2Q92887 1545 aa6.69□□□□□ -1.34
PDS5B-209ENST00000498550 U3KPZ7 1027 aaPredicted RBP6.68□□□□□ -1.34
PDS5B-209ENST00000498550 ALKQ9UM73 1620 aa6.68□□□□□ -1.34
PDS5B-209ENST00000498550 COL17A1Q9UMD9 1497 aaPredicted RBP6.68□□□□□ -1.34
PDS5B-209ENST00000498550 CUL7Q14999 1698 aa6.67□□□□□ -1.34
PDS5B-209ENST00000498550 AQRO60306 1485 aaKnown RBP eCLIP6.66□□□□□ -1.34
PDS5B-209ENST00000498550 PROM2Q8N271 834 aa6.66□□□□□ -1.34
PDS5B-209ENST00000498550 TTC37Q6PGP7 1564 aa6.65□□□□□ -1.34
PDS5B-209ENST00000498550 IQSEC2Q5JU85 1478 aa6.65□□□□□ -1.34
PDS5B-209ENST00000498550 ZCCHC11Q5TAX3 1644 aaKnown RBP6.65□□□□□ -1.35
PDS5B-209ENST00000498550 FGD5Q6ZNL6 1462 aa6.65□□□□□ -1.35
PDS5B-209ENST00000498550 ZMYM4Q5VZL5 1548 aa6.64□□□□□ -1.35
PDS5B-209ENST00000498550 REREQ9P2R6 1566 aa6.63□□□□□ -1.35
PDS5B-209ENST00000498550 ARAP3Q8WWN8 1544 aa6.63□□□□□ -1.35
PDS5B-209ENST00000498550 ZNF142P52746 1687 aaPredicted RBP6.63□□□□□ -1.35
PDS5B-209ENST00000498550 ABCA9Q8IUA7 1624 aa6.63□□□□□ -1.35
PDS5B-209ENST00000498550 ADGRL1O94910 1474 aa6.62□□□□□ -1.35
PDS5B-209ENST00000498550 MAGI3Q5TCQ9 1506 aa6.62□□□□□ -1.35
PDS5B-209ENST00000498550 LTBP4Q8N2S1 1624 aa6.62□□□□□ -1.35
PDS5B-209ENST00000498550 LMTK3Q96Q04 1460 aa6.62□□□□□ -1.35
PDS5B-209ENST00000498550 RAD54L2Q9Y4B4 1467 aa6.6□□□□□ -1.35
PDS5B-209ENST00000498550 EPRSP07814 1512 aaKnown RBP6.59□□□□□ -1.36
PDS5B-209ENST00000498550 KIF21BO75037 1637 aa6.58□□□□□ -1.36
PDS5B-209ENST00000498550 ABCA8O94911 1581 aa6.58□□□□□ -1.36
PDS5B-209ENST00000498550 PREX1Q8TCU6 1659 aa6.58□□□□□ -1.36
PDS5B-209ENST00000498550 ILDR1Q86SU0 546 aaPredicted RBP6.57□□□□□ -1.36
PDS5B-209ENST00000498550 TRIM41Q8WV44 630 aa6.57□□□□□ -1.36
PDS5B-209ENST00000498550 MROH2AA6NES4 1674 aa6.56□□□□□ -1.36
PDS5B-209ENST00000498550 UGGT2Q9NYU1 1516 aa6.56□□□□□ -1.36
PDS5B-209ENST00000498550 MKRN4PQ13434 485 aaPredicted RBP6.55□□□□□ -1.36
PDS5B-209ENST00000498550 PCF11O94913 1555 aaKnown RBP6.55□□□□□ -1.36
PDS5B-209ENST00000498550 DISP1Q96F81 1524 aa6.55□□□□□ -1.36
PDS5B-209ENST00000498550 ARHGEF40Q8TER5 1519 aa6.53□□□□□ -1.36
PDS5B-209ENST00000498550 KIAA0556O60303 1618 aa6.53□□□□□ -1.36
PDS5B-209ENST00000498550 TSPOAP1O95153 1857 aa6.53□□□□□ -1.36
PDS5B-209ENST00000498550 CTTNBP2Q8WZ74 1663 aa6.52□□□□□ -1.37
PDS5B-209ENST00000498550 FHAD1B1AJZ9 1412 aa6.51□□□□□ -1.37
PDS5B-209ENST00000498550 XIRP1Q702N8 1843 aaKnown RBP6.51□□□□□ -1.37
PDS5B-209ENST00000498550 ARHGEF12Q9NZN5 1544 aa6.51□□□□□ -1.37
PDS5B-209ENST00000498550 SAMD9Q5K651 1589 aa6.49□□□□□ -1.37
PDS5B-209ENST00000498550 MADDQ8WXG6 1647 aa6.49□□□□□ -1.37
PDS5B-209ENST00000498550 SPATA31D1Q6ZQQ2 1576 aa6.48□□□□□ -1.37
PDS5B-209ENST00000498550 SOGA1O94964 1423 aa6.47□□□□□ -1.37
PDS5B-209ENST00000498550 LRRIQ1Q96JM4 1722 aa6.45□□□□□ -1.38
PDS5B-209ENST00000498550 KDM5CP41229 1560 aa6.44□□□□□ -1.38
PDS5B-209ENST00000498550 C3P01024 1663 aa6.43□□□□□ -1.38
PDS5B-209ENST00000498550 STRCP1A6NGW2 1772 aa6.42□□□□□ -1.38
PDS5B-209ENST00000498550 PLB1Q6P1J6 1458 aa6.4□□□□□ -1.38
PDS5B-209ENST00000498550 PTPRMP28827 1452 aa6.4□□□□□ -1.39
PDS5B-209ENST00000498550 ZC3H13Q5T200 1668 aaKnown RBP6.39□□□□□ -1.39
PDS5B-209ENST00000498550 CFAP74Q9C0B2 1584 aa6.39□□□□□ -1.39
PDS5B-209ENST00000498550 PLXNC1O60486 1568 aa6.38□□□□□ -1.39
PDS5B-209ENST00000498550 POLR1AO95602 1720 aaPredicted RBP6.38□□□□□ -1.39
PDS5B-209ENST00000498550 RIMS1Q86UR5 1692 aaKnown RBP6.38□□□□□ -1.39
PDS5B-209ENST00000498550 IQGAP2Q13576 1575 aa6.37□□□□□ -1.39
PDS5B-209ENST00000498550 CEP170BQ9Y4F5 1589 aaPredicted RBP6.36□□□□□ -1.39
PDS5B-209ENST00000498550 FBXO41Q8TF61 875 aa6.36□□□□□ -1.39
PDS5B-209ENST00000498550 NEURL4Q96JN8 1562 aa6.36□□□□□ -1.39
PDS5B-209ENST00000498550 LAMC1P11047 1609 aa6.35□□□□□ -1.39
PDS5B-209ENST00000498550 SLC4A1APQ9BWU0 796 aaKnown RBP6.35□□□□□ -1.39
PDS5B-209ENST00000498550 TEX14Q8IWB6 1497 aa6.34□□□□□ -1.39
PDS5B-209ENST00000498550 FOXD4L1Q9NU39 408 aa6.34□□□□□ -1.39
PDS5B-209ENST00000498550 KDM5AP29375 1690 aaKnown RBP6.34□□□□□ -1.4
PDS5B-209ENST00000498550 DSG3P32926 999 aa6.33□□□□□ -1.4
PDS5B-209ENST00000498550 DEPDC5O75140 1603 aa6.33□□□□□ -1.4
PDS5B-209ENST00000498550 ASXL2Q76L83 1435 aa6.33□□□□□ -1.4
PDS5B-209ENST00000498550 PRG4Q92954 1404 aaPredicted RBP6.33□□□□□ -1.4
PDS5B-209ENST00000498550 AGLP35573 1532 aa6.33□□□□□ -1.4
PDS5B-209ENST00000498550 CYB5RLQ6IPT4 315 aa6.33□□□□□ -1.4
PDS5B-209ENST00000498550 CAMSAP2Q08AD1 1489 aa6.33□□□□□ -1.4
PDS5B-209ENST00000498550 SCAF1Q9H7N4 1312 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms